UHGV-1465282 (vOTU-123147)

Viral Genome: UHGV-1465282

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1465282
vOTU ID	vOTU-123147
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0236432
Associated BioSample	SAMN02334036
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.7 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.98
Jumbo phage	No

Genome content
Genome length (bp)	34,601
GC content	55.26%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	91%
Average CDS length (bps)	683.22
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.7)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1465282_2	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_3	phrog_10091	103.9	1.3e-30	holin	lysis
UniRef90	UHGV-1465282_3	UniRef90_D7GNX3	132.0	1.81e-38	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1465282_3	97139.C824_05950	119.0	2.04e-34	Bacteriophage holin	N/A
Pfam	UHGV-1465282_3	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1465282_3	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1465282_3	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465282_3	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_4	phrog_918	99.3	1.8e-29	N/A	unknown function
UniRef90	UHGV-1465282_4	UniRef90_UPI00156D5D02	135.0	7.68e-40	N/A	N/A
eggNOG-mapper	UHGV-1465282_4	411902.CLOBOL_05677	128.0	9.57e-38	N/A	N/A
Pfam	UHGV-1465282_4	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1465282_4	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_5	phrog_937	55.3	0.0000000000000014	hemolysin	other
eggNOG-mapper	UHGV-1465282_5	1297617.JPJD01000099_gene2176	51.6	0.00000035	N/A	N/A
KOfam	UHGV-1465282_6	K08640	96.6	4.2e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1465282_6	phrog_894	61.7	1.2e-17	endolysin	lysis
UniRef90	UHGV-1465282_6	UniRef90_R5EEQ7	305.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-1465282_6	931626.Awo_c26840	111.0	5.07e-28	Peptidase M15	N/A
Pfam	UHGV-1465282_6	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1465282_6	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1465282_6	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465282_6	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
Pfam	UHGV-1465282_10	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1465282_10	PF14686,TIGR03000,COG2512	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1465282_11	931626.Awo_c30920	55.5	0.0000018	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-1465282_12	phrog_156	125.4	1.7e-37	portal protein	head and packaging
eggNOG-mapper	UHGV-1465282_12	693746.OBV_01670	497.0	0	N/A	N/A
structural_annotation	UHGV-1465282_12	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_14	phrog_422	118.9	3.7e-35	major head protein	head and packaging
UniRef90	UHGV-1465282_14	UniRef90_A0A2V2DLC4	199.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1465282_14	693746.OBV_01700	153.0	1.68e-40	N/A	N/A
Pfam	UHGV-1465282_14	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-1465282_14	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1465282_16	K06909	144.3	1.10002e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1465282_16	phrog_979	147.0	2.8026e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1465282_16	UniRef90_A0A6A8VHX7	493.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1465282_16	693746.OBV_01690	480.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1465282_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1465282_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1465282_16	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_18	phrog_15863	47.6	3.5e-19	N/A	unknown function
UniRef90	UHGV-1465282_18	UniRef90_UPI00068FC51E	367.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-1465282_18	1519439.JPJG01000053_gene1369	367.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-1465282_18	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-1465282_18	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
eggNOG-mapper	UHGV-1465282_19	1410650.JHWL01000003_gene2814	73.2	0.00000000131	N/A	N/A
eggNOG-mapper	UHGV-1465282_21	693746.OBV_01730	73.6	0.00000000000000984	N/A	N/A
structural_annotation	UHGV-1465282_21	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-1465282_22	UniRef90_A0A4D7ASB8	320.0	0	N/A	N/A
eggNOG-mapper	UHGV-1465282_22	693746.OBV_01680	334.0	0	N/A	N/A
structural_annotation	UHGV-1465282_22	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
UniRef90	UHGV-1465282_23	UniRef90_UPI001C01A488	151.0	3.22299e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1465282_23	561177.ANHYDRO_01396	76.3	0.00000000000000128	Endodeoxyribonuclease RusA	N/A
COG	UHGV-1465282_23	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1465282_23	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465282_25	PF10013,NF001638,COG4338	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_27	phrog_924	55.2	4.9e-16	N/A	unknown function
UniRef90	UHGV-1465282_27	UniRef90_A0A417H740	137.0	1.25e-38	N/A	N/A
eggNOG-mapper	UHGV-1465282_27	1316932.MHH_c17560	55.5	0.000000183	N/A	N/A
Pfam	UHGV-1465282_27	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1465282_29	phrog_3136	133.1	1e-39	N/A	unknown function
UniRef90	UHGV-1465282_29	UniRef90_A0A3D0HBD2	132.0	4.6e-36	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1465282_29	747.DR93_155	56.6	0.0000000379	ASCH	N/A
