UHGV-1483532 (vOTU-010531)

Viral Genome: UHGV-1483532

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1483532
vOTU ID	vOTU-010531
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0258507
Associated BioSample	SAMN05414912
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	54.91
Jumbo phage	No

Genome content
Genome length (bp)	38,183
GC content	46.68%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	93%
Average CDS length (bps)	600.97
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1483532_1	UniRef90_R6GNZ5	100.0	8.62e-23	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1483532_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1483532_1	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1483532_1	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483532_3	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1483532_4	476272.RUMHYD_01770	94.4	2.94e-21	N/A	N/A
PHROG	UHGV-1483532_5	phrog_21718	53.8	0.0000000000000032	N/A	unknown function
eggNOG-mapper	UHGV-1483532_5	397290.C810_05210	60.8	0.000000000672	N/A	N/A
COG	UHGV-1483532_6	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483532_6	PF18341,NF040678,COG4991	N/A	N/A	N/A	N/A
KOfam	UHGV-1483532_7	K01448	97.5	1.5e-28	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1483532_7	phrog_435	128.2	7.9e-38	endolysin	lysis
UniRef90	UHGV-1483532_7	UniRef90_A0A6N7X525	263.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1483532_7	1392487.JIAD01000001_gene506	202.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1483532_7	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1483532_7	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1483532_7	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_8	phrog_1129	77.0	1.3e-22	holin	lysis
UniRef90	UHGV-1483532_8	UniRef90_A0A2S0L5I2	98.6	2.01e-24	Holin	N/A
eggNOG-mapper	UHGV-1483532_8	702450.CUW_0551	66.6	0.00000000000061	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1483532_8	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1483532_8	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1483532_9	1042156.CXIVA_01580	73.6	0.000000000000002	N/A	N/A
structural_annotation	UHGV-1483532_11	PF03422	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_12	phrog_9478	163.4	0	minor tail protein	tail
eggNOG-mapper	UHGV-1483532_12	476272.RUMHYD_02865	208.0	0	N/A	N/A
NCBIFam	UHGV-1483532_12	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1483532_12	PF14594,PF08931,PF20942,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_13	phrog_5163	94.7	5.1e-28	minor tail protein	tail
UniRef90	UHGV-1483532_13	UniRef90_A0A1C5RIA0	325.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1483532_13	1158610.UC3_03184	73.9	0.0000000000145	Phage tail protein	N/A
Pfam	UHGV-1483532_13	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1483532_13	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1483532_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1483532_13	PF05709,PF11614,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_14	phrog_1204	239.7	0	tail protein	tail
UniRef90	UHGV-1483532_14	UniRef90_A0A7Y8VRG3	330.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1483532_14	1158602.I590_00638	234.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1483532_14	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1483532_14	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1483532_14	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1483532_14	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_15	phrog_441	73.4	3.5e-21	tail assembly chaperone	tail
UniRef90	UHGV-1483532_15	UniRef90_F0YWR6	78.2	4.86e-16	N/A	N/A
eggNOG-mapper	UHGV-1483532_15	1232453.BAIF02000011_gene3366	101.0	7.25e-26	N/A	N/A
PHROG	UHGV-1483532_16	phrog_183	62.9	5.8e-18	tail chaperone protein	tail
UniRef90	UHGV-1483532_16	UniRef90_UPI001EDE7A75	112.0	1.33e-29	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1483532_16	476272.RUMHYD_02861	103.0	4.83e-27	Phage tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-1483532_16	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-1483532_16	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_17	phrog_238	180.1	0	major tail protein	tail
UniRef90	UHGV-1483532_17	UniRef90_A0A174PKY3	225.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-1483532_17	476272.RUMHYD_02860	221.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1483532_17	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-1483532_17	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1483532_17	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_18	phrog_176	73.7	2.4e-21	tail terminator	connector
UniRef90	UHGV-1483532_18	UniRef90_A0A3E3JYL5	115.0	7.54e-31	N/A	N/A
