UHGV-1472099 (vOTU-167045)

Viral Genome: UHGV-1472099

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1472099
vOTU ID	vOTU-167045
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0216029
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.13 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9824
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	46.87
Jumbo phage	No

Genome content
Genome length (bp)	30,845
GC content	32.33%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	37
CDS density	97%
Average CDS length (bps)	805.30
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1472099_2	phrog_2450	60.3	4.1e-17	N/A	unknown function
UniRef90	UHGV-1472099_2	UniRef90_A0A7J4N8E5	94.0	1.06e-21	N/A	N/A
eggNOG-mapper	UHGV-1472099_2	1329516.JPST01000018_gene2637	61.2	0.000000000547	N/A	N/A
PHROG	UHGV-1472099_3	phrog_7858	276.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1472099_3	1123321.KB905822_gene3872	223.0	0	N/A	N/A
AcrCatalog	UHGV-1472099_3	cluster_23659	221.0	0	NA	N/A
structural_annotation	UHGV-1472099_3	PF11039,PF03602,MF_02125,MF_00084,NF007527,TIGR00571,COG3981,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_4	phrog_7405	265.3	0	N/A	unknown function
UniRef90	UHGV-1472099_4	UniRef90_A0A6L3UXN4	258.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1472099_4	1329516.JPST01000018_gene2640	186.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1472099_4	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-1472099_4	PF02195,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_5	phrog_309	100.3	1e-29	terminase small subunit	head and packaging
UniRef90	UHGV-1472099_5	UniRef90_A0A843GSL4	120.0	1.6e-30	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1472099_5	272558.10176158	93.2	2.24e-21	Homeodomain-like domain	N/A
COG	UHGV-1472099_5	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
KOfam	UHGV-1472099_6	K06909	293.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1472099_6	phrog_3717	123.5	2.6e-39	terminase large subunit	head and packaging
UniRef90	UHGV-1472099_6	UniRef90_A0A349YI29	639.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1472099_6	536232.CLM_2529	462.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1472099_6	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1472099_6	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1472099_6	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1472099_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1472099_6	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_7	phrog_64	122.7	2.1e-36	portal protein	head and packaging
UniRef90	UHGV-1472099_7	UniRef90_A0A843GSM3	432.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1472099_7	1121342.AUCO01000012_gene1700	154.0	1.09e-38	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1472099_7	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1472099_7	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_8	phrog_1657	161.8	0	head morphogenesis	head and packaging
UniRef90	UHGV-1472099_8	UniRef90_A0A1G9U003	147.0	1.91e-38	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-1472099_8	1582149.A0A0A8WEF5_9CAUD	137.0	1.99e-34	Phage Mu protein F like protein	N/A
PHROG	UHGV-1472099_9	phrog_4264	45.8	0.00000000000093	N/A	unknown function
PHROG	UHGV-1472099_13	phrog_2303	56.8	4e-16	head scaffolding protein	head and packaging
structural_annotation	UHGV-1472099_13	MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_14	phrog_909	46.3	0.00000000000067	major head protein	head and packaging
eggNOG-mapper	UHGV-1472099_14	1158612.I580_01911	63.9	0.0000000000229	N/A	N/A
structural_annotation	UHGV-1472099_14	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_15	phrog_29	224.9	0	major head protein	head and packaging
UniRef90	UHGV-1472099_15	UniRef90_UPI00082C04A5	346.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1472099_15	1158612.I580_01912	298.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1472099_15	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1472099_15	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_17	phrog_4020	59.5	4.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-1472099_17	748727.CLJU_c31290	57.4	0.00000000098	N/A	N/A
PHROG	UHGV-1472099_18	phrog_8435	62.5	6.2e-18	N/A	unknown function
structural_annotation	UHGV-1472099_18	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472099_19	632292.Calhy_0769	75.9	2.67e-16	Phage virion morphogenesis	N/A
COG	UHGV-1472099_19	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472099_19	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_20	phrog_7585	93.3	2.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1472099_20	445335.CBN_3080	82.0	3.12e-18	N/A	N/A
structural_annotation	UHGV-1472099_20	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_21	phrog_6686	121.9	4.4e-36	tail tube protein	tail
UniRef90	UHGV-1472099_21	UniRef90_A0A1C6KI12	149.0	2.70997e-41	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1472099_21	1304880.JAGB01000002_gene2211	101.0	1.92e-24	N/A	N/A
structural_annotation	UHGV-1472099_21	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_22	phrog_6280	109.8	1.8e-32	N/A	unknown function