COG	UHGV-1465282_29	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1465282_29	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-1465282_30	K19779	40.5	0.000000000035	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-1465282_30	phrog_599	42.3	0.000000000015	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-1465282_30	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1465282_30	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1465282_30	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_32	phrog_4433	83.8	5e-28	N/A	unknown function
eggNOG-mapper	UHGV-1465282_32	445970.ALIPUT_01221	102.0	2.47e-22	DNA-templated transcription, initiation	N/A
COG	UHGV-1465282_32	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
KOfam	UHGV-1465282_33	K00390	85.9	3.5e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1465282_33	phrog_424	122.6	1.7e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1465282_33	UniRef90_A0A1Y4LU27	385.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-1465282_33	1408437.JNJN01000032_gene2312	380.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1465282_33	BrxP_00001	62.2	6.2e-19	BrxP	BREX
Pfam	UHGV-1465282_33	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1465282_33	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1465282_33	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1465282_34	K02315	129.7	3e-38	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1465282_34	phrog_50	120.8	1.3e-35	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465282_34	UniRef90_A0A4Z0Y679	226.0	0	DNA replication protein DnaC	N/A
eggNOG-mapper	UHGV-1465282_34	445972.ANACOL_01829	205.0	0	N/A	N/A
Pfam	UHGV-1465282_34	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1465282_34	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1465282_34	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_35	phrog_16304	60.2	1.9e-17	N/A	unknown function
UniRef90	UHGV-1465282_35	UniRef90_A0A3D3Y5P0	89.4	4.24e-18	N/A	N/A
eggNOG-mapper	UHGV-1465282_35	1410650.JHWL01000003_gene2848	66.2	0.000000000208	N/A	N/A
Pfam	UHGV-1465282_35	PF19808	N/A	N/A	N/A	DUF6291
KOfam	UHGV-1465282_36	K07451	44.8	0.0000000000022	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1465282_36	phrog_119	59.6	5.4e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465282_36	UniRef90_G5SMF8	105.0	7.09e-26	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-1465282_36	762968.HMPREF9441_00533	105.0	1.19e-26	HNH endonuclease	N/A
Pfam	UHGV-1465282_36	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-1465282_36	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1465282_36	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1465282_36	PF19808,TIGR02646	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_37	phrog_4973	67.0	2.7e-19	N/A	unknown function
UniRef90	UHGV-1465282_37	UniRef90_A0A3D3Y0P8	97.8	2.93e-25	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1465282_37	1072685.IX83_07155	53.1	0.0000000158	Helix-turn-helix domain	N/A
Pfam	UHGV-1465282_37	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1465282_37	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-1465282_38	K01160	44.5	0.0000000000042	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1465282_38	phrog_4632	59.5	3.7e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465282_38	UniRef90_A0A7X8IB41	150.0	8.40779e-45	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1465282_38	556263.FSEG_00477	60.1	0.000000000715	N/A	N/A
structural_annotation	UHGV-1465282_38	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1465282_39	K03111	111.4	1.4e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1465282_39	phrog_44	123.2	2.1e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465282_39	UniRef90_A0A3D2HZK1	131.0	6.72e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1465282_39	1378168.N510_01674	122.0	3.89e-33	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1465282_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1465282_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1465282_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1465282_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1465282_39	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1465282_40	UniRef90_UPI001D05CADB	114.0	1.18e-30	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1465282_40	445972.ANACOL_01826	84.3	6.97e-20	HNH nucleases	N/A
Pfam	UHGV-1465282_40	PF13391	N/A	N/A	HNH endonuclease	HNH_2
PHROG	UHGV-1465282_41	phrog_72	48.8	0.000000000000044	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465282_41	UniRef90_A0A2Z4Q9W9	151.0	2.00386e-43	NinB	N/A
eggNOG-mapper	UHGV-1465282_41	445972.ANACOL_01825	154.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1465282_41	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_42	phrog_14970	185.2	0	N/A	unknown function
UniRef90	UHGV-1465282_42	UniRef90_UPI00164BFA28	170.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1465282_42	411470.RUMGNA_02193	143.0	6.70998e-41	double-strand break repair protein	N/A
Pfam	UHGV-1465282_42	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1465282_42	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1465282_42	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1465282_46	phrog_1029	160.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1465282_46	552398.HMPREF0866_01625	134.0	7.5e-36	N/A	N/A
structural_annotation	UHGV-1465282_46	PF10065,COG5532	N/A	N/A	N/A	N/A