UHGV-1470006 (vOTU-080996)

Viral Genome: UHGV-1470006

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1470006
vOTU ID	vOTU-080996
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0266958
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.03 (High-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9755
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.73
Jumbo phage	No

Genome content
Genome length (bp)	39,691
GC content	54.03%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	62
CDS density	89%
Average CDS length (bps)	566.90
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1470006_1	1408437.JNJN01000043_gene801	111.0	1.06e-27	N/A	N/A
eggNOG-mapper	UHGV-1470006_2	1408437.JNJN01000043_gene802	103.0	6.57e-27	N/A	N/A
PHROG	UHGV-1470006_3	phrog_16490	102.0	1.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-1470006_3	1408437.JNJN01000043_gene803	155.0	1.30321e-43	N/A	N/A
PHROG	UHGV-1470006_6	phrog_34651	42.7	0.0000000000082	N/A	unknown function
PHROG	UHGV-1470006_8	phrog_15303	84.0	1.3e-24	N/A	unknown function
PHROG	UHGV-1470006_9	phrog_1863	77.3	1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1470006_9	718252.FP2_04900	154.0	0	N/A	N/A
KOfam	UHGV-1470006_10	K07273	173.7	0	acm; lysozyme	N/A
PHROG	UHGV-1470006_10	phrog_291	138.5	5.90003e-41	endolysin	lysis
UniRef90	UHGV-1470006_10	UniRef90_UPI001D0EE7D8	313.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1470006_10	748224.HMPREF9436_00154	291.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1470006_10	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1470006_10	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1470006_10	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_13	phrog_1067	194.2	0	minor head protein	head and packaging
UniRef90	UHGV-1470006_13	UniRef90_A0A2A7AM44	698.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_13	1123263.AUKY01000068_gene489	191.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1470006_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1470006_13	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1470006_13	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1470006_13	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_14	phrog_33	91.0	2.2e-26	distal tail protein Dit	tail
UniRef90	UHGV-1470006_14	UniRef90_A0A173Z1X4	145.0	2.46e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-1470006_14	439292.Bsel_2995	98.2	4.6e-22	tail component	N/A
COG	UHGV-1470006_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1470006_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_15	phrog_9959	84.6	6.5e-25	tail length tape measure protein	tail
UniRef90	UHGV-1470006_15	UniRef90_A0A2A7B6K1	1536.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_15	596328.HMPREF0578_1241	155.0	5.91e-36	phage tail tape measure protein	N/A
Pfam	UHGV-1470006_15	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1470006_15	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1470006_15	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1470006_15	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_18	phrog_88	101.7	7.2e-30	major tail protein	tail
UniRef90	UHGV-1470006_18	UniRef90_UPI0018771F27	132.0	4.11e-35	phage tail protein	N/A
eggNOG-mapper	UHGV-1470006_18	349161.Dred_2600	69.3	0.0000000000179	N/A	N/A
NCBIFam	UHGV-1470006_18	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1470006_18	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1470006_19	UniRef90_A0A1C6FG30	135.0	3.2e-37	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1470006_19	1235798.C817_04589	113.0	1.78e-29	N/A	N/A
structural_annotation	UHGV-1470006_19	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1470006_20	999413.HMPREF1094_02005	75.9	1.93e-16	N/A	N/A
structural_annotation	UHGV-1470006_20	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_21	phrog_19734	87.2	1.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1470006_21	349161.Dred_2602	74.3	0.00000000000000228	N/A	N/A
structural_annotation	UHGV-1470006_21	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_22	phrog_749	55.4	9e-16	N/A	unknown function
UniRef90	UHGV-1470006_22	UniRef90_UPI0016630012	65.1	0.0000000000184	phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1470006_22	349161.Dred_2603	90.1	4.49e-22	N/A	N/A
PHROG	UHGV-1470006_23	phrog_10	137.9	3.09995e-41	major head protein	head and packaging
UniRef90	UHGV-1470006_23	UniRef90_A0A2A7B712	934.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1470006_23	1235792.C808_00086	461.0	0	Phage capsid family	N/A
Pfam	UHGV-1470006_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1470006_23	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1470006_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1470006_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1470006_23	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1470006_24	K01358	90.1	3.5e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1470006_24	phrog_94	141.1	1.19993e-41	head maturation protease	head and packaging
UniRef90	UHGV-1470006_24	UniRef90_UPI001C10F40E	173.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1470006_24	1232452.BAIB02000007_gene1626	145.0	2.28e-40	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1470006_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1470006_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1470006_24	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_25	phrog_12	117.4	9.5e-35	portal protein	head and packaging
UniRef90	UHGV-1470006_25	UniRef90_A0A2A7B6S8	810.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1470006_25	349161.Dred_2606	271.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1470006_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1470006_25	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1470006_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1470006_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_26	phrog_9	241.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1470006_26	UniRef90_A0A2A7ALT4	1063.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1470006_26	610130.Closa_0741	625.0	0	Phage Terminase	N/A
