UHGV-1464332 (vOTU-158224)

Viral Genome: UHGV-1464332

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1464332
vOTU ID	vOTU-158224
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0231614
Associated BioSample	SAMEA2467053
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.82 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9779
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.98
Jumbo phage	No

Genome content
Genome length (bp)	33,637
GC content	47.21%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	92%
Average CDS length (bps)	514.65
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1464332_1	568816.Acin_1822	76.3	0.0000000000000031	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1464332_1	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-1464332_2	phrog_24267	74.8	1.6e-21	N/A	unknown function
UniRef90	UHGV-1464332_2	UniRef90_G4Q8U0	102.0	4.14e-23	Side tail fiber protein from lambdoid prophage Rac	N/A
eggNOG-mapper	UHGV-1464332_2	568816.Acin_1822	89.4	7.74e-18	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1464332_2	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-1464332_4	phrog_5717	74.0	1.6e-21	tail protein	tail
UniRef90	UHGV-1464332_4	UniRef90_UPI0008EFFA34	157.0	6.53986e-42	phage tail protein	N/A
eggNOG-mapper	UHGV-1464332_4	568816.Acin_1301	154.0	4.19002e-41	tail collar domain protein	N/A
COG	UHGV-1464332_4	COG4675	N/A	N/A	Phage tail collar domain	N/A
eggNOG-mapper	UHGV-1464332_5	1150626.PHAMO_80093	90.5	5.55e-16	extracellular polysaccharide biosynthetic process	N/A
COG	UHGV-1464332_5	COG3206	N/A	N/A	Exopolysaccharide export protein/domain GumC/Wzc1	N/A
PHROG	UHGV-1464332_6	phrog_5417	86.0	3.8e-25	N/A	unknown function
UniRef90	UHGV-1464332_6	UniRef90_H8FY63	155.0	0	Putative BcepGomrgp18	N/A
eggNOG-mapper	UHGV-1464332_6	1589747.A0A0B5A4F6_9CAUD	60.1	0.00000000243	N/A	N/A
structural_annotation	UHGV-1464332_6	PF12571	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464332_7	1232428.CAVO010000067_gene421	913.0	0	cellulase activity	N/A
COG	UHGV-1464332_7	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1464332_7	PF18001,PF01828,PF16389,MF_01905,NF010681,COG3401,COG3506	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464332_8	1485543.JMME01000020_gene785	147.0	4.21791e-43	N/A	N/A
structural_annotation	UHGV-1464332_8	PF20387	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464332_9	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_11	phrog_1328	142.2	1.19951e-42	major head protein	head and packaging
UniRef90	UHGV-1464332_11	UniRef90_UPI000413677B	728.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464332_11	1232428.CAVO010000067_gene423	728.0	0	N/A	N/A
Pfam	UHGV-1464332_11	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1464332_11	PF17236,MF_04133,NF033394,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464332_12	1232428.CAVO010000067_gene424	309.0	0	N/A	N/A
PHROG	UHGV-1464332_14	phrog_1216	284.3	0	portal protein	head and packaging
UniRef90	UHGV-1464332_14	UniRef90_A0A0U1L376	477.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1464332_14	1232428.CAVO010000067_gene425	1115.0	0	Membrane	N/A
COG	UHGV-1464332_14	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1464332_14	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1464332_15	K06909	44.6	0.0000000000015	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1464332_15	phrog_2	75.8	8e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1464332_15	UniRef90_A0A6M3IX88	145.0	3.22e-34	Putative terminase	N/A
eggNOG-mapper	UHGV-1464332_15	1232428.CAVO010000067_gene427	887.0	0	DNA packaging	N/A
COG	UHGV-1464332_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1464332_15	PF03354,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_16	phrog_309	188.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-1464332_16	UniRef90_A0A2S0M9J8	283.0	0	Transposase	N/A
eggNOG-mapper	UHGV-1464332_16	1007096.BAGW01000022_gene2658	173.0	0	transposase activity	N/A
COG	UHGV-1464332_16	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1464332_16	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_17	phrog_1233	64.2	2.4e-18	N/A	unknown function
UniRef90	UHGV-1464332_17	UniRef90_UPI000C850486	71.6	0.0000000000000471	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1464332_17	1540257.JQMW01000009_gene3748	73.9	0.00000000000000103	N/A	N/A
structural_annotation	UHGV-1464332_17	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_20	phrog_13890	51.4	0.000000000000015	N/A	unknown function
UniRef90	UHGV-1464332_20	UniRef90_G9XHF4	52.4	0.000000105	Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein	N/A
structural_annotation	UHGV-1464332_20	PF10723,NF010256,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_21	phrog_374	50.1	1.9e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464332_21	UniRef90_UPI001D007043	461.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1464332_21	748727.CLJU_c22370	91.3	1.15e-19	N/A	N/A
structural_annotation	UHGV-1464332_23	PF20075,TIGR02612	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464332_26	401526.TcarDRAFT_1279	85.5	5.45e-19	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1464332_26	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