UniRef90	UHGV-1472099_22	UniRef90_UPI0011579C94	107.0	1.71e-27	esterase	N/A
eggNOG-mapper	UHGV-1472099_22	445335.CBN_3078	107.0	4.31e-28	N/A	N/A
PHROG	UHGV-1472099_23	phrog_1533	506.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1472099_23	UniRef90_A0A417QH00	405.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1472099_23	1027292.HMPREF9372_1250	405.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1472099_23	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1472099_23	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1472099_23	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1472099_23	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-1472099_24	UniRef90_UPI001CC5BC32	60.1	0.000000252	phage tail protein	N/A
eggNOG-mapper	UHGV-1472099_24	1347392.CCEZ01000045_gene7	57.8	0.000000268	phage tail	N/A
COG	UHGV-1472099_24	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1472099_24	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_25	phrog_5555	143.6	1.3999e-42	tail protein	tail
UniRef90	UHGV-1472099_25	UniRef90_A0A1C6KI10	329.0	0	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-1472099_25	999413.HMPREF1094_00205	174.0	2.10195e-43	N/A	N/A
Pfam	UHGV-1472099_25	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1472099_25	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1472099_25	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_26	phrog_372	240.1	0	tail protein	tail
UniRef90	UHGV-1472099_26	UniRef90_UPI001EE154D9	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-1472099_26	1282664.H354_06726	128.0	3.49e-28	N/A	N/A
Pfam	UHGV-1472099_26	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1472099_26	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
Pfam	UHGV-1472099_27	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1472099_27	PF11314,PF14600,PF02839	N/A	N/A	N/A	N/A
PHROG	UHGV-1472099_28	phrog_937	40.4	0.000000000049	hemolysin	other
eggNOG-mapper	UHGV-1472099_28	478749.BRYFOR_07639	49.3	0.00000388	N/A	N/A
PHROG	UHGV-1472099_29	phrog_443	60.9	3.6e-17	holin	lysis
UniRef90	UHGV-1472099_29	UniRef90_UPI00067E9ED8	88.6	1.05e-21	holin	N/A
eggNOG-mapper	UHGV-1472099_29	411490.ANACAC_00704	87.0	6.1e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1472099_29	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1472099_29	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1472099_30	K07273	154.8	1.4013e-45	acm; lysozyme	N/A
PHROG	UHGV-1472099_30	phrog_291	137.3	1.3e-40	endolysin	lysis
UniRef90	UHGV-1472099_30	UniRef90_A0A8D9UIP9	247.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1472099_30	1120933.ATUY01000002_gene158	174.0	0	lysozyme activity	N/A
Pfam	UHGV-1472099_30	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1472099_30	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1472099_30	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1472099_32	K02316	133.1	2.2e-39	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1472099_32	phrog_47	128.8	4.7e-38	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472099_32	UniRef90_A0A843GN62	350.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-1472099_32	1408823.AXUS01000004_gene138	95.5	6.21e-19	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
Pfam	UHGV-1472099_32	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1472099_32	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-1472099_32	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1472099_32	PF13155,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472099_33	PF08804	N/A	N/A	N/A	N/A
UniRef90	UHGV-1472099_34	UniRef90_A0A7X8WD06	75.1	0.00000000000000499	N/A	N/A
Pfam	UHGV-1472099_34	PF08761	N/A	N/A	dUTPase	dUTPase_2
structural_annotation	UHGV-1472099_35	PF01591,MF_00165,NF005250,COG0125	N/A	N/A	N/A	N/A
KOfam	UHGV-1472099_36	K03465	108.2	8.6e-32	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-1472099_36	phrog_85	60.6	2.7e-17	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472099_36	UniRef90_A0A413BDY8	274.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1472099_36	511680.BUTYVIB_00662	275.0	0	thymidylate synthase (FAD) activity	N/A
Pfam	UHGV-1472099_36	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
COG	UHGV-1472099_36	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-1472099_36	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-1472099_37	K02337	721.6	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-1472099_37	phrog_405	657.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472099_37	UniRef90_A0A843GPT9	1028.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1472099_37	436114.SYO3AOP1_0632	430.0	0	TIGRFAM DNA polymerase III, alpha subunit	N/A
Pfam	UHGV-1472099_37	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-1472099_37	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-1472099_37	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-1472099_37	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
NCBIFam	UHGV-1472099_37	TIGR00594.1	N/A	N/A	DNA polymerase III subunit alpha	N/A
COG	UHGV-1472099_37	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-1472099_37	PF07733,PF02811,PF17657,PF14579,MF_01902,TIGR00594,COG0587	N/A	N/A	N/A	N/A