UHGV-1469075 (vOTU-097015)

Viral Genome: UHGV-1469075

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1469075
vOTU ID	vOTU-097015
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0215834
Associated BioSample	SAMEA1906524
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.57 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.98
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.89
Jumbo phage	No

Genome content
Genome length (bp)	30,811
GC content	39.73%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	42
CDS density	92%
Average CDS length (bps)	678.07
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1469075_1	UniRef90_A0A374N9Y2	206.0	0	N/A	N/A
structural_annotation	UHGV-1469075_1	PF10651,PF08931,TIGR02268	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_2	phrog_1067	98.4	1.5e-29	minor head protein	head and packaging
UniRef90	UHGV-1469075_2	UniRef90_A0A1G5CPD2	149.0	2.03e-37	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-1469075_2	1462527.CCDM010000003_gene3730	59.3	0.00000144	gp58-like protein	N/A
Pfam	UHGV-1469075_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1469075_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1469075_2	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1469075_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_3	phrog_33	83.1	5.5e-24	distal tail protein Dit	tail
UniRef90	UHGV-1469075_3	UniRef90_A0A1G5CPA2	131.0	1.31e-33	Phage-related protein	N/A
eggNOG-mapper	UHGV-1469075_3	1160721.RBI_I01575	93.2	6.79e-20	Phage tail protein	N/A
COG	UHGV-1469075_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1469075_3	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1469075_4	K20283	50.3	0.0000000000000012	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-1469075_4	phrog_5218	283.6	0	N/A	unknown function
UniRef90	UHGV-1469075_4	UniRef90_A0A412ULX0	1890.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1469075_4	588581.Cpap_1264	212.0	0	Tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1469075_4	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1469075_4	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1469075_4	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1469075_5	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_6	phrog_88	75.3	8.5e-22	major tail protein	tail
UniRef90	UHGV-1469075_6	UniRef90_A0A1G5CNS8	150.0	1.84971e-42	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1469075_6	1321782.HMPREF1986_01362	65.1	0.000000000263	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1469075_6	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1469075_6	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1469075_7	UniRef90_UPI000E5564A4	273.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1469075_7	1235792.C808_00089	50.8	0.00000434	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1469075_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1469075_7	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1469075_8	272623.L59277	51.6	0.0000006	N/A	N/A
structural_annotation	UHGV-1469075_8	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_9	phrog_19734	68.9	6.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-1469075_9	86416.Clopa_0343	59.7	0.000000000649	N/A	N/A
structural_annotation	UHGV-1469075_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_10	phrog_749	55.6	8.3e-16	N/A	unknown function
UniRef90	UHGV-1469075_10	UniRef90_A0A1G5CMX8	105.0	1.23e-27	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1469075_10	1211817.CCAT010000053_gene2133	58.9	0.000000000584	N/A	N/A
PHROG	UHGV-1469075_11	phrog_10	127.1	1.6e-37	major head protein	head and packaging
UniRef90	UHGV-1469075_11	UniRef90_A0A412ULW9	732.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1469075_11	1211817.CCAT010000053_gene2132	326.0	0	Phage capsid family	N/A
Pfam	UHGV-1469075_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1469075_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1469075_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1469075_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1469075_12	K01358	137.8	9.99995e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1469075_12	phrog_94	205.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1469075_12	UniRef90_A0A412ULU1	468.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1469075_12	86416.Clopa_0340	180.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1469075_12	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1469075_12	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1469075_12	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_13	phrog_12	96.4	2.3e-28	portal protein	head and packaging
UniRef90	UHGV-1469075_13	UniRef90_A0A412ULV9	751.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1469075_13	1415774.U728_1254	261.0	0	Phage portal protein	N/A
Pfam	UHGV-1469075_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1469075_13	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1469075_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1469075_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_14	phrog_9	287.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1469075_14	UniRef90_A0A412UM03	1045.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1469075_14	86416.Clopa_0337	613.0	0	Phage Terminase	N/A
Pfam	UHGV-1469075_14	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1469075_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1469075_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1469075_14	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_15	phrog_5110	83.0	2.3e-24	terminase small subunit	head and packaging
UniRef90	UHGV-1469075_15	UniRef90_A0A1M5U1D5	113.0	1.2e-30	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-1469075_15	1211817.CCAT010000053_gene2128	100.0	3.14e-26	N/A	N/A
Pfam	UHGV-1469075_15	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1469075_15	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_16	phrog_119	66.4	4.2e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1469075_16	UniRef90_A0A412ULY9	216.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1469075_16	1158607.UAU_01026	99.8	8.3e-26	HNH endonuclease	N/A
Pfam	UHGV-1469075_16	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1469075_16	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-1469075_17	394503.Ccel_3053	56.2	0.0000000329	N/A	N/A
