UHGV-1470314 (vOTU-085171)

Viral Genome: UHGV-1470314

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1470314
vOTU ID	vOTU-085171
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0267257
Associated BioSample	SAMEA3182075
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.98 (High-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.74
Jumbo phage	No

Genome content
Genome length (bp)	39,754
GC content	58.72%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	91%
Average CDS length (bps)	680.49
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1470314_2	phrog_37329	48.1	0.00000000000012	N/A	unknown function
Pfam	UHGV-1470314_2	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-1470314_2	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1470314_2	PF17744,PF16655,MF_01905,NF038116,COG3979,COG2033	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_4	phrog_156	293.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1470314_4	1410650.JHWL01000003_gene2833	536.0	0	N/A	N/A
structural_annotation	UHGV-1470314_4	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_5	phrog_13908	144.7	6.09565e-43	N/A	unknown function
eggNOG-mapper	UHGV-1470314_5	1410650.JHWL01000003_gene2831	104.0	2.53e-23	N/A	N/A
PHROG	UHGV-1470314_6	phrog_1357	215.0	0	major head protein	head and packaging
UniRef90	UHGV-1470314_6	UniRef90_A0A2V2CFL5	397.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1470314_6	1410650.JHWL01000003_gene2830	276.0	0	N/A	N/A
Pfam	UHGV-1470314_6	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1470314_6	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1470314_6	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_8	phrog_12105	121.9	3.5e-36	N/A	unknown function
eggNOG-mapper	UHGV-1470314_8	1226322.HMPREF1545_03850	59.7	0.00000000112	N/A	N/A
UniRef90	UHGV-1470314_9	UniRef90_R5DCX9	189.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1470314_9	1410650.JHWL01000003_gene2815	137.0	6.88e-34	N/A	N/A
PHROG	UHGV-1470314_10	phrog_22978	127.8	4.49817e-43	N/A	unknown function
eggNOG-mapper	UHGV-1470314_10	1408437.JNJN01000039_gene389	484.0	0	heme binding	N/A
Pfam	UHGV-1470314_10	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-1470314_10	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1470314_11	PF18962,NF011773	N/A	N/A	N/A	N/A
KOfam	UHGV-1470314_12	K19721	138.1	1.79997e-41	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1470314_12	phrog_819	123.5	0	tail protein	tail
eggNOG-mapper	UHGV-1470314_12	1519439.JPJG01000060_gene1892	101.0	7.86e-20	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1470314_12	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1470314_12	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1470314_13	phrog_37900	52.9	5.9e-17	N/A	unknown function
UniRef90	UHGV-1470314_13	UniRef90_R5IRZ6	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-1470314_13	1519439.JPJG01000060_gene1894	177.0	0	N/A	N/A
Pfam	UHGV-1470314_13	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1470314_13	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1470314_13	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_14	phrog_937	48.0	0.00000000000019	hemolysin	other
eggNOG-mapper	UHGV-1470314_14	1519439.JPJG01000023_gene533	49.7	0.00000188	N/A	N/A
PHROG	UHGV-1470314_15	phrog_443	56.8	6.8e-16	holin	lysis
UniRef90	UHGV-1470314_15	UniRef90_A0A4R1QPE5	91.7	4.38e-23	Phage r1t holin	N/A
eggNOG-mapper	UHGV-1470314_15	1469948.JPNB01000002_gene3855	91.7	7.34e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1470314_15	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1470314_15	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1470314_16	K01447	95.8	6.2e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1470314_16	phrog_670	122.0	7.1e-36	endolysin	lysis
UniRef90	UHGV-1470314_16	UniRef90_R8W9R7	123.0	3.45e-31	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1470314_16	1203606.HMPREF1526_00589	123.0	5.79e-32	Ami_2	N/A
Pfam	UHGV-1470314_16	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1470314_16	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1470314_16	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1470314_17	1160721.RBI_I00206	52.0	0.0000000396	N/A	N/A
structural_annotation	UHGV-1470314_17	PF10723	N/A	N/A	N/A	N/A
UniRef90	UHGV-1470314_21	UniRef90_A0A8F0WD75	80.1	0.00000000000000105	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1470314_21	1378168.N510_03079	70.9	0.00000000000153	N/A	N/A
KOfam	UHGV-1470314_22	K14059	207.4	0	int; integrase	N/A
PHROG	UHGV-1470314_22	phrog_1	198.4	0	integrase	integration and excision
UniRef90	UHGV-1470314_22	UniRef90_A0A212JT52	254.0	0	Putative Integrase family protein	N/A
eggNOG-mapper	UHGV-1470314_22	1507.HMPREF0262_00307	200.0	0	Phage integrase family	N/A
Pfam	UHGV-1470314_22	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1470314_22	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1470314_22	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1470314_22	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-1470314_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1470314_23	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-1470314_25	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-1470314_25	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