eggNOG-mapper	UHGV-1483532_18	1235798.C817_03472	116.0	6.29e-32	N/A	N/A
structural_annotation	UHGV-1483532_18	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_19	phrog_5	49.5	0.000000000000089	tail completion or Neck1 protein	connector
UniRef90	UHGV-1483532_19	UniRef90_UPI00197CA78F	53.5	0.00000122	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1483532_19	1232453.BAIF02000011_gene3362	55.1	0.0000000544	Bacteriophage HK97-gp10, putative tail-component	N/A
NCBIFam	UHGV-1483532_19	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1483532_19	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_20	phrog_348	58.3	1.5e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-1483532_20	476272.RUMHYD_02857	78.2	1.65e-17	N/A	N/A
structural_annotation	UHGV-1483532_20	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_21	phrog_132	78.5	6.5e-23	head-tail adaptor	connector
UniRef90	UHGV-1483532_21	UniRef90_UPI00051BB732	108.0	2.23e-28	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1483532_21	476272.RUMHYD_02856	105.0	3.06e-28	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1483532_21	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1483532_21	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_22	phrog_3673	52.2	0.0000000000000041	Arc-like repressor	transcription regulation
eggNOG-mapper	UHGV-1483532_22	1145276.T479_19965	50.8	0.000000146	N/A	N/A
PHROG	UHGV-1483532_23	phrog_840	420.4	0	major head protein	head and packaging
UniRef90	UHGV-1483532_23	UniRef90_A0A352CVQ3	424.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1483532_23	294382.Q5YA70_9CAUD	356.0	0	N/A	N/A
structural_annotation	UHGV-1483532_23	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_24	phrog_172	108.1	9.5e-32	head scaffolding protein	head and packaging
UniRef90	UHGV-1483532_24	UniRef90_UPI0019607A58	121.0	3.88e-31	N/A	N/A
eggNOG-mapper	UHGV-1483532_24	553184.ATORI0001_1003	88.2	3.17e-19	N/A	N/A
Pfam	UHGV-1483532_24	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1483532_24	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_26	phrog_115	317.4	0	minor head protein	head and packaging
UniRef90	UHGV-1483532_26	UniRef90_UPI001C00D799	341.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1483532_26	476272.RUMHYD_02847	350.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1483532_26	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1483532_26	PF15644	N/A	N/A	Papain fold toxin 1, glutamine deamidase	Gln_amidase
NCBIFam	UHGV-1483532_26	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1483532_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483532_26	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_27	phrog_64	399.6	0	portal protein	head and packaging
UniRef90	UHGV-1483532_27	UniRef90_A0A352CU27	596.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1483532_27	1235796.C815_00925	503.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1483532_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1483532_27	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1483532_27	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1483532_28	K06909	136.4	2.5e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1483532_28	phrog_10250	189.8	0	N/A	unknown function
UniRef90	UHGV-1483532_28	UniRef90_UPI00088B4057	537.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1483532_28	411490.ANACAC_00783	522.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1483532_28	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1483532_28	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1483532_28	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1483532_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1483532_28	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_29	phrog_2412	85.0	8.6e-25	N/A	unknown function
UniRef90	UHGV-1483532_29	UniRef90_UPI001C38E948	110.0	7.92e-29	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-1483532_29	556268.OFAG_00320	73.6	0.000000000000009	N/A	N/A
KOfam	UHGV-1483532_30	K06223	64.7	1.2e-18	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1483532_30	phrog_56	103.9	1.9e-30	DNA methyltransferase	other
UniRef90	UHGV-1483532_30	UniRef90_UPI000E4B6029	154.0	1.79002e-41	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-1483532_30	1688.BCUN_0619	140.0	4.98e-37	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1483532_30	MTase_II_00075	43.7	9e-23	Type II methyltransferase	RM
Pfam	UHGV-1483532_30	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-1483532_30	PF02086,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_32	phrog_7153	42.3	0.0000000000077	zinc-finger protease	other
