UHGV-1483574 (vOTU-141873)

Viral Genome: UHGV-1483574

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1483574
vOTU ID	vOTU-141873
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-4368200
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.04 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9821
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.93
Jumbo phage	No

Genome content
Genome length (bp)	20,881
GC content	39.17%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	24
CDS density	93%
Average CDS length (bps)	810.63
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1483574_1	1504823.CCMM01000008_gene725	62.4	0.00000000000252	N/A	N/A
structural_annotation	UHGV-1483574_1	PF09274,NF008671,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1483574_2	K01448	130.5	1.5e-38	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1483574_2	phrog_435	193.7	0	endolysin	lysis
UniRef90	UHGV-1483574_2	UniRef90_UPI001EE924D3	444.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1483574_2	552396.HMPREF0863_00263	196.0	0	hmm pf01520	N/A
Pfam	UHGV-1483574_2	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1483574_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1483574_2	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_3	phrog_774	57.6	2.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-1483574_3	397290.C810_05225	77.8	1.15e-17	N/A	N/A
PHROG	UHGV-1483574_4	phrog_199	59.3	4.5e-17	holin	lysis
UniRef90	UHGV-1483574_4	UniRef90_E2NU60	291.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1483574_4	742723.HMPREF9477_00889	193.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1483574_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1483574_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1483574_4	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1483574_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_5	phrog_372	240.6	0	tail protein	tail
UniRef90	UHGV-1483574_5	UniRef90_UPI0006C32325	1043.0	0	N/A	N/A
eggNOG-mapper	UHGV-1483574_5	1211844.CBLM010000016_gene1479	209.0	0	N/A	N/A
Pfam	UHGV-1483574_5	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1483574_5	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_6	phrog_18110	41.7	0.000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1483574_6	411465.PEPMIC_00746	90.5	7.68e-18	Prophage endopeptidase tail	N/A
COG	UHGV-1483574_6	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1483574_7	phrog_30133	113.3	2e-33	virion structural protein	head and packaging
UniRef90	UHGV-1483574_7	UniRef90_I7ARM6	285.0	0	N/A	N/A
eggNOG-mapper	UHGV-1483574_7	1504823.CCMM01000008_gene1029	298.0	0	N/A	N/A
structural_annotation	UHGV-1483574_7	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_8	phrog_15074	60.0	1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1483574_8	445974.CLORAM_02919	495.0	0	cellulase activity	N/A
COG	UHGV-1483574_8	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1483574_8	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_9	phrog_1194	84.7	8.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1483574_9	1504823.CCMM01000008_gene1031	187.0	0	N/A	N/A
Pfam	UHGV-1483574_9	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1483574_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_10	phrog_35723	246.1	0	N/A	unknown function
UniRef90	UHGV-1483574_10	UniRef90_A0A6N9L4U2	1510.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1483574_10	650150.ERH_0621	344.0	0	tape measure	N/A
Pfam	UHGV-1483574_10	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1483574_10	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1483574_10	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1483574_11	phrog_183	59.2	7.2e-17	tail chaperone protein	tail
UniRef90	UHGV-1483574_11	UniRef90_UPI0011C9B36A	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-1483574_11	445974.CLORAM_02923	120.0	2.85e-33	N/A	N/A
Pfam	UHGV-1483574_11	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1483574_11	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_12	phrog_158	69.2	8.2e-20	major tail protein	tail
UniRef90	UHGV-1483574_12	UniRef90_A0A6N9L2K6	263.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1483574_12	1211844.CBLM010000016_gene1485	169.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1483574_12	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-1483574_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_13	phrog_78	57.0	3.9e-16	tail terminator	connector
eggNOG-mapper	UHGV-1483574_13	1504823.CCMM01000008_gene1036	142.0	2.13978e-42	N/A	N/A
structural_annotation	UHGV-1483574_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_14	phrog_5	69.1	8.2e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-1483574_14	UniRef90_A0A6N9L3B6	327.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1483574_14	742733.HMPREF9469_01819	149.0	2.12997e-43	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1483574_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1483574_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1483574_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_15	phrog_2168	89.9	2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1483574_15	1280689.AUJC01000003_gene969	77.8	3.57e-17	N/A	N/A
structural_annotation	UHGV-1483574_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_16	phrog_132	42.1	0.000000000013	head-tail adaptor	connector
UniRef90	UHGV-1483574_16	UniRef90_UPI001C101B39	54.3	0.000000262	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1483574_16	1235800.C819_00483	56.6	0.00000000811	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1483574_16	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1483574_16	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_17	phrog_2724	61.0	2.1e-17	N/A	unknown function
UniRef90	UHGV-1483574_17	UniRef90_A0A6N9L4P9	157.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-1483574_17	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1483574_17	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1483574_17	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_18	phrog_422	298.1	0	major head protein	head and packaging
UniRef90	UHGV-1483574_18	UniRef90_A0A2H4JCM6	301.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1483574_18	1211844.CBLM010000016_gene1491	307.0	0	N/A	N/A
structural_annotation	UHGV-1483574_18	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_19	phrog_172	157.0	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1483574_19	UniRef90_A0A6N9L4V5	281.0	0	N/A	N/A
eggNOG-mapper	UHGV-1483574_19	445974.CLORAM_02931	119.0	4.27e-31	N/A	N/A
Pfam	UHGV-1483574_19	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1483574_19	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_20	phrog_3675	113.2	9.3e-34	N/A	unknown function
UniRef90	UHGV-1483574_20	UniRef90_A0A0E4H649	119.0	1.79e-32	YjcQ protein	N/A
eggNOG-mapper	UHGV-1483574_20	1120978.KB894082_gene1061	142.0	2.1594e-42	YjcQ protein	N/A
Pfam	UHGV-1483574_20	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1483574_20	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_22	phrog_115	326.4	0	minor head protein	head and packaging
UniRef90	UHGV-1483574_22	UniRef90_UPI001C387790	742.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1483574_22	1504823.CCMM01000008_gene1046	578.0	0	cell adhesion	N/A
Pfam	UHGV-1483574_22	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1483574_22	PF14424	N/A	N/A	The BURPS668_1122 family of deaminases	Toxin-deaminase
NCBIFam	UHGV-1483574_22	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1483574_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1483574_22	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1483574_23	phrog_64	393.3	0	portal protein	head and packaging
UniRef90	UHGV-1483574_23	UniRef90_A0A6N9L3D6	899.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1483574_23	445974.CLORAM_02935	479.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1483574_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1483574_23	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1483574_23	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1483574_24	K06909	297.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1483574_24	phrog_5653	147.1	7.00649e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1483574_24	UniRef90_A0A6N9L4W9	657.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1483574_24	445974.CLORAM_02936	610.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1483574_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1483574_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-1483574_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1483574_24	PF17288,PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A