UHGV-1454999 (vOTU-089469)

Viral Genome: UHGV-1454999

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1454999
vOTU ID	vOTU-089469
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0296989
Associated BioSample	SAMEA3136693
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.67 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9802
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.15
Jumbo phage	No

Genome content
Genome length (bp)	45,856
GC content	40.16%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	87%
Average CDS length (bps)	561.13
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1454999_1	UniRef90_A0A3E4PS02	133.0	8.71e-39	CPBP family intramembrane metalloprotease (Fragment)	N/A
eggNOG-mapper	UHGV-1454999_1	742765.HMPREF9457_01634	133.0	5.21e-37	CAAX protease self-immunity	N/A
COG	UHGV-1454999_1	COG1266	N/A	N/A	Membrane protease YdiL, CAAX protease family	N/A
UniRef90	UHGV-1454999_2	UniRef90_UPI001D01D5CE	73.9	1.6e-16	N/A	N/A
Pfam	UHGV-1454999_2	PF19483	N/A	N/A	N/A	DUF6019
KOfam	UHGV-1454999_3	K14059	165.3	0	int; integrase	N/A
PHROG	UHGV-1454999_3	phrog_1	146.5	2.00386e-43	integrase	integration and excision
UniRef90	UHGV-1454999_3	UniRef90_A0A373MXN6	706.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1454999_3	1304866.K413DRAFT_1180	357.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1454999_3	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1454999_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1454999_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1454999_3	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_5	phrog_806	104.7	9.5e-31	N/A	unknown function
UniRef90	UHGV-1454999_5	UniRef90_UPI0006C1B925	349.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454999_5	397290.C810_05150	204.0	0	N/A	N/A
Pfam	UHGV-1454999_5	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1454999_5	PF11611,MF_00791,NF041178,COG2967	N/A	N/A	N/A	N/A
Pfam	UHGV-1454999_6	PF12773	N/A	N/A	Double zinc ribbon	DZR
PHROG	UHGV-1454999_7	phrog_20886	112.3	8e-34	N/A	unknown function
UniRef90	UHGV-1454999_7	UniRef90_UPI000C757FC8	77.0	3.84e-16	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1454999_7	411462.DORLON_00820	140.0	2.59997e-41	N/A	N/A
structural_annotation	UHGV-1454999_7	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1454999_8	K22299	42.0	0.000000000018	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1454999_8	phrog_8	74.8	1.5e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1454999_8	UniRef90_UPI001D02143A	246.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1454999_8	411462.DORLON_00819	213.0	0	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1454999_8	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1454999_8	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1454999_8	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454999_9	UniRef90_UPI0018AA5D9A	132.0	2.49e-39	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1454999_9	1127131.WEISSC39_00160	51.2	0.000000266	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1454999_9	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1454999_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1454999_9	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454999_10	UniRef90_A0A3E4LWT8	116.0	1.69e-32	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-1454999_10	PF21291,NF041951,COG1513	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_13	phrog_674	179.9	0	N/A	unknown function
UniRef90	UHGV-1454999_13	UniRef90_A0A373MX71	409.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454999_13	1304866.K413DRAFT_1195	154.0	7.56981e-42	N/A	N/A
Pfam	UHGV-1454999_13	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1454999_13	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_14	phrog_155	141.3	6.19934e-42	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1454999_14	UniRef90_UPI001EDDFED5	392.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1454999_14	1298920.KI911353_gene4870	149.0	4.38046e-42	ERF superfamily	N/A
Pfam	UHGV-1454999_14	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1454999_14	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_15	phrog_72	54.1	0.0000000000000014	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1454999_15	411470.RUMGNA_02194	125.0	8.41e-34	N/A	N/A
structural_annotation	UHGV-1454999_15	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_16	phrog_2113	43.9	0.0000000000026	N/A	unknown function
UniRef90	UHGV-1454999_16	UniRef90_A0A357NGS2	68.6	0.00000000000566	HTH_11 domain-containing protein	N/A
structural_annotation	UHGV-1454999_16	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_17	phrog_244	82.2	7.9e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1454999_17	33035.JPJF01000122_gene2460	154.0	0	N/A	N/A
