UHGV-1465623 (vOTU-153649)

Viral Genome: UHGV-1465623

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1465623
vOTU ID	vOTU-153649
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-4345334
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.58 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9785
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.63
Jumbo phage	No

Genome content
Genome length (bp)	17,901
GC content	45.94%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	27
CDS density	92%
Average CDS length (bps)	607.67
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1465623_1	phrog_19280	44.9	0.0000000000009	N/A	unknown function
UniRef90	UHGV-1465623_1	UniRef90_A0A412AXT4	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-1465623_1	428125.CLOLEP_02045	195.0	0	N/A	N/A
Pfam	UHGV-1465623_1	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-1465623_2	phrog_1067	403.7	0	minor head protein	head and packaging
UniRef90	UHGV-1465623_2	UniRef90_A0A1C6H6B4	985.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1465623_2	1123263.AUKY01000068_gene489	432.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1465623_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1465623_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1465623_2	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1465623_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_3	phrog_33	82.2	1e-23	distal tail protein Dit	tail
UniRef90	UHGV-1465623_3	UniRef90_A0A1C6H6D2	484.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1465623_3	1160721.RBI_I01575	160.0	0	Phage tail protein	N/A
COG	UHGV-1465623_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1465623_3	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_4	phrog_23464	252.7	0	N/A	unknown function
UniRef90	UHGV-1465623_4	UniRef90_A0A1C6H5M9	545.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1465623_4	926561.KB900622_gene636	248.0	0	phage tail tape measure protein	N/A
COG	UHGV-1465623_4	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1465623_4	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_5	phrog_3033	49.4	0.000000000000069	N/A	unknown function
eggNOG-mapper	UHGV-1465623_5	1280671.AUJH01000012_gene3142	52.4	0.0000000175	N/A	N/A
PHROG	UHGV-1465623_6	phrog_709	119.9	1.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-1465623_6	411471.SUBVAR_05858	139.0	6.67999e-41	N/A	N/A
structural_annotation	UHGV-1465623_6	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_7	phrog_88	171.7	0	major tail protein	tail
UniRef90	UHGV-1465623_7	UniRef90_A0A1C6H6F0	360.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1465623_7	1226322.HMPREF1545_00121	190.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1465623_7	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1465623_7	PF06488,TIGR01603,COG3157	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_8	phrog_78	46.4	0.00000000000074	tail terminator	connector
UniRef90	UHGV-1465623_8	UniRef90_U2SBX3	132.0	4.11e-38	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1465623_8	411471.SUBVAR_05856	146.0	2.24208e-44	N/A	N/A
structural_annotation	UHGV-1465623_8	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_9	phrog_5	59.3	1.1e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-1465623_9	UniRef90_UPI000C7BEE97	163.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1465623_9	411471.SUBVAR_05855	145.0	2.12997e-43	N/A	N/A
Pfam	UHGV-1465623_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1465623_9	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_10	phrog_1951	93.9	1.1e-27	head-tail adaptor	connector
UniRef90	UHGV-1465623_10	UniRef90_A0A2V2GSS5	128.0	2.17e-36	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1465623_10	411471.SUBVAR_05854	85.1	2.75e-20	N/A	N/A
structural_annotation	UHGV-1465623_10	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_11	phrog_2550	89.8	1.4e-26	N/A	unknown function
UniRef90	UHGV-1465623_11	UniRef90_R5V091	74.3	0.00000000000000191	Phage related protein	N/A
eggNOG-mapper	UHGV-1465623_11	1226322.HMPREF1545_00117	123.0	1.09e-35	N/A	N/A
structural_annotation	UHGV-1465623_11	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_12	phrog_10	210.3	0	major head protein	head and packaging
UniRef90	UHGV-1465623_12	UniRef90_A0A1C6H720	925.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-1465623_12	1226322.HMPREF1545_00116	665.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1465623_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1465623_12	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1465623_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1465623_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1465623_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1465623_13	K06904	147.8	9.94922e-44	N/A	N/A
PHROG	UHGV-1465623_13	phrog_80	171.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1465623_13	UniRef90_A0A1C6H687	401.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1465623_13	1226322.HMPREF1545_00115	251.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1465623_13	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1465623_13	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1465623_13	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1465623_13	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_14	phrog_12	176.3	0	portal protein	head and packaging
UniRef90	UHGV-1465623_14	UniRef90_A0A1C6H763	809.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1465623_14	1226322.HMPREF1545_00114	561.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1465623_14	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1465623_14	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1465623_14	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1465623_14	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_15	phrog_9	298.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1465623_15	UniRef90_A0A0D8IV16	1090.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1465623_15	1226322.HMPREF1545_00113	895.0	0	Phage Terminase	N/A
Pfam	UHGV-1465623_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1465623_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1465623_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1465623_15	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_16	phrog_361	70.4	2.8e-20	terminase small subunit	head and packaging
UniRef90	UHGV-1465623_16	UniRef90_A0A1C6H6I9	241.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1465623_16	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1465623_16	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1465623_16	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465623_20	PF09274,NF041284,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1465623_21	phrog_36	81.5	1.3e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1465623_21	UniRef90_A0A4Z0XVP8	147.0	6.2638e-43	RNA polymerase sigma factor SigO	N/A
eggNOG-mapper	UHGV-1465623_21	1408303.JNJJ01000084_gene2550	92.4	4.76e-22	N/A	N/A
Pfam	UHGV-1465623_21	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1465623_21	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1465623_21	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A