UHGV-1484405 (vOTU-035814)

Viral Genome: UHGV-1484405

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1484405
vOTU ID	vOTU-035814
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0184959
Associated BioSample	SAMEA2338677
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	66.11 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9777
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.26
Jumbo phage	No

Genome content
Genome length (bp)	25,432
GC content	30.88%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	31
CDS density	96%
Average CDS length (bps)	784.36
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 66.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1484405_2	PF08005,PF19972	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_4	phrog_11032	95.4	4e-28	tail protein	tail
UniRef90	UHGV-1484405_4	UniRef90_UPI001D12D70D	90.5	9.17e-17	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1484405_4	279006.D9I6I2_9CAUD	79.0	0.000000000000347	virus tail, fiber	N/A
Pfam	UHGV-1484405_4	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1484405_4	PF02002,TIGR04176	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_6	phrog_16573	48.8	0.000000000000052	N/A	unknown function
eggNOG-mapper	UHGV-1484405_6	1321778.HMPREF1982_03560	100.0	3.12e-20	N/A	N/A
Pfam	UHGV-1484405_6	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-1484405_6	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-1484405_7	phrog_1067	304.8	0	minor head protein	head and packaging
UniRef90	UHGV-1484405_7	UniRef90_A0A0E1KW44	369.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1484405_7	1567011.A0A0A7RUI9_9VIRU	259.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1484405_7	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1484405_7	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1484405_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1484405_7	PF14594,TIGR01665,NF041249,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_8	phrog_33	96.6	4.1e-28	distal tail protein Dit	tail
UniRef90	UHGV-1484405_8	UniRef90_A0A0E1KYU8	188.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1484405_8	1567011.A0A0A7RWN1_9VIRU	172.0	0	Phage tail protein	N/A
Pfam	UHGV-1484405_8	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1484405_8	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1484405_8	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1484405_9	K20478	45.8	0.000000000000025	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1484405_9	phrog_1533	690.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1484405_9	UniRef90_UPI0018AC3B12	724.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1484405_9	632245.CLP_1658	423.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1484405_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1484405_9	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1484405_9	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1484405_9	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1484405_10	536233.CLO_1369	73.2	0.00000000000000353	N/A	N/A
structural_annotation	UHGV-1484405_10	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_11	phrog_88	105.1	5.1e-31	major tail protein	tail
UniRef90	UHGV-1484405_11	UniRef90_UPI001F22BC6F	134.0	2.95e-35	phage tail protein	N/A
eggNOG-mapper	UHGV-1484405_11	985762.SAGN_11905	57.4	0.000000426	Phage tail tube protein	N/A
NCBIFam	UHGV-1484405_11	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1484405_11	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_12	phrog_78	44.4	0.0000000000031	tail terminator	connector
eggNOG-mapper	UHGV-1484405_12	536233.CLO_1367	101.0	1.43e-26	N/A	N/A
structural_annotation	UHGV-1484405_12	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_13	phrog_5	47.1	0.00000000000059	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-1484405_13	632245.CLP_2691	72.8	0.0000000000000196	N/A	N/A
structural_annotation	UHGV-1484405_13	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-1484405_14	UniRef90_A0A1I7G2Z2	79.3	7.69e-17	Head-tail adaptor	N/A
eggNOG-mapper	UHGV-1484405_14	632245.CLP_2692	62.0	0.0000000000756	Phage head-tail joining protein	N/A
Pfam	UHGV-1484405_14	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1484405_14	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_15	phrog_40	42.9	0.0000000000068	head-tail adaptor Ad1	connector
UniRef90	UHGV-1484405_15	UniRef90_A0A416J1B1	89.4	2.59e-21	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1484405_15	632245.CLP_2916	78.2	1.13e-17	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1484405_15	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1484405_15	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1484405_15	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_16	phrog_10	189.2	0	major head protein	head and packaging
UniRef90	UHGV-1484405_16	UniRef90_K6D6D8	347.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1484405_16	1196031.ALEG01000039_gene1816	306.0	0	Phage capsid family	N/A
Pfam	UHGV-1484405_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1484405_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1484405_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1484405_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1484405_17	K06904	88.3	1.1e-25	N/A	N/A
PHROG	UHGV-1484405_17	phrog_80	110.5	2.1e-32	head maturation protease	head and packaging
UniRef90	UHGV-1484405_17	UniRef90_L1QEZ9	204.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1484405_17	545697.HMPREF0216_01743	204.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1484405_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1484405_17	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1484405_17	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1484405_17	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_18	phrog_12	235.0	0	portal protein	head and packaging
UniRef90	UHGV-1484405_18	UniRef90_UPI000A002DC7	344.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1484405_18	1285586.H131_21312	325.0	0	Portal protein	N/A
Pfam	UHGV-1484405_18	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1484405_18	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1484405_18	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1484405_18	PF04860,PF08184,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_19	phrog_9	251.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1484405_19	UniRef90_K6DIF2	674.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1484405_19	1196031.ALEG01000039_gene1812	666.0	0	Terminase	N/A
Pfam	UHGV-1484405_19	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1484405_19	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1484405_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1484405_19	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_20	phrog_83	78.7	8.3e-23	terminase small subunit	head and packaging
UniRef90	UHGV-1484405_20	UniRef90_A0A8A2NXQ8	140.0	2.26e-39	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-1484405_20	1196031.ALEG01000039_gene1811	123.0	1.27e-33	Phage terminase, small subunit	N/A
Pfam	UHGV-1484405_20	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-1484405_20	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-1484405_20	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1484405_20	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_21	phrog_144	70.9	2e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484405_21	UniRef90_C3WAW7	80.5	1.09e-16	HNH endonuclease domain family protein	N/A
eggNOG-mapper	UHGV-1484405_21	632245.CLP_2922	103.0	1.54e-26	N/A	N/A
PHROG	UHGV-1484405_22	phrog_36	40.9	0.000000000039	transcriptional regulator	transcription regulation
UniRef90	UHGV-1484405_22	UniRef90_A0A1C6JMI4	172.0	0	Alternative sigma factor RpoH	N/A
eggNOG-mapper	UHGV-1484405_22	1414720.CBYM010000002_gene578	172.0	0	N/A	N/A
structural_annotation	UHGV-1484405_22	PF04545,MF_00683,NF008895	N/A	N/A	N/A	N/A
KOfam	UHGV-1484405_23	K01160	51.9	0.000000000000018	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1484405_23	phrog_140	120.5	1.1e-35	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484405_23	UniRef90_UPI00058DBBAF	193.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1484405_23	1499683.CCFF01000014_gene3920	193.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1484405_23	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1484405_23	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1484405_23	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_24	phrog_1389	48.3	0.00000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1484405_24	1033737.CAEV01000076_gene535	53.1	0.000000221	N/A	N/A
structural_annotation	UHGV-1484405_24	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_25	phrog_2205	122.5	2.2e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484405_25	UniRef90_UPI001AE7AE43	154.0	8.40779e-45	host-nuclease inhibitor Gam family protein	N/A
eggNOG-mapper	UHGV-1484405_25	1415774.U728_1122	150.0	5.04467e-44	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-1484405_25	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-1484405_25	PF07352	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1484405_26	PF19849	N/A	N/A	N/A	N/A
PHROG	UHGV-1484405_27	phrog_14970	280.5	0	N/A	unknown function
UniRef90	UHGV-1484405_27	UniRef90_UPI00123F00F5	218.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1484405_27	411470.RUMGNA_02193	201.0	0	double-strand break repair protein	N/A
Pfam	UHGV-1484405_27	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1484405_27	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1484405_27	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A