structural_annotation	UHGV-1454999_17	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_18	phrog_2514	93.5	2.5e-27	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1454999_18	UniRef90_A0A174WT25	172.0	0	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-1454999_18	742733.HMPREF9469_01845	156.0	9.10844e-44	N/A	N/A
structural_annotation	UHGV-1454999_18	PF10771,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454999_20	UniRef90_UPI0006C0F90C	298.0	0	N/A	N/A
Pfam	UHGV-1454999_20	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1454999_20	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_24	phrog_15077	57.0	4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1454999_24	742740.HMPREF9474_03494	73.9	0.000000000000702	N/A	N/A
eggNOG-mapper	UHGV-1454999_25	1033733.CAEK01000007_gene1661	48.9	0.00000165	N/A	N/A
KOfam	UHGV-1454999_26	K00390	73.7	1.2e-21	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1454999_26	phrog_424	149.6	1.82169e-44	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1454999_26	UniRef90_UPI0018A95D39	602.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1454999_26	742765.HMPREF9457_03403	412.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1454999_26	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1454999_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1454999_26	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1454999_28	K00558	232.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1454999_28	phrog_116	257.0	0	DNA methyltransferase	other
UniRef90	UHGV-1454999_28	UniRef90_C0BC27	895.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1454999_28	1499683.CCFF01000017_gene2594	466.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1454999_28	MTase_II_00058	194.7	0	Type II methyltransferase	RM
Pfam	UHGV-1454999_28	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1454999_28	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1454999_28	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1454999_28	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_33	phrog_2600	113.4	2.5e-33	N/A	unknown function
UniRef90	UHGV-1454999_33	UniRef90_A0A401UUL1	155.0	2.84464e-43	N/A	N/A
eggNOG-mapper	UHGV-1454999_33	1298920.KI911353_gene2720	170.0	0	N/A	N/A
PHROG	UHGV-1454999_34	phrog_9822	164.7	0	N/A	unknown function
structural_annotation	UHGV-1454999_36	PF06442,MF_01194,NF000331,COG4014	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1454999_37	887325.HMPREF0381_0090	94.4	4.92e-24	N/A	N/A
PHROG	UHGV-1454999_38	phrog_15198	45.0	0.0000000000015	N/A	unknown function
UniRef90	UHGV-1454999_38	UniRef90_UPI001EDF8197	287.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454999_38	742723.HMPREF9477_00919	52.8	0.00000165	N/A	N/A
Pfam	UHGV-1454999_38	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1454999_38	PF04448,NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1454999_40	PF10400	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_41	phrog_22292	80.7	9.1e-25	N/A	unknown function
UniRef90	UHGV-1454999_43	UniRef90_UPI000CF8F0F1	214.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454999_43	1262914.BN533_01384	83.6	4.31e-19	N/A	N/A
Pfam	UHGV-1454999_43	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1454999_43	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1454999_43	PF07866,COG4728	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_45	phrog_33130	99.5	1.3e-29	N/A	unknown function
structural_annotation	UHGV-1454999_45	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-1454999_47	K07474	106.4	5.3e-31	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1454999_47	phrog_51	112.1	4.4e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1454999_47	UniRef90_A0A373MWB9	298.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1454999_47	1235800.C819_00494	105.0	4.17e-27	Terminase small subunit	N/A
Pfam	UHGV-1454999_47	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1454999_47	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1454999_47	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1454999_48	K06909	118.3	7.3e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1454999_48	phrog_10250	163.6	0	N/A	unknown function
UniRef90	UHGV-1454999_48	UniRef90_A0A373MY72	849.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1454999_48	397290.C810_05187	688.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1454999_48	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1454999_48	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1454999_48	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1454999_48	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_49	phrog_533	256.1	0	portal protein	head and packaging
UniRef90	UHGV-1454999_49	UniRef90_A0A173R9C0	345.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1454999_49	476272.RUMHYD_01758	341.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1454999_49	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_50	phrog_1233	78.1	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1454999_50	936375.HMPREF1152_1074	84.7	7.37e-20	N/A	N/A