Pfam	UHGV-1464332_28	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
PHROG	UHGV-1464332_29	phrog_3878	48.2	0.0000000000002	N/A	unknown function
PHROG	UHGV-1464332_31	phrog_872	88.7	6.9e-26	N/A	unknown function
UniRef90	UHGV-1464332_31	UniRef90_UPI00147548DC	290.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464332_31	203119.Cthe_2457	103.0	7.19e-27	N/A	N/A
Pfam	UHGV-1464332_31	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1464332_31	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1464332_31	PF11195,PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_33	phrog_11227	147.3	2.8026e-44	protease	other
UniRef90	UHGV-1464332_33	UniRef90_A0A8J6Z9T4	92.8	2.04e-21	Membrane protease subunit	N/A
eggNOG-mapper	UHGV-1464332_33	1273103.NM10_02347	189.0	0	N/A	N/A
PHROG	UHGV-1464332_35	phrog_918	123.0	7.8e-37	N/A	unknown function
UniRef90	UHGV-1464332_35	UniRef90_UPI001D017B4D	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464332_35	298338.Q5ULN6_9CAUD	115.0	1.78e-32	N/A	N/A
Pfam	UHGV-1464332_35	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1464332_35	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_41	phrog_11947	43.2	0.0000000000064	N/A	unknown function
KOfam	UHGV-1464332_47	K01160	44.5	0.0000000000042	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1464332_47	phrog_140	50.7	0.000000000000032	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464332_47	UniRef90_A0A2S0M9F1	238.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1464332_47	1273103.NM10_01114	153.0	1.4013e-45	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1464332_47	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1464332_47	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_49	phrog_37395	45.2	0.0000000000018	N/A	unknown function
PHROG	UHGV-1464332_51	phrog_236	97.6	2.4e-28	nucleotide kinase	other
UniRef90	UHGV-1464332_51	UniRef90_UPI000DA60B0D	94.0	2.27e-23	N/A	N/A
eggNOG-mapper	UHGV-1464332_51	447909.A6M9A0_9VIRU	80.5	5.37e-19	N/A	N/A
Pfam	UHGV-1464332_51	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-1464332_53	phrog_4074	71.1	1.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1464332_53	1232428.CAVO010000003_gene1016	95.5	4.31e-24	N/A	N/A
structural_annotation	UHGV-1464332_53	TIGR04550	N/A	N/A	N/A	N/A
KOfam	UHGV-1464332_54	K01520	126.7	2.1e-37	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1464332_54	phrog_135	131.7	4.2e-39	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464332_54	UniRef90_A0A2S0MAB6	220.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1464332_54	706434.HMPREF9429_00398	166.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1464332_54	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1464332_54	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1464332_54	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1464332_54	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-1464332_56	K03111	117.5	1.9e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1464332_56	phrog_44	107.0	2.1e-31	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464332_56	UniRef90_A0A355U095	126.0	3.6e-35	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1464332_56	706434.HMPREF9429_00712	108.0	9.37e-29	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1464332_56	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1464332_56	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1464332_56	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1464332_56	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1464332_56	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1464332_57	K02315	117.8	1.2e-34	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1464332_57	phrog_50	133.0	2.4e-39	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464332_57	UniRef90_U7UMV8	316.0	0	IstB-like ATP-binding protein	N/A
eggNOG-mapper	UHGV-1464332_57	1111454.HMPREF1250_0279	316.0	0	DNA replication protein	N/A
Pfam	UHGV-1464332_57	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-1464332_57	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1464332_57	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_58	phrog_15768	98.8	5.9e-29	N/A	unknown function
UniRef90	UHGV-1464332_58	UniRef90_A0A848EU91	128.0	2.11e-32	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1464332_58	1392502.JNIO01000005_gene1182	109.0	4.52e-25	Replication initiator protein A domain protein	N/A
Pfam	UHGV-1464332_58	PF06970	N/A	N/A	Replication initiator protein A (RepA) N-terminus	RepA_N
structural_annotation	UHGV-1464332_58	PF06970,TIGR01714,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-1464332_59	phrog_72	54.2	0.0000000000000019	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464332_59	UniRef90_R5BGH3	124.0	1.97e-32	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1464332_59	1399942.U3PCT8_9CAUD	99.0	1.72e-23	N/A	N/A
PHROG	UHGV-1464332_60	phrog_7838	96.7	2.7e-28	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464332_60	UniRef90_UPI001D07B780	168.0	0	RAD52 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1464332_60	1485543.JMME01000021_gene803	117.0	2.15e-30	N/A	N/A