UHGV-1478579 (vOTU-164483)

Viral Genome: UHGV-1478579

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1478579
vOTU ID	vOTU-164483
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0133374
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	HMM-based
CheckV completeness	64.46 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9776
Virus hallmark genes (geNomad)	1
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	2.19
Jumbo phage	No

Genome content
Genome length (bp)	18,554
GC content	39.84%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	22
CDS density	89%
Average CDS length (bps)	751.36
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 64.46)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-1478579_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
PHROG	UHGV-1478579_5	phrog_2006	113.1	2.3e-34	major head protein	head and packaging
UniRef90	UHGV-1478579_5	UniRef90_A0A843GM45	72.8	0.000000000324	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1478579_5	10756.CAPSD_BPPH2	102.0	6.83e-21	viral capsid	N/A
structural_annotation	UHGV-1478579_5	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1478579_7	phrog_4898	40.7	0.000000000028	holin	lysis
PHROG	UHGV-1478579_11	phrog_2038	54.5	6.6e-16	upper collar connector	connector
structural_annotation	UHGV-1478579_12	PF20934,PF16838	N/A	N/A	N/A	N/A
UniRef90	UHGV-1478579_14	UniRef90_UPI001D068B5A	68.9	0.000000000239	C40 family peptidase	N/A
eggNOG-mapper	UHGV-1478579_14	411902.CLOBOL_00116	75.9	0.000000000000155	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
Pfam	UHGV-1478579_14	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1478579_14	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1478579_16	PF13604,MF_01488,TIGR01448,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-1478579_18	phrog_2150	84.8	7.3e-25	terminase	head and packaging
KOfam	UHGV-1478579_19	K03111	99.0	7.5e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1478579_19	phrog_44	99.9	3e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1478579_19	UniRef90_A0A373B679	94.0	8.61e-22	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1478579_19	397290.C810_04698	83.6	1.51e-18	Single-strand binding protein family	N/A
Pfam	UHGV-1478579_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1478579_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1478579_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1478579_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1478579_19	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A