UHGV-1450763 (vOTU-080956)

Viral Genome: UHGV-1450763

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1450763
vOTU ID	vOTU-080956
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0251333
Associated BioSample	SAMEA4545401
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9778
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.92
Jumbo phage	No

Genome content
Genome length (bp)	36,958
GC content	51.28%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	56
CDS density	91%
Average CDS length (bps)	597.48
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1450763_1	phrog_5070	119.3	2.3e-35	N/A	unknown function
UniRef90	UHGV-1450763_1	UniRef90_A0A2V1JRG3	68.6	0.000000000000121	Phage related protein (Fragment)	N/A
eggNOG-mapper	UHGV-1450763_1	1408427.JADB01000036_gene936	80.9	7.76e-18	Homologous to orf229 gp Streptococcus thermophilus bacteriophage Sfi19 gi 9632919 ref NP_049948.1	N/A
COG	UHGV-1450763_1	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
KOfam	UHGV-1450763_3	K22299	63.2	5.8e-18	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1450763_3	phrog_8	71.4	1.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1450763_3	UniRef90_UPI0002DAE124	61.2	0.000000000192	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1450763_3	536233.CLO_1789	59.7	0.0000000000529	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1450763_3	retron_type_VI_hth_cluster2_1	43.7	0.0000000000072	N/A	Retron
Pfam	UHGV-1450763_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1450763_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1450763_3	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1450763_5	K01356	123.9	2.1e-36	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1450763_5	phrog_4	135.9	3.5e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-1450763_5	UniRef90_A0A355U1D7	152.0	2.32616e-43	HTH cro/C1-type domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1450763_5	428125.CLOLEP_01832	128.0	4.07e-34	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1450763_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1450763_5	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1450763_5	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1450763_5	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_6	phrog_27326	60.0	3.1e-17	N/A	unknown function
PHROG	UHGV-1450763_7	phrog_5059	77.4	1.7e-22	N/A	unknown function
UniRef90	UHGV-1450763_7	UniRef90_A0A7C1WS22	140.0	2.94e-37	N/A	N/A
eggNOG-mapper	UHGV-1450763_7	289376.THEYE_A1695	131.0	1.43e-34	N/A	N/A
Pfam	UHGV-1450763_7	PF08861	N/A	N/A	N/A	DUF1828
structural_annotation	UHGV-1450763_7	PF08861,PF01939,NF011271,COG1787	N/A	N/A	N/A	N/A
KOfam	UHGV-1450763_8	K06400	347.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1450763_8	phrog_95	351.5	0	integrase	integration and excision
UniRef90	UHGV-1450763_8	UniRef90_UPI0013592452	233.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1450763_8	1203606.HMPREF1526_00251	223.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1450763_8	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1450763_8	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1450763_8	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1450763_8	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1450763_8	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450763_12	1235797.C816_04174	125.0	1.32e-33	N/A	N/A
PHROG	UHGV-1450763_13	phrog_24267	64.3	2.3e-18	N/A	unknown function
UniRef90	UHGV-1450763_13	UniRef90_UPI00140757B2	59.3	0.0000000751	tail fiber protein	N/A
eggNOG-mapper	UHGV-1450763_13	1399942.U3PFX4_9CAUD	85.9	1.68e-17	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1450763_13	COG4675	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450763_15	PF06013,MF_00683,NF003844,COG4842	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450763_16	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-1450763_18	K07039	44.2	0.0000000000028	N/A	N/A
UniRef90	UHGV-1450763_18	UniRef90_A0A1G0RDF6	133.0	3.5e-36	Peptidase A2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450763_18	565655.ECBG_02821	57.8	0.00000024	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	N/A
Pfam	UHGV-1450763_18	PF13650	N/A	N/A	Aspartyl protease	Asp_protease_2
Pfam	UHGV-1450763_18	PF02810	N/A	N/A	SEC-C motif	SEC-C
COG	UHGV-1450763_18	COG0653	N/A	N/A	Preprotein translocase subunit SecA (ATPase, RNA helicase)	N/A
structural_annotation	UHGV-1450763_18	PF13650,TIGR03698,COG5550	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450763_19	PF18929	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450763_21	PF06199,PF05561,MF_01457,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450763_22	UniRef90_A0A2Z4GU91	75.1	0.00000000000000271	Minor capsid protein	N/A
structural_annotation	UHGV-1450763_23	PF07405,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_25	phrog_6717	69.9	1.7e-20	N/A	unknown function
UniRef90	UHGV-1450763_25	UniRef90_A0A2Z4GUB1	84.3	5.66e-17	Crystallin beta/gamma motif-containing protein	N/A
eggNOG-mapper	UHGV-1450763_25	306264.CUP0526	80.5	0.00000000000000679	N/A	N/A
Pfam	UHGV-1450763_25	PF18809	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1	PBECR1
UniRef90	UHGV-1450763_26	UniRef90_A0A2Z4GUC0	637.0	0	Chitobiase/beta-hexosaminidase	N/A
eggNOG-mapper	UHGV-1450763_26	743719.PaelaDRAFT_3774	62.0	0.000000385	beta-lactamase	N/A
Pfam	UHGV-1450763_26	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
COG	UHGV-1450763_26	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1450763_26	PF05065,PF13620,MF_04119,TIGR04387,TIGR04134,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_28	phrog_13543	87.3	8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1450763_28	1226322.HMPREF1545_00787	103.0	7.18e-22	N/A	N/A
PHROG	UHGV-1450763_29	phrog_581	88.7	5e-26	minor head protein	head and packaging
UniRef90	UHGV-1450763_29	UniRef90_A0A2Z4GUI4	246.0	0	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1450763_29	997296.PB1_16234	62.4	0.0000000647	Phage minor capsid protein 2	N/A
Pfam	UHGV-1450763_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1450763_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450763_29	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_30	phrog_533	118.2	5.2e-35	portal protein	head and packaging
