UHGV-1463448 (vOTU-073403)

Viral Genome: UHGV-1463448

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1463448
vOTU ID	vOTU-073403
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0242865
Associated BioSample	SAMN06111960
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.77 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9821
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.99
Jumbo phage	No

Genome content
Genome length (bp)	35,632
GC content	42.25%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	98%
Average CDS length (bps)	773.20
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1463448_2	PF12728,TIGR01764	N/A	N/A	N/A	N/A
KOfam	UHGV-1463448_4	K19232	132.1	3.9e-39	btaE; hyaluronate-binding autotransporter adhesin	N/A
UniRef90	UHGV-1463448_4	UniRef90_C4FP75	263.0	0	Hep/Hag repeat protein	N/A
eggNOG-mapper	UHGV-1463448_4	546273.VEIDISOL_00699	263.0	0	Hep Hag repeat protein	N/A
Pfam	UHGV-1463448_4	PF05662	N/A	N/A	Coiled stalk of trimeric autotransporter adhesin	YadA_stalk
Pfam	UHGV-1463448_4	PF03895	N/A	N/A	YadA-like membrane anchor domain	YadA_anchor
COG	UHGV-1463448_4	COG5295	N/A	N/A	Autotransporter adhesin	N/A
structural_annotation	UHGV-1463448_4	PF03895,NF040984,COG5295	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_6	phrog_674	59.5	3.9e-17	N/A	unknown function
UniRef90	UHGV-1463448_6	UniRef90_UPI000E71DE97	226.0	0	N/A	N/A
Pfam	UHGV-1463448_6	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1463448_6	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_7	phrog_2324	177.4	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463448_7	UniRef90_UPI001402D75D	213.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1463448_7	1209989.TepiRe1_1126	152.0	4.48416e-44	ERF superfamily	N/A
Pfam	UHGV-1463448_7	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1463448_7	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_8	phrog_72	54.7	7.6e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1463448_8	445972.ANACOL_01825	94.4	6.7e-22	N/A	N/A
PHROG	UHGV-1463448_10	phrog_186	83.2	4.1e-24	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463448_10	UniRef90_UPI0003FCA6D4	88.6	2.87e-17	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1463448_10	1111479.AXAR01000022_gene1058	78.2	0.0000000000000475	Replication initiation and membrane attachment	N/A
Pfam	UHGV-1463448_10	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
COG	UHGV-1463448_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1463448_10	PF04492,MF_01911,NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_11	phrog_9804	67.4	2e-19	N/A	unknown function
structural_annotation	UHGV-1463448_11	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1463448_14	K01520	118.3	7.1e-35	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1463448_14	phrog_135	125.7	2.5e-37	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463448_14	UniRef90_S4U059	178.0	0	dUTP diphosphatase-like protein	N/A
eggNOG-mapper	UHGV-1463448_14	246194.CHY_0300	154.0	0	dUTP diphosphatase	N/A
Pfam	UHGV-1463448_14	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1463448_14	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1463448_14	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1463448_14	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_15	phrog_6721	230.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1463448_15	1410661.JNKW01000001_gene838	218.0	0	N/A	N/A
structural_annotation	UHGV-1463448_15	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-1463448_16	K22300	44.9	0.0000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1463448_16	phrog_1689	66.0	8e-19	nucleotide kinase	other
UniRef90	UHGV-1463448_16	UniRef90_UPI000995A85F	63.2	0.000000000729	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1463448_16	655812.HMPREF0061_0798	58.9	0.0000000196	Helix-turn-helix	N/A
Pfam	UHGV-1463448_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1463448_16	PF11753	N/A	N/A	N/A	DUF3310
COG	UHGV-1463448_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1463448_19	phrog_599	49.4	0.000000000000095	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-1463448_19	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1463448_19	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-1463448_19	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
KOfam	UHGV-1463448_20	K03111	142.2	5.09933e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1463448_20	phrog_44	121.0	9.2e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463448_20	UniRef90_A0A239Z9X8	190.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1463448_20	879309.HMPREF9199_0149	181.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1463448_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1463448_20	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1463448_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1463448_20	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1463448_20	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1463448_21	K01160	50.1	0.000000000000066	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1463448_21	phrog_140	107.5	1.1e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463448_21	UniRef90_A0A1C6K6Q7	106.0	7.85e-27	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1463448_21	1211814.CAPG01000074_gene3465	94.4	6.15e-23	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1463448_21	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1463448_21	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1463448_21	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_22	phrog_36	60.2	4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1463448_22	UniRef90_A0A6N2ZMD2	69.7	0.00000000000197	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-1463448_22	706434.HMPREF9429_00383	67.4	0.00000000000257	N/A	N/A
