UHGV-1477650 (vOTU-113215)

Viral Genome: UHGV-1477650

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1477650
vOTU ID	vOTU-113215
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0130689
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.09 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.77
Jumbo phage	No

Genome content
Genome length (bp)	18,264
GC content	36.61%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	25
CDS density	90%
Average CDS length (bps)	655.08
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.09)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1477650_2	phrog_2245	80.0	2.8e-23	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1477650_2	UniRef90_A0A1Y4M2Y6	103.0	8.5e-27	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1477650_2	1680.BADO_1259	75.5	1.41e-16	N/A	N/A
structural_annotation	UHGV-1477650_2	PF12643,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
KOfam	UHGV-1477650_3	K03111	139.1	4.30002e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1477650_3	phrog_44	150.2	9.80909e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1477650_3	UniRef90_D4JEM5	209.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1477650_3	1235796.C815_00133	184.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1477650_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1477650_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1477650_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1477650_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1477650_3	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
Pfam	UHGV-1477650_6	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1477650_6	PF07374,NF008895	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_8	phrog_361	49.0	0.0000000000000066	terminase small subunit	head and packaging
UniRef90	UHGV-1477650_8	UniRef90_A0A3E3E594	137.0	9.94e-40	Terminase	N/A
eggNOG-mapper	UHGV-1477650_8	1235798.C817_04581	85.1	1.04e-19	Phage terminase, small subunit	N/A
Pfam	UHGV-1477650_8	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-1477650_9	phrog_9	308.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1477650_9	UniRef90_A0A1Y4LY94	1160.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1477650_9	1232446.BAIE02000002_gene823	900.0	0	Phage Terminase	N/A
Pfam	UHGV-1477650_9	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1477650_9	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1477650_9	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1477650_9	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_10	phrog_12	175.4	0	portal protein	head and packaging
UniRef90	UHGV-1477650_10	UniRef90_A0A1Y4M075	779.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1477650_10	1232446.BAIE02000002_gene824	550.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1477650_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1477650_10	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1477650_10	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1477650_10	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1477650_11	K06904	152.3	4.2039e-45	N/A	N/A
PHROG	UHGV-1477650_11	phrog_80	176.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1477650_11	UniRef90_A0A1Y4LTW2	373.0	0	Phage prohead protease	N/A
eggNOG-mapper	UHGV-1477650_11	398512.JQKC01000009_gene450	252.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1477650_11	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1477650_11	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1477650_11	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1477650_11	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_12	phrog_10	171.9	0	major head protein	head and packaging
UniRef90	UHGV-1477650_12	UniRef90_A0A1Y4LTW7	924.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1477650_12	999413.HMPREF1094_02008	432.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1477650_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1477650_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1477650_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1477650_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_13	phrog_2550	67.5	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1477650_13	1232446.BAIE02000002_gene827	102.0	1.52e-27	N/A	N/A
structural_annotation	UHGV-1477650_13	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_14	phrog_19734	89.0	5.1e-26	N/A	unknown function
UniRef90	UHGV-1477650_14	UniRef90_A0A3E3E563	141.0	1.88993e-41	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-1477650_14	1232446.BAIE02000002_gene828	96.3	2.72e-24	N/A	N/A
structural_annotation	UHGV-1477650_14	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_15	phrog_78	54.0	0.000000000000003	tail terminator	connector
eggNOG-mapper	UHGV-1477650_15	1232446.BAIE02000002_gene829	93.6	2.55e-23	N/A	N/A
structural_annotation	UHGV-1477650_15	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1477650_16	UniRef90_A0A1C6FG30	82.4	7.03e-17	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1477650_16	1232446.BAIE02000002_gene830	102.0	1.27e-25	N/A	N/A
structural_annotation	UHGV-1477650_16	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_17	phrog_88	77.9	1.1e-22	major tail protein	tail
UniRef90	UHGV-1477650_17	UniRef90_A0A3E3E439	226.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1477650_17	33035.JPJF01000039_gene278	129.0	1.32e-34	N/A	N/A
structural_annotation	UHGV-1477650_17	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_19	phrog_23464	199.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1477650_19	33035.JPJF01000023_gene3232	296.0	0	phage tail tape measure protein	N/A
COG	UHGV-1477650_19	COG5412	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-1477650_20	UniRef90_A0A3E3E586	282.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1477650_20	1232446.BAIE02000002_gene835	202.0	0	phage tail	N/A
NCBIFam	UHGV-1477650_20	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1477650_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1477650_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_21	phrog_1067	296.4	0	minor head protein	head and packaging
UniRef90	UHGV-1477650_21	UniRef90_A0A1Y4LTX2	995.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1477650_21	1232446.BAIE02000002_gene836	521.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1477650_21	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1477650_21	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1477650_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1477650_21	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_22	phrog_8781	47.2	0.00000000000033	endolysin	lysis
UniRef90	UHGV-1477650_22	UniRef90_A0A4V0ET45	102.0	3.22e-24	Phage lysin, N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1477650_22	552396.HMPREF0863_01651	94.0	9.33e-22	lysozyme activity	N/A
COG	UHGV-1477650_22	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1477650_22	PF05382,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1477650_24	phrog_19695	49.9	0.000000000000069	N/A	unknown function
eggNOG-mapper	UHGV-1477650_24	411462.DORLON_00772	72.8	0.00000000000000249	N/A	N/A
structural_annotation	UHGV-1477650_24	PF19714	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1477650_25	1232452.BAIB02000007_gene1610	142.0	2.56e-40	N/A	N/A