UHGV-1464986 (vOTU-095108)

Viral Genome: UHGV-1464986

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1464986
vOTU ID	vOTU-095108
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0148720
Associated BioSample	SAMEA2738125
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.93 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9832
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.97
Jumbo phage	No

Genome content
Genome length (bp)	20,324
GC content	39.89%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	25
CDS density	93%
Average CDS length (bps)	759.36
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.93)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1464986_1	UniRef90_UPI001ABAF262	187.0	0	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1464986_1	PF13443,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_3	phrog_20440	178.1	0	N/A	unknown function
UniRef90	UHGV-1464986_3	UniRef90_F5VXX3	143.0	6.72623e-43	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1464986_3	997830.HMPREF1124_0568	146.0	7.00649e-45	N/A	N/A
PHROG	UHGV-1464986_4	phrog_1309	277.6	0	endolysin	lysis
UniRef90	UHGV-1464986_4	UniRef90_A0A1F0KA16	494.0	0	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-1464986_4	1316408.HSISM1_1251	456.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1464986_4	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1464986_4	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-1464986_4	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1464986_4	PF08460,PF05382,TIGR02219,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_5	phrog_608	118.3	3.7e-35	holin	lysis
UniRef90	UHGV-1464986_5	UniRef90_T0TXN2	194.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-1464986_5	1321372.AQQB01000060_gene79	113.0	4.36e-31	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1464986_5	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1464986_5	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1464986_6	phrog_199	49.2	0.000000000000061	holin	lysis
UniRef90	UHGV-1464986_6	UniRef90_A0A7X2X3Q0	278.0	0	Holin	N/A
eggNOG-mapper	UHGV-1464986_6	1051631.F8HGP0_9CAUD	190.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1464986_6	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1464986_6	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1464986_6	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_7	phrog_1554	209.0	0	N/A	unknown function
UniRef90	UHGV-1464986_7	UniRef90_A0A4V0EM35	358.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464986_7	1005705.HMPREF9967_1055	174.0	0	N/A	N/A
structural_annotation	UHGV-1464986_7	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_9	phrog_2189	473.8	0	tail protein	tail
UniRef90	UHGV-1464986_9	UniRef90_A0A6A8V6U1	1515.0	0	CBM-cenC domain-containing protein	N/A
eggNOG-mapper	UHGV-1464986_9	1005705.HMPREF9967_1053	906.0	0	domain protein	N/A
Pfam	UHGV-1464986_9	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
NCBIFam	UHGV-1464986_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1464986_9	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464986_9	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_10	phrog_33	43.2	0.0000000000092	distal tail protein Dit	tail
UniRef90	UHGV-1464986_10	UniRef90_UPI001CC00BD7	385.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1464986_10	1316408.HSISM1_1245	469.0	0	N/A	N/A
structural_annotation	UHGV-1464986_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1464986_11	K10421	54.8	8.6e-16	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1464986_11	phrog_5755	406.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1464986_11	UniRef90_A0A1F0KCN3	1316.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1464986_11	1316408.HSISM1_1244	1174.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-1464986_11	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1464986_11	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1464986_11	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1464986_11	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_12	phrog_709	134.7	3.60001e-40	N/A	unknown function
UniRef90	UHGV-1464986_12	UniRef90_A0A0E4CSV4	165.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1464986_12	1316408.HSISM1_1243	237.0	0	N/A	N/A
structural_annotation	UHGV-1464986_12	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_13	phrog_88	152.7	1.4013e-45	major tail protein	tail
UniRef90	UHGV-1464986_13	UniRef90_T0U4F0	378.0	0	Phage major tail protein	N/A
eggNOG-mapper	UHGV-1464986_13	1316408.HSISM1_1242	378.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1464986_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1464986_13	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_14	phrog_78	41.2	0.000000000033	tail terminator	connector
UniRef90	UHGV-1464986_14	UniRef90_T0U477	203.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1464986_14	1316408.HSISM1_1241	203.0	0	N/A	N/A
structural_annotation	UHGV-1464986_14	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_15	phrog_5	46.4	0.0000000000011	tail completion or Neck1 protein	connector
UniRef90	UHGV-1464986_15	UniRef90_A0A414CIF4	159.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1464986_15	1316408.HSISM1_1058	169.0	0	N/A	N/A
Pfam	UHGV-1464986_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1464986_15	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_16	phrog_1951	120.1	7.5e-36	head-tail adaptor	connector
UniRef90	UHGV-1464986_16	UniRef90_A0A414CIH3	202.0	0	Phage head closure protein	N/A
eggNOG-mapper	UHGV-1464986_16	1316408.HSISM1_1057	202.0	0	Phage head-tail joining protein	N/A
NCBIFam	UHGV-1464986_16	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1464986_16	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1464986_16	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_17	phrog_2550	128.4	1.3e-38	N/A	unknown function
UniRef90	UHGV-1464986_17	UniRef90_T0U4H0	171.0	0	Orf46	N/A
eggNOG-mapper	UHGV-1464986_17	644007.C5J965_9CAUD	158.0	0	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-1464986_17	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_18	phrog_3673	61.3	1.4e-17	Arc-like repressor	transcription regulation
UniRef90	UHGV-1464986_18	UniRef90_A0A4D6A7J7	78.6	5.68e-17	Transcriptional terminator	N/A
PHROG	UHGV-1464986_19	phrog_10	193.3	0	major head protein	head and packaging
UniRef90	UHGV-1464986_19	UniRef90_A0A4D6B1V9	638.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1464986_19	1316408.HSISM1_1054	647.0	0	capsid protein	N/A
Pfam	UHGV-1464986_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1464986_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1464986_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1464986_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1464986_20	K06904	129.3	4.1e-38	N/A	N/A
PHROG	UHGV-1464986_20	phrog_80	158.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1464986_20	UniRef90_A0A414CJ71	373.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1464986_20	1316408.HSISM1_1053	374.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1464986_20	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1464986_20	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1464986_20	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1464986_20	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_21	phrog_12	188.0	0	portal protein	head and packaging
UniRef90	UHGV-1464986_21	UniRef90_A0A4D6B580	787.0	0	Portal (Connector) protein	N/A
eggNOG-mapper	UHGV-1464986_21	1316408.HSISM1_1052	790.0	0	Phage portal protein	N/A
Pfam	UHGV-1464986_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1464986_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1464986_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1464986_21	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_22	phrog_9	340.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1464986_22	UniRef90_A0A7G1JM49	1145.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1464986_22	1316408.HSISM1_1051	1166.0	0	Terminase	N/A
Pfam	UHGV-1464986_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1464986_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1464986_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1464986_22	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_23	phrog_361	154.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-1464986_23	UniRef90_A0A414CIM9	232.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1464986_23	1005705.HMPREF9967_1038	240.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1464986_23	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1464986_23	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1464986_23	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1464986_24	phrog_119	68.8	8.3e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464986_24	UniRef90_W1US92	218.0	0	Prophage LambdaBa02, HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-1464986_24	888049.HMPREF8578_0692	193.0	0	endonuclease activity	N/A
COG	UHGV-1464986_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A