structural_annotation	UHGV-1454999_50	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_51	phrog_1048	137.4	1.96182e-44	N/A	unknown function
UniRef90	UHGV-1454999_51	UniRef90_A0A373MX10	247.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454999_51	457412.RSAG_01107	128.0	2.66e-35	N/A	N/A
Pfam	UHGV-1454999_51	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1454999_51	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1454999_51	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_52	phrog_355	64.3	1.6e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1454999_52	UniRef90_A0A396KGT7	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454999_52	97138.C820_00250	128.0	2.77e-37	N/A	N/A
Pfam	UHGV-1454999_52	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1454999_52	PF14359,COG3613	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1454999_53	COG4446	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_55	phrog_581	249.3	0	minor head protein	head and packaging
UniRef90	UHGV-1454999_55	UniRef90_A0A373MXM0	747.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1454999_55	476272.RUMHYD_01761	468.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1454999_55	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1454999_55	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1454999_55	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_56	phrog_194	67.2	1.1e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-1454999_56	UniRef90_UPI001C1258D3	73.2	0.00000000000133	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1454999_56	397290.C810_05223	92.4	1.43e-20	Phage minor structural protein GP20	N/A
Pfam	UHGV-1454999_56	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1454999_56	PF06810	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454999_57	UniRef90_A0A0M2NI16	304.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-1454999_57	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_59	phrog_541	98.5	4.2e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-1454999_59	476272.RUMHYD_01778	205.0	0	N/A	N/A
PHROG	UHGV-1454999_61	phrog_3366	106.0	2.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-1454999_61	476272.RUMHYD_01779	192.0	0	N/A	N/A
structural_annotation	UHGV-1454999_61	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_62	phrog_556	71.3	9.1e-21	minor head protein	head and packaging
UniRef90	UHGV-1454999_62	UniRef90_UPI000E4989EB	150.0	1.16308e-43	minor capsid protein	N/A
eggNOG-mapper	UHGV-1454999_62	476272.RUMHYD_01780	209.0	0	N/A	N/A
Pfam	UHGV-1454999_62	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1454999_62	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_63	phrog_3266	84.6	8.1e-25	tail completion	connector
eggNOG-mapper	UHGV-1454999_63	476272.RUMHYD_01781	239.0	0	N/A	N/A
structural_annotation	UHGV-1454999_63	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_64	phrog_3099	117.2	1.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-1454999_64	476272.RUMHYD_01782	250.0	0	N/A	N/A
structural_annotation	UHGV-1454999_64	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_65	phrog_11299	116.5	1.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-1454999_65	33035.JPJF01000106_gene3125	102.0	6.39e-26	N/A	N/A
structural_annotation	UHGV-1454999_65	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_66	phrog_706	123.8	7.1e-37	N/A	unknown function
UniRef90	UHGV-1454999_66	UniRef90_UPI00156F9D1C	283.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1454999_66	411459.RUMOBE_01383	211.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1454999_66	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1454999_66	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-1454999_67	K03529	40.6	0.00000000001	smc; chromosome segregation protein	N/A
PHROG	UHGV-1454999_67	phrog_1535	236.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1454999_67	UniRef90_A0A173R880	357.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1454999_67	476272.RUMHYD_01785	445.0	0	phage tail tape measure protein	N/A
COG	UHGV-1454999_67	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_68	phrog_1194	58.6	9.9e-17	N/A	unknown function
structural_annotation	UHGV-1454999_68	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_69	phrog_6616	470.3	0	tail protein	tail
UniRef90	UHGV-1454999_69	UniRef90_UPI0015714EA8	780.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1454999_69	357276.EL88_12830	274.0	0	Phage minor structural protein	N/A
COG	UHGV-1454999_69	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1454999_69	PF05113,PF01835,PF03921,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1454999_70	phrog_18444	82.8	2.2e-24	N/A	unknown function