UHGV-1456429 (vOTU-075140)

Viral Genome: UHGV-1456429

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1456429
vOTU ID	vOTU-075140
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0288469
Associated BioSample	SAMEA3664610
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9769
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	46.27
Jumbo phage	No

Genome content
Genome length (bp)	43,932
GC content	47.35%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	90%
Average CDS length (bps)	555.68
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1456429_2	K01449	50.5	0.000000000000034	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1456429_2	phrog_30550	145.1	2.60642e-43	N/A	unknown function
UniRef90	UHGV-1456429_2	UniRef90_R6CIF0	125.0	1.95e-33	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1456429_2	1519439.JPJG01000077_gene920	107.0	1.39e-27	Cell Wall Hydrolase	N/A
Pfam	UHGV-1456429_2	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1456429_2	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
KOfam	UHGV-1456429_3	K00558	43.2	0.0000000000026	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1456429_3	phrog_757	114.3	8.2e-34	DNA methyltransferase	other
UniRef90	UHGV-1456429_3	UniRef90_A0A8D9PDD1	379.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-1456429_3	622312.ROSEINA2194_01264	369.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-1456429_3	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1456429_3	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1456429_3	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_5	phrog_38832	41.8	0.00000000000043	N/A	unknown function
eggNOG-mapper	UHGV-1456429_5	1232443.BAIA02000078_gene48	58.5	0.00000000211	N/A	N/A
PHROG	UHGV-1456429_8	phrog_10714	47.8	0.00000000000024	N/A	unknown function
structural_annotation	UHGV-1456429_8	PF15188	N/A	N/A	N/A	N/A
Pfam	UHGV-1456429_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1456429_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1456429_11	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_14	phrog_18716	140.7	3.50044e-42	N/A	unknown function
UniRef90	UHGV-1456429_14	UniRef90_A0A1J0GJP7	142.0	1.24001e-41	N/A	N/A
eggNOG-mapper	UHGV-1456429_14	665959.HMPREF1013_00856	113.0	7.24e-31	N/A	N/A
Pfam	UHGV-1456429_14	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1456429_14	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_17	phrog_2872	218.5	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1456429_17	UniRef90_A0A8J6P193	270.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1456429_17	1449050.JNLE01000005_gene3946	221.0	0	AAA domain	N/A
Pfam	UHGV-1456429_17	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1456429_17	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_19	phrog_18107	70.1	3.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-1456429_19	476272.RUMHYD_02831	169.0	0	N/A	N/A
structural_annotation	UHGV-1456429_19	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_20	phrog_3490	113.1	2.1e-33	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1456429_20	UniRef90_R6N0P8	214.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1456429_20	1304866.K413DRAFT_0825	164.0	0	resolution of meiotic recombination intermediates	N/A
Pfam	UHGV-1456429_20	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-1456429_20	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-1456429_20	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1456429_21	K02316	68.2	1.2e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1456429_21	phrog_11992	109.4	3.8e-32	N/A	unknown function
UniRef90	UHGV-1456429_21	UniRef90_A0A1K1PGY2	104.0	1.07e-24	CHC2 zinc finger	N/A
eggNOG-mapper	UHGV-1456429_21	697329.Rumal_0697	102.0	1.21e-24	CHC2 zinc finger domain protein	N/A
PADLOC	UHGV-1456429_21	drt-cluster192	51.8	0.000000000000019	DRT	DRT
Pfam	UHGV-1456429_21	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1456429_21	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1456429_21	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_22	phrog_256	321.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1456429_22	UniRef90_A0A1V5XFC1	565.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-1456429_22	1235793.C809_02292	239.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1456429_22	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1456429_22	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1456429_22	PF05272,MF_00016,NF005477,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_25	phrog_606	47.7	0.00000000000011	terminase small subunit	head and packaging
