UHGV-1475794 (vOTU-150339)

Viral Genome: UHGV-1475794

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1475794
vOTU ID	vOTU-150339
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0299083
Associated BioSample	SAMEA3664920
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	78.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.81
Jumbo phage	No

Genome content
Genome length (bp)	46,377
GC content	39.60%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	71
CDS density	85%
Average CDS length (bps)	557.03
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1475794_2	phrog_21718	54.9	0.0000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1475794_2	658655.HMPREF0988_00919	107.0	4.11e-27	N/A	N/A
structural_annotation	UHGV-1475794_2	NF033819	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_4	phrog_16490	182.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1475794_4	397290.C810_01328	182.0	0	N/A	N/A
PHROG	UHGV-1475794_5	phrog_20016	226.2	0	N/A	unknown function
UniRef90	UHGV-1475794_5	UniRef90_A0A285PT46	163.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1475794_5	397290.C810_05214	228.0	0	N/A	N/A
structural_annotation	UHGV-1475794_5	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1475794_6	658655.HMPREF0988_00915	104.0	7.57e-25	N/A	N/A
PHROG	UHGV-1475794_7	phrog_1233	47.8	0.00000000000024	N/A	unknown function
eggNOG-mapper	UHGV-1475794_7	397290.C810_01336	102.0	4.74e-27	N/A	N/A
structural_annotation	UHGV-1475794_10	PF04347	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_11	phrog_6246	58.0	6.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1475794_11	1555202.A0A097EXJ0_9CAUD	53.5	0.0000000557	N/A	N/A
structural_annotation	UHGV-1475794_11	PF04937,NF041175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1475794_14	UniRef90_A0A3R6B3D9	119.0	7.94e-34	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1475794_14	877411.JMMA01000002_gene1483	48.9	0.00000104	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1475794_14	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1475794_14	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1475794_18	UniRef90_A0A8D9UIS5	128.0	1.08e-32	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1475794_18	658655.HMPREF0988_00895	140.0	2.28e-39	N/A	N/A
PHROG	UHGV-1475794_20	phrog_236	99.0	7.9e-29	nucleotide kinase	other
UniRef90	UHGV-1475794_20	UniRef90_A0A8D9PGN7	140.0	1.41994e-41	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-1475794_20	1123263.AUKY01000015_gene1590	85.5	5.23e-21	N/A	N/A
Pfam	UHGV-1475794_20	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1475794_20	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_21	phrog_2685	42.2	0.000000000015	partition protein ATPase	other
Pfam	UHGV-1475794_21	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
KOfam	UHGV-1475794_22	K14060	109.9	2.8e-32	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1475794_22	phrog_125	171.7	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1475794_22	UniRef90_C0CM35	240.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-1475794_22	476272.RUMHYD_01910	240.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1475794_22	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1475794_22	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1475794_22	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_24	phrog_6493	131.6	4.8e-39	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1475794_24	UniRef90_A0A352NL77	127.0	2.84e-32	Replication protein	N/A
eggNOG-mapper	UHGV-1475794_24	1121422.AUMW01000049_gene1257	127.0	1.26e-32	Transcriptional regulator	N/A
COG	UHGV-1475794_24	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-1475794_30	UniRef90_UPI0011072322	75.1	0.00000000000000394	N/A	N/A
eggNOG-mapper	UHGV-1475794_30	411473.RUMCAL_00360	69.7	0.0000000000000743	N/A	N/A
structural_annotation	UHGV-1475794_30	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_31	phrog_38	157.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1475794_31	UniRef90_A0A8D9PG33	774.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1475794_31	1232453.BAIF02000058_gene1623	426.0	0	TIGRFAM Phage	N/A
COG	UHGV-1475794_31	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1475794_31	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_32	phrog_36	57.2	3.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1475794_32	UniRef90_A0A373NRA4	90.5	1.61e-20	N/A	N/A
eggNOG-mapper	UHGV-1475794_32	702437.HMPREF9432_00895	52.0	0.00000209	sigma factor activity	N/A
COG	UHGV-1475794_32	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1475794_32	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_33	phrog_64	169.7	0	portal protein	head and packaging
