UHGV-1454954 (vOTU-072880)

Viral Genome: UHGV-1454954

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1454954
vOTU ID	vOTU-072880
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0097201
Associated BioSample	SAMEA2338729
Viral genome confidence	Confident

Quality assessment
CheckV method	ITR
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9773
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.71
Jumbo phage	No

Genome content
Genome length (bp)	15,426
GC content	39.54%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	21
CDS density	94%
Average CDS length (bps)	687.14
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1454954_3	K07273	117.7	1.2e-34	acm; lysozyme	N/A
PHROG	UHGV-1454954_3	phrog_291	106.3	3.8e-31	endolysin	lysis
UniRef90	UHGV-1454954_3	UniRef90_R5MT05	469.0	0	Glycosyl hydrolase family 25/peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-1454954_3	697329.Rumal_2219	76.6	0.000000000000505	hydrolase, family 25	N/A
Pfam	UHGV-1454954_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1454954_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1454954_3	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1454954_4	phrog_1863	52.1	0.0000000000000074	N/A	unknown function
PHROG	UHGV-1454954_5	phrog_1299	41.0	0.000000000022	holin	lysis
UniRef90	UHGV-1454954_5	UniRef90_A0A1Y4F2E8	53.9	0.000000123	Enolase	N/A
eggNOG-mapper	UHGV-1454954_5	411461.DORFOR_00721	50.4	0.000000482	N/A	N/A
Pfam	UHGV-1454954_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1454954_5	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1454954_6	phrog_11037	134.3	8.9e-40	N/A	unknown function
UniRef90	UHGV-1454954_6	UniRef90_R5N5I4	468.0	0	Morphogenesis protein	N/A
eggNOG-mapper	UHGV-1454954_6	10753.B7SSN4_BPNF	151.0	5.57002e-41	N/A	N/A
Pfam	UHGV-1454954_6	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
structural_annotation	UHGV-1454954_6	PF18013	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1454954_7	PF01105,NF038127,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-1454954_10	phrog_3225	163.9	0	adaptor Ad4	connector
UniRef90	UHGV-1454954_10	UniRef90_R5N6P4	415.0	0	Lower collar	N/A
PHROG	UHGV-1454954_11	phrog_2038	245.6	0	upper collar connector	connector
UniRef90	UHGV-1454954_11	UniRef90_R5N5I0	601.0	0	Connector protein	N/A
eggNOG-mapper	UHGV-1454954_11	10753.B7SSN1_BPNF	120.0	4.59e-29	Phage Connector (GP10)	N/A
Pfam	UHGV-1454954_11	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-1454954_11	PF05352,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1454954_12	phrog_2248	405.0	0	tail protein	tail
UniRef90	UHGV-1454954_12	UniRef90_R5MM56	914.0	0	Tail protein	N/A
eggNOG-mapper	UHGV-1454954_12	10756.DIT9_BPPH2	128.0	1.65e-28	N/A	N/A
Pfam	UHGV-1454954_12	PF16838	N/A	N/A	Caudoviral major tail protein N-terminus	Caud_tail_N
Pfam	UHGV-1454954_12	PF20934	N/A	N/A	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
structural_annotation	UHGV-1454954_12	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-1454954_13	phrog_2006	338.7	0	major head protein	head and packaging
UniRef90	UHGV-1454954_13	UniRef90_R5MSZ3	767.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-1454954_13	12345.CAPSD_BPGA1	152.0	1.22e-38	T=13 icosahedral viral capsid	N/A
structural_annotation	UHGV-1454954_13	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454954_14	UniRef90_R5MMY2	116.0	1.52e-32	AXH domain-containing protein	N/A
PHROG	UHGV-1454954_15	phrog_2150	300.1	0	terminase	head and packaging
UniRef90	UHGV-1454954_15	UniRef90_R5N6N9	702.0	0	DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-1454954_15	10756.PKG16_BPPH2	104.0	1.42e-22	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-1454954_15	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-1454954_15	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-1454954_16	PF17427	N/A	N/A	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
structural_annotation	UHGV-1454954_16	PF17427	N/A	N/A	N/A	N/A
PHROG	UHGV-1454954_17	phrog_6370	40.2	0.000000000045	dsDNA binding protein	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1454954_17	PF17548,MF_00273	N/A	N/A	N/A	N/A
KOfam	UHGV-1454954_18	K21237	452.3	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-1454954_18	phrog_1907	506.7	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1454954_18	UniRef90_R5N5H3	1241.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1454954_18	10753.DPOL_BPNF	327.0	0	nucleotide binding	N/A
Pfam	UHGV-1454954_18	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-1454954_18	PF03175,MF_04055,NF004415,COG0417	N/A	N/A	N/A	N/A