KOfam	UHGV-1470314_27	K22300	56.0	8.9e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1470314_27	phrog_8	49.1	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1470314_27	UniRef90_A0A844DFR0	114.0	3.42e-30	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1470314_27	748224.HMPREF9436_01444	113.0	2.23e-30	N/A	N/A
Pfam	UHGV-1470314_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1470314_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1470314_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1470314_30	PF10548	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_31	phrog_1468	57.3	1.1e-16	transcriptional repressor	transcription regulation
UniRef90	UHGV-1470314_31	UniRef90_A0A1Y3RFS1	58.9	0.000000000604	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-1470314_33	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1470314_34	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1470314_37	K00558	138.3	1.54143e-44	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1470314_37	phrog_363	236.2	0	DNA methyltransferase	other
UniRef90	UHGV-1470314_37	UniRef90_UPI00082E0CBC	359.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1470314_37	742738.HMPREF9460_04053	274.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1470314_37	DruM2_00001	117.0	9.3e-35	DNA cytosine methylase	Druantia
Pfam	UHGV-1470314_37	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1470314_37	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1470314_37	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1470314_37	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1470314_38	K00390	98.2	8.5e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1470314_38	phrog_424	125.7	3.2e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1470314_38	UniRef90_UPI001D087498	410.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1470314_38	1408437.JNJN01000032_gene2312	323.0	0	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-1470314_38	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1470314_38	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1470314_38	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_39	phrog_3136	131.9	1.6e-39	N/A	unknown function
UniRef90	UHGV-1470314_39	UniRef90_A0A3D0HBD2	127.0	7.87e-34	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1470314_39	642492.Clole_1416	56.2	0.0000000812	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1470314_39	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1470314_39	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_40	phrog_38832	63.9	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1470314_40	445972.ANACOL_00165	58.9	0.0000000539	N/A	N/A
PHROG	UHGV-1470314_44	phrog_190	99.8	2.8e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470314_44	UniRef90_UPI0006C2AC63	125.0	9.98e-34	N/A	N/A
eggNOG-mapper	UHGV-1470314_44	693746.OBV_25250	117.0	1.32e-31	N/A	N/A
Pfam	UHGV-1470314_44	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1470314_44	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_46	phrog_374	55.6	0.0000000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1470314_46	1423807.BACO01000037_gene1103	68.6	0.00000000000118	N/A	N/A
PHROG	UHGV-1470314_48	phrog_2245	88.8	5.6e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1470314_48	UniRef90_A0A4U9RLZ8	64.7	0.000000000118	N/A	N/A
eggNOG-mapper	UHGV-1470314_48	706433.HMPREF9430_01279	65.5	0.0000000000122	N/A	N/A
structural_annotation	UHGV-1470314_48	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_49	phrog_9467	177.2	0	N/A	unknown function
UniRef90	UHGV-1470314_49	UniRef90_UPI0015B3EAA7	139.0	1.7e-39	Gp49 family protein	N/A
eggNOG-mapper	UHGV-1470314_49	1519439.JPJG01000060_gene1880	180.0	0	N/A	N/A
Pfam	UHGV-1470314_49	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-1470314_49	APIS043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1470314_49	PF13876	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_50	phrog_3584	111.1	9.3e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1470314_50	537013.CLOSTMETH_02141	71.6	0.0000000000018	N/A	N/A
structural_annotation	UHGV-1470314_50	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-1470314_51	phrog_606	72.8	5.3e-21	terminase small subunit	head and packaging
UniRef90	UHGV-1470314_51	UniRef90_UPI001F487344	127.0	4.84e-35	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1470314_51	397290.C810_05185	127.0	3.99e-35	DNA-packaging protein gp3	N/A
Pfam	UHGV-1470314_51	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1470314_51	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1470314_52	K06909	137.5	1.4e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1470314_52	phrog_979	132.3	7.00005e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1470314_52	UniRef90_A0A810Q5R0	641.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1470314_52	1410650.JHWL01000003_gene2834	637.0	0	N/A	N/A
Pfam	UHGV-1470314_52	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1470314_52	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1470314_52	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A