structural_annotation	UHGV-1469075_17	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_18	phrog_3584	150.0	1.54143e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1469075_18	1235800.C819_00515	72.0	0.00000000000374	N/A	N/A
structural_annotation	UHGV-1469075_18	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_21	phrog_8684	94.2	7.9e-28	N/A	unknown function
UniRef90	UHGV-1469075_21	UniRef90_A0A374DV44	176.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1469075_21	563031.HMPREF0666_01127	82.0	2.52e-18	YopX protein	N/A
Pfam	UHGV-1469075_21	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1469075_21	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1469075_21	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_22	phrog_2118	118.2	7.1e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1469075_22	UniRef90_A0A374DVG7	250.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1469075_22	610130.Closa_0730	151.0	1.4013e-45	HNH endonuclease	N/A
Pfam	UHGV-1469075_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1469075_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1469075_22	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_24	phrog_824	144.5	3.09687e-43	N/A	unknown function
UniRef90	UHGV-1469075_24	UniRef90_A0A3D3D6C6	247.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1469075_24	397288.C806_00096	156.0	0	VRR_NUC	N/A
Pfam	UHGV-1469075_24	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1469075_24	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-1469075_25	K03427	162.2	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1469075_25	phrog_6380	367.9	0	DNA methyltransferase	other
UniRef90	UHGV-1469075_25	UniRef90_UPI001B3C6DA9	672.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1469075_25	1444306.JFZC01000034_gene2643	322.0	0	type I restriction-modification system	N/A
PADLOC	UHGV-1469075_25	MTase_I_00010	101.6	8.5e-30	Type I methyltransferase	RM
Pfam	UHGV-1469075_25	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1469075_25	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1469075_25	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-1469075_26	K03497	157.3	0	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1469075_26	phrog_6218	245.3	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1469075_26	UniRef90_UPI000E47CAB6	801.0	0	ParB/RepB/Spo0J family partition protein	N/A
eggNOG-mapper	UHGV-1469075_26	445972.ANACOL_00162	239.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1469075_26	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-1469075_26	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-1469075_26	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-1469075_26	PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1469075_30	COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_31	phrog_6058	42.4	0.0000000000074	N/A	unknown function
structural_annotation	UHGV-1469075_31	NF033787	N/A	N/A	N/A	N/A
UniRef90	UHGV-1469075_32	UniRef90_UPI0015F48AC0	153.0	0	Lar family restriction alleviation protein	N/A
Pfam	UHGV-1469075_32	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1469075_32	PF14354,TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1469075_33	UniRef90_UPI000E4DC4DA	138.0	5.44e-39	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1469075_33	PF15597	N/A	N/A	N/A	N/A
KOfam	UHGV-1469075_34	K00390	87.9	1.1e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1469075_34	phrog_424	118.9	4.1e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1469075_34	UniRef90_UPI001C034617	590.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1469075_34	1408437.JNJN01000032_gene2312	334.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1469075_34	BrxP_00001	72.3	3.8e-21	BrxP	BREX
Pfam	UHGV-1469075_34	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1469075_34	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1469075_34	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_36	phrog_585	115.0	4.7e-34	N/A	unknown function
UniRef90	UHGV-1469075_36	UniRef90_UPI00051C896C	143.0	1.32997e-41	N/A	N/A
eggNOG-mapper	UHGV-1469075_36	1033744.CAEL01000029_gene1306	128.0	4.7e-36	N/A	N/A
Pfam	UHGV-1469075_36	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-1469075_36	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
UniRef90	UHGV-1469075_38	UniRef90_UPI001897B0FF	70.9	0.0000000000000091	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1469075_38	1121289.JHVL01000079_gene1187	59.7	0.0000000000377	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1469075_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1469075_38	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1469075_39	K22300	47.7	0.00000000000032	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1469075_39	phrog_8	41.1	0.000000000036	transcriptional regulator	transcription regulation
UniRef90	UHGV-1469075_39	UniRef90_UPI0015F3DE1D	107.0	1.07e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1469075_39	272562.CA_C1559	67.4	0.00000000000249	sequence-specific DNA binding	N/A
Pfam	UHGV-1469075_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1469075_39	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1469075_39	PF05339,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1469075_40	phrog_1914	142.2	3.09967e-42	N/A	unknown function
UniRef90	UHGV-1469075_40	UniRef90_UPI000E543E50	350.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1469075_40	1160721.RBI_I01604	167.0	0	N/A	N/A
Pfam	UHGV-1469075_40	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1469075_40	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1469075_40	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-1469075_41	UniRef90_UPI000E52DA24	736.0	0	zinc ribbon domain-containing protein	N/A
Pfam	UHGV-1469075_41	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
structural_annotation	UHGV-1469075_41	PF18933,PF02883,MF_02248,NF008627,COG5435,COG2847	N/A	N/A	N/A	N/A
KOfam	UHGV-1469075_42	K14059	91.3	1.6e-26	int; integrase	N/A
PHROG	UHGV-1469075_42	phrog_1	114.3	1.5e-33	integrase	integration and excision
UniRef90	UHGV-1469075_42	UniRef90_A0A1G5CL52	795.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-1469075_42	693746.OBV_41260	182.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1469075_42	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1469075_42	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1469075_42	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A