UniRef90	UHGV-1456429_25	UniRef90_UPI001D08D6B6	265.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1456429_25	1280663.ATVR01000009_gene2143	70.5	0.00000000000132	N/A	N/A
Pfam	UHGV-1456429_25	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1456429_25	PF16677	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1456429_26	PF14201	N/A	N/A	N/A	N/A
KOfam	UHGV-1456429_27	K06400	286.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1456429_27	phrog_95	283.6	0	integrase	integration and excision
UniRef90	UHGV-1456429_27	UniRef90_A0A7X7CF84	206.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1456429_27	1203606.HMPREF1526_00251	203.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1456429_27	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1456429_27	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1456429_27	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1456429_27	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1456429_28	689781.AUJX01000010_gene488	58.5	0.000000693	protein involved in cytokinesis, contains TGc (transglutaminase protease-like) domain	N/A
Pfam	UHGV-1456429_28	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
COG	UHGV-1456429_28	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1456429_28	PF12869,MF_00720,NF040991,COG4085	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_29	phrog_1233	69.4	5.5e-20	N/A	unknown function
UniRef90	UHGV-1456429_29	UniRef90_UPI001C39EFB9	111.0	2.25e-29	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-1456429_29	1232453.BAIF02000011_gene3355	105.0	7.32e-28	N/A	N/A
PHROG	UHGV-1456429_30	phrog_38	186.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1456429_30	UniRef90_A0A810QA10	660.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1456429_30	1298920.KI911353_gene2682	472.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1456429_30	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1456429_30	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1456429_30	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_31	phrog_64	209.6	0	portal protein	head and packaging
UniRef90	UHGV-1456429_31	UniRef90_UPI001C02F349	762.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1456429_31	1123263.AUKY01000015_gene1609	423.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1456429_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1456429_31	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_33	phrog_1328	126.7	1.3e-37	major head protein	head and packaging
UniRef90	UHGV-1456429_33	UniRef90_UPI00164DD2D5	598.0	0	N/A	N/A
eggNOG-mapper	UHGV-1456429_33	665956.HMPREF1032_03619	238.0	0	N/A	N/A
Pfam	UHGV-1456429_33	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1456429_33	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_34	phrog_132	42.6	0.000000000009	head-tail adaptor	connector
UniRef90	UHGV-1456429_34	UniRef90_UPI00164E20D5	153.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1456429_34	1298920.KI911353_gene2658	64.3	0.00000000000622	N/A	N/A
Pfam	UHGV-1456429_34	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1456429_34	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1456429_35	1121866.AUGK01000003_gene1432	82.0	2.87e-18	N/A	N/A
structural_annotation	UHGV-1456429_37	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_38	phrog_158	57.0	3.5e-16	major tail protein	tail
UniRef90	UHGV-1456429_38	UniRef90_UPI00164D954A	252.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1456429_38	1232453.BAIF02000058_gene1634	101.0	1.57e-25	N/A	N/A
Pfam	UHGV-1456429_38	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1456429_38	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1456429_39	UniRef90_UPI00164D364F	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1456429_39	469596.HMPREF9488_01311	92.0	1.07e-22	N/A	N/A
Pfam	UHGV-1456429_39	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1456429_39	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1456429_40	1121333.JMLH01000047_gene1011	75.5	0.0000000000000018	N/A	N/A
PHROG	UHGV-1456429_41	phrog_1535	160.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1456429_41	UniRef90_A0A1C6L0H4	668.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1456429_41	1121866.AUGK01000003_gene1437	277.0	0	phage tail tape measure protein	N/A
COG	UHGV-1456429_41	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1456429_41	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_42	phrog_1194	94.9	5.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-1456429_42	742740.HMPREF9474_03515	137.0	3.59e-40	N/A	N/A
