UHGV-1466964 (vOTU-155226)

Viral Genome: UHGV-1466964

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1466964
vOTU ID	vOTU-155226
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0174757
Associated BioSample	SAMN06112070
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.23 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.23
Jumbo phage	No

Genome content
Genome length (bp)	23,878
GC content	51.90%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	91%
Average CDS length (bps)	531.29
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.23)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1466964_1	693746.OBV_18160	92.4	8.95e-23	N/A	N/A
PHROG	UHGV-1466964_2	phrog_706	106.0	3.4e-31	N/A	unknown function
UniRef90	UHGV-1466964_2	UniRef90_UPI000682A80B	209.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1466964_2	693746.OBV_18170	219.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1466964_2	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1466964_2	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_3	phrog_1535	104.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1466964_3	UniRef90_A0A810PX76	248.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1466964_3	693746.OBV_18190	233.0	0	domain protein	N/A
COG	UHGV-1466964_3	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1466964_3	PF16789,TIGR02473,COG2882	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_4	phrog_1194	58.1	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1466964_4	1232443.BAIA02000078_gene17	62.8	0.0000000000608	N/A	N/A
structural_annotation	UHGV-1466964_4	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_5	phrog_6616	64.4	8.8e-19	tail protein	tail
eggNOG-mapper	UHGV-1466964_5	1235797.C816_04180	106.0	5.59e-25	N/A	N/A
structural_annotation	UHGV-1466964_5	PF16466,TIGR01603,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1466964_6	1235797.C816_04179	94.7	2.39e-18	Chaperone of endosialidase	N/A
structural_annotation	UHGV-1466964_6	NF041249,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_9	phrog_38044	60.6	4.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1466964_9	59241.E7DNB8_BPDP1	62.4	0.000000101	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1466964_10	PF14686,PF21253,NF040788,COG2512	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1466964_13	1151292.QEW_0668	58.9	0.00000119	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1466964_13	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1466964_13	PF10651,TIGR04339	N/A	N/A	N/A	N/A
KOfam	UHGV-1466964_15	K08640	99.9	4.4e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1466964_15	phrog_894	58.9	8.3e-17	endolysin	lysis
UniRef90	UHGV-1466964_15	UniRef90_R5EEQ7	200.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-1466964_15	931626.Awo_c26840	128.0	1.35e-34	Peptidase M15	N/A
Pfam	UHGV-1466964_15	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1466964_15	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1466964_15	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1466964_15	PF05951,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_16	phrog_4105	102.2	3e-30	N/A	unknown function
UniRef90	UHGV-1466964_16	UniRef90_A0A8D9UHA9	130.0	2.79e-37	Holin protein	N/A
eggNOG-mapper	UHGV-1466964_16	742733.HMPREF9469_05011	140.0	4.18988e-42	N/A	N/A
PHROG	UHGV-1466964_17	phrog_10091	101.4	6.8e-30	holin	lysis
UniRef90	UHGV-1466964_17	UniRef90_D7GNX3	131.0	2.57e-38	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1466964_17	97139.C824_05950	117.0	1.18e-33	Bacteriophage holin	N/A
Pfam	UHGV-1466964_17	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1466964_17	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1466964_17	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1466964_17	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1466964_18	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1466964_22	K06400	374.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1466964_22	phrog_95	368.2	0	integrase	integration and excision
UniRef90	UHGV-1466964_22	UniRef90_UPI00164E9A6A	505.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1466964_22	718252.FP2_29980	349.0	0	N/A	N/A
Pfam	UHGV-1466964_22	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1466964_22	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1466964_22	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1466964_22	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1466964_22	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1466964_23	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_26	phrog_8	47.5	0.00000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-1466964_26	UniRef90_A0A1C6GB05	65.9	0.0000000000277	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-1466964_26	1297617.JPJD01000059_gene2644	63.5	0.0000000000465	addiction module antidote protein HigA	N/A
Pfam	UHGV-1466964_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1466964_26	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1466964_26	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1466964_28	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_33	phrog_434	304.8	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1466964_33	UniRef90_UPI001D078B74	281.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-1466964_33	1121344.JHZO01000003_gene985	276.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1466964_33	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1466964_33	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1466964_33	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1466964_33	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_34	phrog_3377	194.2	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1466964_34	397290.C810_01484	168.0	0	N/A	N/A
KOfam	UHGV-1466964_35	K07455	173.7	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1466964_35	phrog_148	176.2	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1466964_35	UniRef90_UPI0018C50A8E	328.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1466964_35	40521.Q9T172_BPA18	217.0	0	DNA metabolic process	N/A
Pfam	UHGV-1466964_35	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1466964_35	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
structural_annotation	UHGV-1466964_35	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1466964_36	K03111	136.1	3.9e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1466964_36	phrog_44	142.6	2.29953e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1466964_36	UniRef90_UPI001C118A83	160.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1466964_36	1226322.HMPREF1545_04080	150.0	1.54143e-44	Single-strand binding protein family	N/A
Pfam	UHGV-1466964_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1466964_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1466964_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1466964_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1466964_36	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1466964_37	K01160	57.6	3.7e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1466964_37	phrog_140	127.9	5.7e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1466964_37	UniRef90_A0A7G9WF80	130.0	1.99e-36	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1466964_37	1123263.AUKY01000072_gene2102	123.0	3.02e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1466964_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1466964_37	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1466964_37	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_38	phrog_4973	66.9	2.7e-19	N/A	unknown function
UniRef90	UHGV-1466964_38	UniRef90_A0A3D3Y0P8	97.8	2.93e-25	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1466964_38	1072685.IX83_07155	53.1	0.0000000158	Helix-turn-helix domain	N/A
Pfam	UHGV-1466964_38	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1466964_38	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_39	phrog_16304	65.5	7.4e-19	N/A	unknown function
UniRef90	UHGV-1466964_39	UniRef90_UPI001959E913	120.0	3.69e-30	N/A	N/A
eggNOG-mapper	UHGV-1466964_39	1121344.JHZO01000003_gene982	93.2	2.57e-20	N/A	N/A
Pfam	UHGV-1466964_39	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1466964_39	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1466964_40	phrog_9804	151.2	5.60519e-45	N/A	unknown function
UniRef90	UHGV-1466964_40	UniRef90_A0A3D1LDS2	174.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1466964_40	1121344.JHZO01000003_gene981	162.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1466964_40	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1466964_40	PF11417	N/A	N/A	N/A	N/A