UniRef90	UHGV-1450763_30	UniRef90_A0A2Z4GUT7	631.0	0	Portal protein	N/A
structural_annotation	UHGV-1450763_30	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1450763_31	K06909	116.6	2.9e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1450763_31	phrog_2	71.8	1.4e-20	terminase large subunit	head and packaging
UniRef90	UHGV-1450763_31	UniRef90_A0A3D2E0R8	313.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450763_31	66692.ABC2839	66.2	0.0000000069	Terminase RNAseH like domain	N/A
Pfam	UHGV-1450763_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1450763_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1450763_31	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1450763_32	K07474	92.4	9.9e-27	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1450763_32	phrog_51	95.6	6.3e-28	terminase small subunit	head and packaging
UniRef90	UHGV-1450763_32	UniRef90_UPI001CBDFD5A	93.6	4.36e-22	terminase small subunit	N/A
eggNOG-mapper	UHGV-1450763_32	66692.ABC2840	79.7	2.97e-17	Terminase small subunit	N/A
Pfam	UHGV-1450763_32	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1450763_32	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1450763_32	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_33	phrog_36	55.1	0.0000000000000016	transcriptional regulator	transcription regulation
structural_annotation	UHGV-1450763_33	PF06530,PF21662,NF007224,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_34	phrog_16123	93.9	2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1450763_34	1273103.NM10_00919	98.2	4.53e-24	N/A	N/A
Pfam	UHGV-1450763_35	PF12840	N/A	N/A	Helix-turn-helix domain	HTH_20
eggNOG-mapper	UHGV-1450763_38	1235835.C814_01168	54.3	0.00000000787	N/A	N/A
KOfam	UHGV-1450763_40	K00390	142.0	4.49957e-42	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1450763_40	phrog_424	138.5	3.89995e-41	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1450763_40	UniRef90_A0A3E3DCH2	279.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-1450763_40	411902.CLOBOL_06768	220.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-1450763_40	BrxP_00001	67.5	4.5e-20	BrxP	BREX
Pfam	UHGV-1450763_40	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1450763_40	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1450763_40	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_41	phrog_2562	103.3	3e-30	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450763_41	UniRef90_A0A3D4VRX2	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450763_41	1231377.C426_1964	70.1	0.0000000000443	N/A	N/A
Pfam	UHGV-1450763_41	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1450763_41	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1450763_41	PF14297,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-1450763_42	K03111	157.5	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1450763_42	phrog_44	160.0	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450763_42	UniRef90_A0A3D4S8G3	155.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1450763_42	1118054.CAGW01000038_gene940	132.0	1.81e-37	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1450763_42	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1450763_42	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1450763_42	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1450763_42	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1450763_42	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1450763_44	K01160	55.3	0.0000000000000017	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1450763_44	phrog_140	124.1	8.6e-37	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450763_44	UniRef90_UPI001915D0A5	134.0	6.81e-38	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1450763_44	665956.HMPREF1032_03604	125.0	4.85e-35	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1450763_44	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1450763_44	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1450763_44	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_45	phrog_398	196.3	0	N/A	unknown function
UniRef90	UHGV-1450763_45	UniRef90_UPI00048A0A8A	214.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-1450763_45	1200557.JHWV01000006_gene1749	214.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-1450763_45	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1450763_45	PF16784	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450763_46	718252.FP2_01050	140.0	3.77e-39	N/A	N/A
structural_annotation	UHGV-1450763_46	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_47	phrog_124	122.5	3.4e-36	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450763_47	UniRef90_A0A7X7IIE7	348.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1450763_47	445972.ANACOL_00146	226.0	0	AAA domain	N/A
Pfam	UHGV-1450763_47	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1450763_47	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-1450763_47	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1450763_52	phrog_8	43.6	0.0000000000065	transcriptional regulator	transcription regulation
UniRef90	UHGV-1450763_52	UniRef90_A0A316QMP7	66.2	0.000000000000301	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1450763_52	1211035.CD30_06305	56.2	0.00000000144	XRE family transcriptional regulator	N/A
Pfam	UHGV-1450763_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1450763_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-1450763_55	UniRef90_A0A354UNG6	60.5	0.000000000138	Transcriptional regulator	N/A
Pfam	UHGV-1450763_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1450763_55	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1450763_56	phrog_7964	110.3	1.2e-32	N/A	unknown function
UniRef90	UHGV-1450763_56	UniRef90_A0A377IBZ5	61.6	0.000000000575	Intrrupted gp229, phage associated	N/A
eggNOG-mapper	UHGV-1450763_56	411470.RUMGNA_02189	80.5	7.88e-17	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-1450763_56	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-1450763_56	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A