UHGV-1461267 (vOTU-035429)

Viral Genome: UHGV-1461267

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1461267
vOTU ID	vOTU-035429
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0166119
Associated BioSample	SAMEA1906463
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.05 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9821
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.61
Jumbo phage	No

Genome content
Genome length (bp)	22,656
GC content	52.60%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	33
CDS density	97%
Average CDS length (bps)	667.27
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1461267_2	phrog_937	52.1	0.000000000000012	hemolysin	other
eggNOG-mapper	UHGV-1461267_3	1235797.C816_04174	139.0	3.12e-39	N/A	N/A
PHROG	UHGV-1461267_4	phrog_10993	244.6	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-1461267_4	UniRef90_A0A350TI55	277.0	0	N/A	N/A
eggNOG-mapper	UHGV-1461267_4	718252.FP2_16970	216.0	0	N/A	N/A
Pfam	UHGV-1461267_4	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1461267_4	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_5	phrog_37900	58.2	6.7e-22	N/A	unknown function
UniRef90	UHGV-1461267_5	UniRef90_UPI00051B4A1C	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-1461267_5	1519439.JPJG01000060_gene1894	259.0	0	N/A	N/A
Pfam	UHGV-1461267_5	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1461267_5	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1461267_5	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1461267_6	742733.HMPREF9469_05008	52.8	0.000000294	N/A	N/A
PHROG	UHGV-1461267_7	phrog_13589	142.9	1.60028e-42	N/A	unknown function
eggNOG-mapper	UHGV-1461267_7	428125.CLOLEP_01434	193.0	0	N/A	N/A
PHROG	UHGV-1461267_8	phrog_31538	48.3	0.00000000000022	N/A	unknown function
eggNOG-mapper	UHGV-1461267_8	742740.HMPREF9474_02274	50.8	0.00000148	N/A	N/A
structural_annotation	UHGV-1461267_9	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1461267_10	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_11	phrog_18725	57.4	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1461267_11	1226322.HMPREF1545_00062	83.6	4.59e-18	N/A	N/A
PHROG	UHGV-1461267_12	phrog_13879	247.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1461267_12	1226322.HMPREF1545_00061	362.0	0	N/A	N/A
structural_annotation	UHGV-1461267_12	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_13	phrog_1194	77.3	1.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1461267_13	411902.CLOBOL_00125	115.0	2.23e-31	N/A	N/A
structural_annotation	UHGV-1461267_13	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_14	phrog_1535	117.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1461267_14	UniRef90_A0A810PX76	241.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1461267_14	1235797.C816_04182	387.0	0	SLT domain	N/A
COG	UHGV-1461267_14	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_15	phrog_706	117.9	7.2e-35	N/A	unknown function
UniRef90	UHGV-1461267_15	UniRef90_UPI000682A80B	220.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1461267_15	693746.OBV_18170	210.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1461267_15	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1461267_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_16	phrog_11299	65.3	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1461267_16	693746.OBV_18160	122.0	5.4e-34	N/A	N/A
structural_annotation	UHGV-1461267_16	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_17	phrog_3099	90.2	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1461267_17	1235797.C816_04186	230.0	0	N/A	N/A
structural_annotation	UHGV-1461267_17	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_18	phrog_3266	48.6	0.00000000000011	tail completion	connector
eggNOG-mapper	UHGV-1461267_18	1232443.BAIA02000078_gene24	172.0	0	N/A	N/A
structural_annotation	UHGV-1461267_18	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_19	phrog_556	72.2	6.2e-21	minor head protein	head and packaging
UniRef90	UHGV-1461267_19	UniRef90_UPI00195E1497	208.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1461267_19	1226322.HMPREF1545_00054	168.0	0	Minor capsid protein	N/A
Pfam	UHGV-1461267_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1461267_19	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_20	phrog_3366	100.0	2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1461267_20	1226322.HMPREF1545_00053	170.0	0	N/A	N/A
structural_annotation	UHGV-1461267_20	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_21	phrog_541	101.5	4.9e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-1461267_21	642492.Clole_0822	63.5	0.0000000000627	N/A	N/A
PHROG	UHGV-1461267_22	phrog_10	164.3	0	major head protein	head and packaging
UniRef90	UHGV-1461267_22	UniRef90_A0A2U1BEF2	518.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1461267_22	1226322.HMPREF1545_00050	486.0	0	Phage capsid family	N/A
Pfam	UHGV-1461267_22	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1461267_22	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1461267_22	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1461267_22	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_23	phrog_2303	49.2	0.000000000000073	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1461267_23	1226322.HMPREF1545_00049	164.0	0	N/A	N/A
structural_annotation	UHGV-1461267_24	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_25	phrog_581	279.5	0	minor head protein	head and packaging
UniRef90	UHGV-1461267_25	UniRef90_A0A1C5N7V1	431.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1461267_25	1226322.HMPREF1545_00046	358.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1461267_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1461267_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1461267_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_26	phrog_8680	221.4	0	N/A	unknown function
UniRef90	UHGV-1461267_26	UniRef90_UPI00189ACAD3	249.0	0	N/A	N/A
eggNOG-mapper	UHGV-1461267_26	411470.RUMGNA_02208	231.0	0	N/A	N/A
Pfam	UHGV-1461267_26	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1461267_26	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1461267_28	phrog_533	359.0	0	portal protein	head and packaging
UniRef90	UHGV-1461267_28	UniRef90_UPI0006C81717	701.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1461267_28	1226322.HMPREF1545_00044	610.0	0	N/A	N/A
Pfam	UHGV-1461267_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1461267_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1461267_29	K06909	378.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1461267_29	phrog_3717	161.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1461267_29	UniRef90_A0A2U1BEH4	722.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1461267_29	1123511.KB905868_gene187	464.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1461267_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1461267_29	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1461267_29	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1461267_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1461267_29	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1461267_31	K07319	113.9	1.5e-33	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1461267_31	phrog_498	258.3	0	DNA methyltransferase	other
UniRef90	UHGV-1461267_31	UniRef90_A0A810Q3Z7	437.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-1461267_31	742823.HMPREF9465_00225	278.0	0	PFAM DNA methylase N-4 N-6	N/A
PADLOC	UHGV-1461267_31	MTase_II_00015	130.0	0	Type II methyltransferase	RM
Pfam	UHGV-1461267_31	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1461267_31	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1461267_31	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1461267_32	K03497	56.6	6e-16	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1461267_32	phrog_498	166.8	0	DNA methyltransferase	other
UniRef90	UHGV-1461267_32	UniRef90_A0A810PZK9	317.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1461267_32	1423758.BN55_01455	174.0	0	DNA methylase	N/A
PADLOC	UHGV-1461267_32	MTase_II_00015	121.6	9.4e-36	Type II methyltransferase	RM
Pfam	UHGV-1461267_32	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1461267_32	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1461267_32	PF02195,MF_02015,TIGR00180,COG5119	N/A	N/A	N/A	N/A
KOfam	UHGV-1461267_33	K01520	75.8	6.4e-22	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1461267_33	phrog_135	59.3	7.5e-17	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1461267_33	UniRef90_UPI000529B3F8	64.7	0.00000000000425	deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial	N/A
eggNOG-mapper	UHGV-1461267_33	231434.JQJH01000001_gene1793	69.7	0.0000000000000381	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1461267_33	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1461267_33	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A