UniRef90	UHGV-1475794_33	UniRef90_A0A3R6ASF4	743.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1475794_33	1298920.KI911353_gene2663	469.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1475794_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1475794_33	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1475794_34	UniRef90_R6C0B6	119.0	8.97e-31	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1475794_35	phrog_909	79.3	3.5e-23	major head protein	head and packaging
UniRef90	UHGV-1475794_35	UniRef90_R7BGI8	176.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1475794_35	1536772.R70723_06665	55.5	0.000000025	N/A	N/A
PHROG	UHGV-1475794_36	phrog_29	153.2	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-1475794_36	UniRef90_A0A412RQU1	639.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1475794_36	1296659.S5MNB6_9CAUD	169.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1475794_36	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1475794_36	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1475794_37	UniRef90_A0A416G2T8	72.4	0.00000000000000748	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1475794_37	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1475794_38	397290.C810_01402	63.2	0.0000000000282	N/A	N/A
PHROG	UHGV-1475794_39	phrog_4105	90.1	1.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-1475794_39	411459.RUMOBE_00911	161.0	0	N/A	N/A
PHROG	UHGV-1475794_40	phrog_18218	128.1	2.8e-38	N/A	unknown function
UniRef90	UHGV-1475794_40	UniRef90_A0A8D9PGR5	152.0	1.4013e-45	Holin	N/A
eggNOG-mapper	UHGV-1475794_40	411902.CLOBOL_03424	77.8	3.31e-17	N/A	N/A
structural_annotation	UHGV-1475794_40	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1475794_41	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1475794_42	UniRef90_UPI001BBD4500	135.0	5.92e-37	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1475794_42	397290.C810_01411	192.0	0	N/A	N/A
structural_annotation	UHGV-1475794_42	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1475794_43	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1475794_44	476272.RUMHYD_01968	180.0	0	N/A	N/A
structural_annotation	UHGV-1475794_44	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_45	phrog_36112	62.4	5.2e-18	N/A	unknown function
UniRef90	UHGV-1475794_45	UniRef90_A0A8D9PG71	133.0	7.49e-37	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1475794_45	1298920.KI911353_gene2651	124.0	4.1e-34	N/A	N/A
structural_annotation	UHGV-1475794_45	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_47	phrog_28918	109.2	2.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-1475794_47	1298920.KI911353_gene2649	223.0	0	tape measure	N/A
COG	UHGV-1475794_47	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1475794_48	phrog_1194	54.1	0.0000000000000023	N/A	unknown function
eggNOG-mapper	UHGV-1475794_48	742733.HMPREF9469_01808	69.7	0.000000000000236	N/A	N/A
Pfam	UHGV-1475794_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1475794_48	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_49	phrog_18190	367.0	0	N/A	unknown function
UniRef90	UHGV-1475794_49	UniRef90_A0A416L7Z5	221.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1475794_49	483218.BACPEC_01143	202.0	0	N/A	N/A
Pfam	UHGV-1475794_49	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1475794_49	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_50	phrog_17196	140.4	1.29998e-41	kinase	other
UniRef90	UHGV-1475794_50	UniRef90_D4L3U0	330.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1475794_50	483218.BACPEC_01141	204.0	0	N/A	N/A
KOfam	UHGV-1475794_51	K03733	56.2	6.5e-16	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-1475794_51	phrog_1	58.2	1.6e-16	integrase	integration and excision
UniRef90	UHGV-1475794_51	UniRef90_E4LCC7	93.6	6.01e-21	Phage integrase SAM-like domain protein	N/A
eggNOG-mapper	UHGV-1475794_51	2113.MCFN_00790	103.0	1.75e-24	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1475794_51	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
COG	UHGV-1475794_51	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
KOfam	UHGV-1475794_52	K01446	87.1	1.8e-25	PGRP; peptidoglycan recognition protein	N/A
PHROG	UHGV-1475794_52	phrog_1493	168.3	0	endolysin	lysis
UniRef90	UHGV-1475794_52	UniRef90_A0A416AFQ9	360.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1475794_52	553973.CLOHYLEM_04450	211.0	0	Ami_2	N/A
Pfam	UHGV-1475794_52	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1475794_52	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1475794_52	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1475794_52	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_53	phrog_26308	98.1	1.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1475794_53	445973.CLOBAR_01976	112.0	8.27e-28	N/A	N/A
structural_annotation	UHGV-1475794_53	PF03843,MF_01959,TIGR00752,COG3065	N/A	N/A	N/A	N/A