structural_annotation	UHGV-1456429_42	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_43	phrog_13879	272.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1456429_43	665956.HMPREF1032_03630	211.0	0	N/A	N/A
structural_annotation	UHGV-1456429_43	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_44	phrog_18725	54.7	1.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-1456429_44	1226322.HMPREF1545_00062	110.0	5.04e-28	N/A	N/A
PHROG	UHGV-1456429_46	phrog_5302	139.4	1.70006e-41	tail protein	tail
UniRef90	UHGV-1456429_46	UniRef90_L0KWD4	103.0	2.85e-20	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1456429_46	935948.KE386495_gene1318	65.5	0.00000000201	N/A	N/A
structural_annotation	UHGV-1456429_46	PF14686,TIGR03000,COG1262	N/A	N/A	N/A	N/A
UniRef90	UHGV-1456429_48	UniRef90_R6I1X1	191.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1456429_48	552398.HMPREF0866_01159	102.0	8.33e-26	N/A	N/A
PHROG	UHGV-1456429_49	phrog_21357	53.5	0.0000000000000025	endolysin	lysis
UniRef90	UHGV-1456429_49	UniRef90_UPI001BB47323	96.7	1.03e-20	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1456429_49	693746.OBV_22650	72.0	0.00000000000285	CHAP domain	N/A
Pfam	UHGV-1456429_49	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1456429_49	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1456429_49	PF10030,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_50	phrog_1863	64.6	8.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1456429_50	748224.HMPREF9436_01412	94.4	1.52e-24	N/A	N/A
PHROG	UHGV-1456429_51	phrog_10091	107.7	7.7e-32	holin	lysis
UniRef90	UHGV-1456429_51	UniRef90_A0A1Y4RHF4	129.0	1.52e-37	Phage holin	N/A
eggNOG-mapper	UHGV-1456429_51	97139.C824_05950	113.0	6.09e-32	Bacteriophage holin	N/A
Pfam	UHGV-1456429_51	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1456429_51	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1456429_51	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1456429_51	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_54	phrog_22984	48.6	0.00000000000015	N/A	unknown function
PHROG	UHGV-1456429_55	phrog_16490	51.8	0.000000000000016	N/A	unknown function
structural_annotation	UHGV-1456429_56	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1456429_57	UniRef90_A0A7M1RTM1	70.9	0.00000000000394	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1456429_57	1378168.N510_03079	73.6	0.000000000000168	N/A	N/A
KOfam	UHGV-1456429_58	K14059	92.7	5.7e-27	int; integrase	N/A
PHROG	UHGV-1456429_58	phrog_1	113.5	2.2e-33	integrase	integration and excision
UniRef90	UHGV-1456429_58	UniRef90_R6I1Y0	487.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1456429_58	246199.CUS_5913	101.0	2.29e-21	Phage integrase family	N/A
Pfam	UHGV-1456429_58	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1456429_58	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1456429_58	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1456429_59	UniRef90_A0A8D9UHA6	65.5	0.000000000821	Helix-turn-helix XRE-family like protein	N/A
COG	UHGV-1456429_59	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1456429_59	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_60	phrog_6148	66.7	2.2e-19	beta-lactamase-inhibitor protein BLIP	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1456429_60	UniRef90_A0A4Y9AIU6	65.5	0.00000000506	N/A	N/A
eggNOG-mapper	UHGV-1456429_60	1449050.JNLE01000005_gene4075	84.3	7.87e-18	N/A	N/A
Pfam	UHGV-1456429_60	PF07467	N/A	N/A	Beta-lactamase inhibitor (BLIP)	BLIP
KOfam	UHGV-1456429_62	K22300	53.0	0.0000000000000077	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1456429_62	phrog_3	45.1	0.0000000000035	transcriptional repressor	transcription regulation
UniRef90	UHGV-1456429_62	UniRef90_A0A3A9I218	127.0	2.14e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1456429_62	748224.HMPREF9436_01444	115.0	2.42e-31	N/A	N/A
Pfam	UHGV-1456429_62	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1456429_62	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1456429_62	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1456429_64	UniRef90_UPI000F0633F9	77.8	2e-17	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1456429_64	693746.OBV_43260	78.6	1.7e-18	N/A	N/A
structural_annotation	UHGV-1456429_64	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
Pfam	UHGV-1456429_70	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1456429_70	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1456429_71	phrog_14105	50.4	0.000000000000026	N/A	unknown function
eggNOG-mapper	UHGV-1456429_71	526218.Sterm_0811	65.1	0.000000000467	dextransucrase activity	N/A
COG	UHGV-1456429_71	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A