UHGV-1476763 (vOTU-035697)

Viral Genome: UHGV-1476763

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1476763
vOTU ID	vOTU-035697
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0209796
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.9 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.982
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	50.67
Jumbo phage	No

Genome content
Genome length (bp)	29,712
GC content	42.67%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	96%
Average CDS length (bps)	662.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1476763_1	phrog_8124	81.1	2.4e-24	endolysin	lysis
UniRef90	UHGV-1476763_1	UniRef90_A0A7U9RXF5	246.0	0	LYZ2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1476763_1	1235800.C819_03946	245.0	0	Ami_2	N/A
Pfam	UHGV-1476763_1	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-1476763_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-1476763_2	phrog_1129	59.8	3.4e-17	holin	lysis
UniRef90	UHGV-1476763_2	UniRef90_A0A1Y4IR52	135.0	1.26e-39	Holin	N/A
eggNOG-mapper	UHGV-1476763_2	1235798.C817_03464	134.0	5.86001e-40	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1476763_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1476763_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_3	phrog_937	43.9	0.0000000000039	hemolysin	other
UniRef90	UHGV-1476763_3	UniRef90_R5GGW2	93.2	2.47e-22	Phosphoglucosamine mutase	N/A
eggNOG-mapper	UHGV-1476763_3	1298920.KI911353_gene2670	106.0	3.13e-28	N/A	N/A
PHROG	UHGV-1476763_6	phrog_5302	270.2	0	tail protein	tail
eggNOG-mapper	UHGV-1476763_6	1105031.HMPREF1141_1190	284.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1476763_6	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1476763_6	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476763_7	411470.RUMGNA_03237	76.3	7.4e-17	N/A	N/A
structural_annotation	UHGV-1476763_7	PF08948,MF_01537,NF007541,COG3123	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476763_8	1321778.HMPREF1982_03560	84.3	0.0000000000000128	N/A	N/A
COG	UHGV-1476763_8	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-1476763_9	phrog_13289	350.8	0	tail protein	tail
UniRef90	UHGV-1476763_9	UniRef90_R9MV22	547.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-1476763_9	1235798.C817_04594	547.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1476763_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1476763_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1476763_9	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1476763_9	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_10	phrog_33	59.9	6.2e-17	distal tail protein Dit	tail
UniRef90	UHGV-1476763_10	UniRef90_A0A350VIV2	171.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1476763_10	1235798.C817_02569	184.0	0	tail component	N/A
NCBIFam	UHGV-1476763_10	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1476763_10	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1476763_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_11	phrog_13339	336.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1476763_11	UniRef90_W7CZ00	249.0	0	Tail tape measure protein	N/A
eggNOG-mapper	UHGV-1476763_11	469378.Ccur_02660	312.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1476763_11	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1476763_11	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1476763_11	COG1340	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476763_11	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_12	phrog_3033	68.7	6.4e-20	N/A	unknown function
UniRef90	UHGV-1476763_12	UniRef90_A0A2X2UJ60	87.4	9.88e-22	Phage-like protein	N/A
eggNOG-mapper	UHGV-1476763_12	411470.RUMGNA_02317	88.2	8.2e-23	N/A	N/A
PHROG	UHGV-1476763_13	phrog_709	110.9	3.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-1476763_13	1304866.K413DRAFT_1232	164.0	0	N/A	N/A
structural_annotation	UHGV-1476763_13	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_14	phrog_88	172.7	0	major tail protein	tail
UniRef90	UHGV-1476763_14	UniRef90_UPI001921DE03	281.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1476763_14	610130.Closa_0749	265.0	0	phage major tail protein, phi13 family	N/A
Pfam	UHGV-1476763_14	PF06488	N/A	N/A	Phage tail tube protein	L_lac_phage_MSP
NCBIFam	UHGV-1476763_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1476763_14	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_15	phrog_78	68.8	9e-20	tail terminator	connector
eggNOG-mapper	UHGV-1476763_15	1304866.K413DRAFT_1230	148.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-1476763_15	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_16	phrog_5	49.6	0.000000000000094	tail completion or Neck1 protein	connector
UniRef90	UHGV-1476763_16	UniRef90_UPI0006C82A14	150.0	1.4013e-44	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1476763_16	1304866.K413DRAFT_1229	130.0	2.66e-37	N/A	N/A
Pfam	UHGV-1476763_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1476763_16	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_17	phrog_25	65.0	1.1e-18	head closure Hc1	connector
UniRef90	UHGV-1476763_17	UniRef90_UPI0019219E88	190.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1476763_17	1304866.K413DRAFT_1228	171.0	0	head-tail adaptor	N/A
Pfam	UHGV-1476763_17	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1476763_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1476763_17	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1476763_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_18	phrog_40	41.8	0.000000000016	head-tail adaptor Ad1	connector
UniRef90	UHGV-1476763_18	UniRef90_A0A3R6NIS9	140.0	1.29004e-41	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1476763_18	1304866.K413DRAFT_1227	138.0	2.06005e-41	Phage gp6-like head-tail connector protein	N/A
NCBIFam	UHGV-1476763_18	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1476763_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_19	phrog_10	213.0	0	major head protein	head and packaging
UniRef90	UHGV-1476763_19	UniRef90_UPI001898BFD5	580.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1476763_19	397288.C806_00073	484.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1476763_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1476763_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1476763_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1476763_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1476763_20	K06904	95.6	7.6e-28	N/A	N/A