Pfam	UHGV-1470006_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1470006_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1470006_26	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_27	phrog_13845	56.9	2.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-1470006_27	508419.F8J158_9CAUD	74.3	0.0000000000000017	N/A	N/A
structural_annotation	UHGV-1470006_27	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_28	phrog_119	62.3	8e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470006_28	UniRef90_A0A2A7B6I3	244.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_28	610130.Closa_0739	114.0	3.32e-31	HNH nucleases	N/A
Pfam	UHGV-1470006_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1470006_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1470006_31	phrog_13999	55.9	5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1470006_31	1391428.V5KT07_9CAUD	59.3	0.0000000000869	N/A	N/A
structural_annotation	UHGV-1470006_32	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-1470006_33	K03497	82.8	6.8e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1470006_33	phrog_4715	118.6	5.9e-35	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470006_33	UniRef90_A0A2A7B6Q0	718.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_33	411471.SUBVAR_05842	179.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1470006_33	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1470006_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1470006_33	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-1470006_34	UniRef90_A0A355JDC2	107.0	7.64e-27	N/A	N/A
KOfam	UHGV-1470006_35	K03496	219.7	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1470006_35	phrog_164	155.1	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470006_35	UniRef90_A0A2A7B6H3	520.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_35	411471.SUBVAR_05839	226.0	0	AAA domain	N/A
Pfam	UHGV-1470006_35	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1470006_35	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1470006_35	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_36	phrog_6969	58.8	8.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1470006_36	1232446.BAIE02000002_gene816	65.5	0.000000000964	N/A	N/A
Pfam	UHGV-1470006_36	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1470006_36	PF04182,MF_01819,TIGR04176,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-1470006_37	K03111	138.1	9.70007e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1470006_37	phrog_44	139.5	2.09999e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470006_37	UniRef90_A0A2A7B6R5	298.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1470006_37	748224.HMPREF9436_00638	206.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1470006_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1470006_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1470006_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1470006_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1470006_37	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_38	phrog_7566	71.5	9e-21	N/A	unknown function
eggNOG-mapper	UHGV-1470006_38	411471.SUBVAR_05830	83.6	7.89e-20	N/A	N/A
PHROG	UHGV-1470006_41	phrog_72	55.6	9.8e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1470006_41	411471.SUBVAR_05829	145.0	1.45006e-41	N/A	N/A
structural_annotation	UHGV-1470006_41	PF05772,NF007281	N/A	N/A	N/A	N/A
COG	UHGV-1470006_42	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1470006_42	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1470006_44	760568.Desku_0919	109.0	6.31e-27	N/A	N/A
structural_annotation	UHGV-1470006_44	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
UniRef90	UHGV-1470006_51	UniRef90_UPI000BEF0F65	91.3	5.24e-23	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1470006_51	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1470006_52	UniRef90_A0A2A7AM72	148.0	3.78351e-44	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_52	1378168.N510_01712	66.2	0.0000000000147	N/A	N/A
structural_annotation	UHGV-1470006_52	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1470006_53	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_56	phrog_888	139.5	2.20004e-41	N/A	unknown function
UniRef90	UHGV-1470006_56	UniRef90_A0A6N7TMA2	318.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_56	1415774.U728_165	87.4	8.36e-18	Short C-terminal domain	N/A
Pfam	UHGV-1470006_56	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-1470006_56	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1470006_56	PF15947,PF14471	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_59	phrog_1373	43.4	0.0000000000028	transcriptional regulator	transcription regulation
UniRef90	UHGV-1470006_59	UniRef90_A0A2A7B6N3	388.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1470006_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1470006_59	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1470006_60	K14059	184.2	0	int; integrase	N/A
PHROG	UHGV-1470006_60	phrog_1	167.1	0	integrase	integration and excision
UniRef90	UHGV-1470006_60	UniRef90_A0A367GI93	216.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1470006_60	1507.HMPREF0262_00307	163.0	4.76441e-44	Phage integrase family	N/A
Pfam	UHGV-1470006_60	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1470006_60	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1470006_60	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1470006_61	phrog_28749	188.4	0	N/A	unknown function
UniRef90	UHGV-1470006_61	UniRef90_UPI001CBF3510	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-1470006_61	411483.FAEPRAA2165_02541	167.0	0	N/A	N/A
Pfam	UHGV-1470006_61	PF19537	N/A	N/A	N/A	DUF6061
structural_annotation	UHGV-1470006_61	PF19537	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1470006_62	411483.FAEPRAA2165_02535	223.0	0	N/A	N/A
COG	UHGV-1470006_62	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A