structural_annotation	UHGV-1483532_32	PF15887,COG4307	N/A	N/A	N/A	N/A
KOfam	UHGV-1483532_33	K03497	67.1	2.6e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1483532_33	phrog_940	413.0	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483532_33	UniRef90_UPI00066D34BE	404.0	0	N/A	N/A
eggNOG-mapper	UHGV-1483532_33	1123302.KB904167_gene511	399.0	0	N/A	N/A
PADLOC	UHGV-1483532_33	MTase_II_00015	91.9	1e-26	Type II methyltransferase	RM
Pfam	UHGV-1483532_33	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1483532_33	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1483532_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1483532_33	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_35	phrog_36	65.9	7.8e-19	transcriptional regulator	transcription regulation
Pfam	UHGV-1483532_35	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1483532_35	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1483532_35	PF04545,PF01920,MF_00674,TIGR01637,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483532_38	PF10944	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_40	phrog_424	59.6	3.7e-17	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1483532_40	UniRef90_A0A0D8IZX4	100.0	4.87e-22	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1483532_40	1235797.C816_03989	58.9	0.000000154	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1483532_40	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-1483532_44	phrog_190	134.5	6.3e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483532_44	UniRef90_A0A6N7XIA3	156.0	0	N/A	N/A
eggNOG-mapper	UHGV-1483532_44	1236514.BAKL01000051_gene3708	108.0	2.27e-29	N/A	N/A
Pfam	UHGV-1483532_44	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1483532_44	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_47	phrog_474	110.8	1.8e-32	phosphofructokinase	other
UniRef90	UHGV-1483532_47	UniRef90_UPI001D174B3C	107.0	2.61e-28	N/A	N/A
eggNOG-mapper	UHGV-1483532_47	1111121.HMPREF1247_0807	89.0	8.01e-22	N/A	N/A
Pfam	UHGV-1483532_47	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1483532_47	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_50	phrog_4880	178.1	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483532_50	UniRef90_R6WQA7	180.0	0	DnaD and phage-associated domain protein	N/A
eggNOG-mapper	UHGV-1483532_50	1122947.FR7_2509	152.0	3.47942e-42	Transcriptional regulator	N/A
Pfam	UHGV-1483532_50	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1483532_50	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1483532_50	COG1802	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-1483532_50	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
KOfam	UHGV-1483532_51	K03111	141.4	9.10003e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1483532_51	phrog_44	140.0	1.49995e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483532_51	UniRef90_A0A6N7XL53	152.0	8.40779e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1483532_51	936375.HMPREF1152_1764	144.0	1.8399e-42	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1483532_51	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1483532_51	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1483532_51	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1483532_51	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1483532_51	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1483532_52	phrog_72	69.5	3.9e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1483532_52	UniRef90_A0A8D9PDS2	112.0	4.47e-28	NinB protein	N/A
eggNOG-mapper	UHGV-1483532_52	445972.ANACOL_01825	100.0	2.14e-24	N/A	N/A
PHROG	UHGV-1483532_53	phrog_7566	102.5	2e-30	N/A	unknown function
UniRef90	UHGV-1483532_53	UniRef90_UPI001C1E3E38	63.2	0.0000000000566	phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1483532_53	1304866.K413DRAFT_1198	80.1	2.19e-18	N/A	N/A
PHROG	UHGV-1483532_54	phrog_14970	260.4	0	N/A	unknown function
UniRef90	UHGV-1483532_54	UniRef90_A0A3P6JH63	214.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1483532_54	411468.CLOSCI_00315	222.0	0	double-strand break repair protein	N/A
COG	UHGV-1483532_54	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1483532_54	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
Pfam	UHGV-1483532_58	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1483532_58	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-1483532_58	COG1910	N/A	N/A	Periplasmic molybdate-binding protein/domain	N/A
structural_annotation	UHGV-1483532_58	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1483532_59	718252.FP2_01130	51.2	0.0000000871	N/A	N/A
structural_annotation	UHGV-1483532_59	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A