PHROG	UHGV-1476763_20	phrog_80	104.1	2.1e-30	head maturation protease	head and packaging
UniRef90	UHGV-1476763_20	UniRef90_UPI0018985D9B	282.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1476763_20	397288.C806_00074	278.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1476763_20	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1476763_20	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1476763_20	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1476763_20	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_21	phrog_12	209.8	0	portal protein	head and packaging
UniRef90	UHGV-1476763_21	UniRef90_A0A416UC13	687.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1476763_21	397288.C806_00075	419.0	0	Portal protein	N/A
Pfam	UHGV-1476763_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1476763_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1476763_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1476763_21	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_22	phrog_9	266.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1476763_22	UniRef90_A0A0F0CBF9	1008.0	0	Phage terminase	N/A
eggNOG-mapper	UHGV-1476763_22	1304866.K413DRAFT_1222	938.0	0	Terminase	N/A
Pfam	UHGV-1476763_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1476763_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1476763_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1476763_22	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_23	phrog_83	75.0	1.1e-21	terminase small subunit	head and packaging
UniRef90	UHGV-1476763_23	UniRef90_A0A412ZBU7	244.0	0	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-1476763_23	1304866.K413DRAFT_1221	216.0	0	phage terminase small subunit	N/A
Pfam	UHGV-1476763_23	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1476763_23	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1476763_23	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_25	phrog_144	59.4	6e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476763_25	UniRef90_A0A7G9G6Z8	219.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1476763_25	1304866.K413DRAFT_1217	209.0	0	HNH nucleases	N/A
PHROG	UHGV-1476763_26	phrog_36	62.5	8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1476763_26	UniRef90_A0A416MN03	142.0	1.01e-40	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1476763_26	1256908.HMPREF0373_00671	119.0	2.24e-32	N/A	N/A
Pfam	UHGV-1476763_26	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1476763_26	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_27	phrog_6568	67.5	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1476763_27	1203606.HMPREF1526_00241	55.5	0.00000000166	N/A	N/A
UniRef90	UHGV-1476763_28	UniRef90_UPI00164D117E	93.2	3.11e-22	N/A	N/A
structural_annotation	UHGV-1476763_28	PF17400	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_29	phrog_9298	254.1	0	radical SAM domain protein	other
UniRef90	UHGV-1476763_29	UniRef90_A0A3E2VQZ3	536.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-1476763_29	478749.BRYFOR_07592	488.0	0	N/A	N/A
COG	UHGV-1476763_29	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1476763_29	MF_01865,TIGR00089,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_31	phrog_3301	127.9	4.9e-38	pyrophosphatase	other
UniRef90	UHGV-1476763_31	UniRef90_A0A7W3SYW6	131.0	2.86e-36	NTP pyrophosphatase (Non-canonical NTP hydrolase)	N/A
eggNOG-mapper	UHGV-1476763_31	411459.RUMOBE_01042	160.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-1476763_31	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1476763_31	COG1694	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476763_32	1235802.C823_04650	47.4	0.00000262	N/A	N/A
PHROG	UHGV-1476763_34	phrog_2514	121.1	7.5e-36	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476763_34	UniRef90_A0A3R6H2J6	136.0	2.66e-35	N/A	N/A
eggNOG-mapper	UHGV-1476763_34	33035.JPJF01000135_gene5078	169.0	0	Conserved phage C-terminus (Phg_2220_C)	N/A
COG	UHGV-1476763_34	COG1802	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-1476763_34	PF10771,MF_01177,TIGR01610,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-1476763_35	K01160	52.8	0.00000000000001	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1476763_35	phrog_1682	74.4	1.7e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476763_35	UniRef90_A0A417V5H0	137.0	2.77e-39	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1476763_35	1399942.U3PDU0_9CAUD	101.0	7.29e-26	magnesium ion binding	N/A
Pfam	UHGV-1476763_35	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1476763_35	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-1476763_36	UniRef90_A0A417WAJ1	133.0	3.93e-38	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1476763_36	1235800.C819_02254	132.0	1.52e-38	HNH nucleases	N/A
PHROG	UHGV-1476763_37	phrog_1227	246.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476763_37	UniRef90_A0A4P6LTY0	478.0	0	N/A	N/A
eggNOG-mapper	UHGV-1476763_37	33035.JPJF01000071_gene4463	404.0	0	N/A	N/A
Pfam	UHGV-1476763_37	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1476763_37	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1476763_37	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1476763_38	phrog_561	161.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476763_38	UniRef90_A0A6N7W7U3	326.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1476763_38	33035.JPJF01000071_gene4462	335.0	0	N/A	N/A
Pfam	UHGV-1476763_38	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-1476763_38	TIGR01913,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1476763_39	K03546	45.6	0.00000000000026	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1476763_39	phrog_1499	305.2	0	N/A	unknown function
UniRef90	UHGV-1476763_39	UniRef90_A0A4P6LSC6	731.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-1476763_39	742733.HMPREF9469_01850	626.0	0	DNA recombination	N/A
Pfam	UHGV-1476763_39	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1476763_39	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1476763_39	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
Pfam	UHGV-1476763_42	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17