structural_annotation	UHGV-1463448_22	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_24	phrog_4102	66.9	3.7e-19	terminase small subunit	head and packaging
KOfam	UHGV-1463448_25	K06909	100.8	1.6e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1463448_25	phrog_2	161.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1463448_25	UniRef90_UPI001D00EC11	552.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1463448_25	1401067.HMPREF0872_06820	834.0	0	Terminase-like family	N/A
Pfam	UHGV-1463448_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1463448_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1463448_25	PF03237,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_27	phrog_332	469.8	0	head-tail adaptor	connector
UniRef90	UHGV-1463448_27	UniRef90_A0A239Z979	609.0	0	Bacteriophage head to tail connecting protein	N/A
eggNOG-mapper	UHGV-1463448_27	1401067.HMPREF0872_06810	967.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1463448_27	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1463448_27	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_28	phrog_528	78.8	3e-23	N/A	unknown function
UniRef90	UHGV-1463448_28	UniRef90_A0A8E8TUT9	59.3	0.00000000502	Endopeptidase	N/A
eggNOG-mapper	UHGV-1463448_28	1401067.HMPREF0872_06805	182.0	0	N/A	N/A
PHROG	UHGV-1463448_29	phrog_458	118.2	8.6e-35	protease	other
UniRef90	UHGV-1463448_29	UniRef90_UPI0019E883D9	84.3	1.63e-16	peptidase	N/A
eggNOG-mapper	UHGV-1463448_29	1401067.HMPREF0872_06800	274.0	0	N/A	N/A
PHROG	UHGV-1463448_30	phrog_212	181.8	0	major head protein	head and packaging
UniRef90	UHGV-1463448_30	UniRef90_A0A0B2JTD7	395.0	0	N/A	N/A
eggNOG-mapper	UHGV-1463448_30	1401067.HMPREF0872_06795	630.0	0	N/A	N/A
Pfam	UHGV-1463448_30	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1463448_30	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463448_31	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_33	phrog_394	166.4	0	tail protein	tail
eggNOG-mapper	UHGV-1463448_33	1401067.HMPREF0872_06780	342.0	0	N/A	N/A
structural_annotation	UHGV-1463448_33	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_34	phrog_376	609.3	0	tail protein	tail
eggNOG-mapper	UHGV-1463448_34	1401067.HMPREF0872_06775	1219.0	0	N/A	N/A
structural_annotation	UHGV-1463448_34	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_35	phrog_308	88.5	7.9e-26	internal virion protein	head and packaging
structural_annotation	UHGV-1463448_35	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_36	phrog_418	52.0	0.000000000000011	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1463448_36	1401067.HMPREF0872_06765	254.0	0	N/A	N/A
structural_annotation	UHGV-1463448_36	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
KOfam	UHGV-1463448_37	K21471	63.0	1.6e-18	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-1463448_37	UniRef90_A0A096AJQ8	1214.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1463448_37	1401067.HMPREF0872_06760	1214.0	0	N/A	N/A
Pfam	UHGV-1463448_37	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-1463448_37	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_38	phrog_9880	308.7	0	N/A	unknown function
UniRef90	UHGV-1463448_38	UniRef90_A0A239Z8B8	1817.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1463448_38	699218.HMPREF0889_0277	485.0	0	N/A	N/A
Pfam	UHGV-1463448_38	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-1463448_38	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-1463448_39	1401067.HMPREF0872_07835	167.0	3.50325e-43	N/A	N/A
structural_annotation	UHGV-1463448_39	PF03906,NF012201,COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_43	phrog_27828	146.4	6.02558e-44	N/A	unknown function
UniRef90	UHGV-1463448_43	UniRef90_F5KZP5	118.0	8.61e-32	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1463448_43	546273.VEIDISOL_00738	130.0	1.62e-37	N/A	N/A
KOfam	UHGV-1463448_44	K07273	121.5	8.9e-36	acm; lysozyme	N/A
PHROG	UHGV-1463448_44	phrog_291	95.7	6e-28	endolysin	lysis
UniRef90	UHGV-1463448_44	UniRef90_UPI001D073E26	317.0	0	glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1463448_44	1163671.JAGI01000003_gene463	71.6	0.00000000000424	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1463448_44	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1463448_44	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1463448_44	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1463448_45	phrog_18860	73.7	1.8e-21	N/A	unknown function