KOfam	UHGV-1475794_54	K22300	59.4	7.6e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1475794_54	phrog_8	79.1	6.9e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1475794_54	UniRef90_A0A1Q6KAD1	153.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1475794_54	1235790.C805_00362	99.0	5.93e-25	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1475794_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1475794_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1475794_54	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1475794_55	UniRef90_A0A1Q6KAH5	113.0	1.39e-31	N/A	N/A
eggNOG-mapper	UHGV-1475794_55	1121335.Clst_0370	92.4	3.85e-24	N/A	N/A
structural_annotation	UHGV-1475794_55	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1475794_58	K07741	130.1	3.3e-38	antB; anti-repressor protein	N/A
PHROG	UHGV-1475794_58	phrog_130	243.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1475794_58	UniRef90_A0A356C696	396.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1475794_58	525255.HMPREF0077_0424	261.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1475794_58	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1475794_58	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1475794_58	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1475794_58	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_59	phrog_4433	97.1	1.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-1475794_59	886882.PPSC2_p0048	111.0	4.01e-26	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1475794_59	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1475794_59	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_60	phrog_4292	59.8	2.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-1475794_60	411460.RUMTOR_01375	51.2	0.0000000451	N/A	N/A
KOfam	UHGV-1475794_63	K19171	64.7	9.1e-19	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1475794_63	phrog_77	113.2	1.9e-33	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1475794_63	UniRef90_A0A412RQV0	394.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1475794_63	397290.C810_01461	351.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1475794_63	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1475794_63	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-1475794_64	K07455	176.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1475794_64	phrog_148	169.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1475794_64	UniRef90_A0A1C5WMV6	369.0	0	p33	N/A
eggNOG-mapper	UHGV-1475794_64	431943.CKL_0416	223.0	0	RecT family	N/A
Pfam	UHGV-1475794_64	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1475794_64	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1475794_64	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1475794_64	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_65	phrog_25456	65.6	4.9e-20	N/A	unknown function
PHROG	UHGV-1475794_66	phrog_9822	178.6	0	N/A	unknown function
PHROG	UHGV-1475794_67	phrog_392	58.3	1.7e-16	metal-dependent hydrolase	other
UniRef90	UHGV-1475794_67	UniRef90_R7BIJ8	110.0	6.29e-31	Putative phage-related hydrolase	N/A
eggNOG-mapper	UHGV-1475794_67	1122985.HMPREF1991_02241	83.6	5.89e-19	N/A	N/A
Pfam	UHGV-1475794_67	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-1475794_67	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
PHROG	UHGV-1475794_68	phrog_392	117.9	9.2e-35	metal-dependent hydrolase	other
UniRef90	UHGV-1475794_68	UniRef90_A0A412RQX2	300.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1475794_68	1232453.BAIF02000057_gene1138	121.0	1.58e-32	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
COG	UHGV-1475794_68	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1475794_68	PF02112,MF_00457,NF041851,COG2220	N/A	N/A	N/A	N/A
PHROG	UHGV-1475794_69	phrog_7839	66.8	3e-19	N/A	unknown function
UniRef90	UHGV-1475794_69	UniRef90_A0A413HUB9	90.9	5.09e-21	N/A	N/A
eggNOG-mapper	UHGV-1475794_69	1410650.JHWL01000003_gene2844	72.0	0.00000000000000947	N/A	N/A
PHROG	UHGV-1475794_70	phrog_8684	42.4	0.0000000000069	N/A	unknown function
Pfam	UHGV-1475794_70	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1475794_70	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1475794_71	K03111	66.9	4.5e-19	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1475794_71	phrog_44	60.5	4.4e-17	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1475794_71	UniRef90_D3AFD2	94.4	9.67e-24	Single-stranded DNA-binding protein (Fragment)	N/A
eggNOG-mapper	UHGV-1475794_71	1280696.ATVY01000037_gene1304	107.0	5.65e-29	Single-strand binding protein family	N/A
Pfam	UHGV-1475794_71	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1475794_71	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1475794_71	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1475794_71	PF00436,MF_00984,NF005579,COG2965	N/A	N/A	N/A	N/A