UHGV-1484745 (vOTU-035820)

Viral Genome: UHGV-1484745

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1484745
vOTU ID	vOTU-035820
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0192157
Associated BioSample	SAMEA3136695
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	68.78 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9765
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.27
Jumbo phage	No

Genome content
Genome length (bp)	26,611
GC content	29.17%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	94%
Average CDS length (bps)	831.40
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1484745_1	phrog_199	67.2	1.9e-19	holin	lysis
UniRef90	UHGV-1484745_1	UniRef90_UPI00140FD175	219.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1484745_1	1232449.BAHV02000008_gene653	166.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1484745_1	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1484745_1	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1484745_1	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1484745_1	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_2	phrog_16573	63.0	1.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1484745_2	880073.Calab_2766	96.7	1.64e-17	oxidoreductase activity	N/A
Pfam	UHGV-1484745_2	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-1484745_2	COG2304	N/A	N/A	Secreted protein containing bacterial Ig-like domain and vWFA domain	N/A
PHROG	UHGV-1484745_3	phrog_1067	269.7	0	minor head protein	head and packaging
UniRef90	UHGV-1484745_3	UniRef90_UPI00164A835E	828.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1484745_3	1292035.H476_1004	390.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1484745_3	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1484745_3	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1484745_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1484745_3	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1484745_4	UniRef90_UPI000DD01D50	174.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1484745_4	1280689.AUJC01000011_gene1531	167.0	0	phage tail	N/A
Pfam	UHGV-1484745_4	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1484745_4	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1484745_4	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1484745_4	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1484745_5	K10421	99.9	8.8e-30	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1484745_5	phrog_1533	434.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1484745_5	UniRef90_UPI00164B849B	820.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1484745_5	1151292.QEW_0351	396.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1484745_5	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1484745_5	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1484745_5	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1484745_5	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1484745_6	1476973.JMMB01000007_gene1770	75.1	0.0000000000000181	N/A	N/A
PHROG	UHGV-1484745_7	phrog_88	116.0	2.7e-34	major tail protein	tail
UniRef90	UHGV-1484745_7	UniRef90_B1V2P3	221.0	0	Phage major tail protein, Phi13 family	N/A
eggNOG-mapper	UHGV-1484745_7	1201292.DR75_1505	58.9	0.0000000983	Maj_tail_phi13 phage major tail , phi13 family protein	N/A
NCBIFam	UHGV-1484745_7	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1484745_7	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1484745_7	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_8	phrog_78	45.5	0.0000000000014	tail terminator	connector
eggNOG-mapper	UHGV-1484745_8	1487921.DP68_11350	55.8	0.0000000145	N/A	N/A
structural_annotation	UHGV-1484745_8	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_9	phrog_5	50.8	0.000000000000044	tail completion or Neck1 protein	connector
UniRef90	UHGV-1484745_9	UniRef90_UPI00164C9F08	136.0	6.26e-39	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1484745_9	1476973.JMMB01000007_gene1766	66.2	0.00000000000319	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1484745_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1484745_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1484745_9	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_10	phrog_11176	194.6	0	head-tail adaptor	connector
UniRef90	UHGV-1484745_10	UniRef90_UPI00164ACD7E	303.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1484745_10	1347392.CCEZ01000045_gene13	67.4	0.00000000000815	N/A	N/A
Pfam	UHGV-1484745_10	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1484745_10	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1484745_10	PF05521,PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_11	phrog_749	62.0	8.8e-18	N/A	unknown function
UniRef90	UHGV-1484745_11	UniRef90_A0A1I3QJG6	112.0	2.53e-30	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1484745_11	349161.Dred_2603	61.2	0.0000000000714	N/A	N/A
PHROG	UHGV-1484745_12	phrog_10	100.0	2.8e-29	major head protein	head and packaging
UniRef90	UHGV-1484745_12	UniRef90_UPI00164AB0C3	652.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1484745_12	1211817.CCAT010000053_gene2132	338.0	0	Phage capsid family	N/A
Pfam	UHGV-1484745_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1484745_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1484745_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1484745_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1484745_13	K01358	123.0	3.3e-36	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1484745_13	phrog_94	210.2	0	head maturation protease	head and packaging
UniRef90	UHGV-1484745_13	UniRef90_A0A316S6S6	349.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1484745_13	1235792.C808_00085	239.0	0	Clp protease	N/A
Pfam	UHGV-1484745_13	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1484745_13	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1484745_13	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_14	phrog_12	97.0	1.8e-28	portal protein	head and packaging
UniRef90	UHGV-1484745_14	UniRef90_UPI00164CC1C1	525.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1484745_14	86416.Clopa_0339	243.0	0	Phage portal protein	N/A
Pfam	UHGV-1484745_14	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1484745_14	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1484745_14	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1484745_14	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_15	phrog_9	274.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1484745_15	UniRef90_UPI00164CCF79	1044.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1484745_15	1235798.C817_02581	557.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1484745_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1484745_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1484745_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1484745_15	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_16	phrog_5110	88.2	6.7e-26	terminase small subunit	head and packaging
UniRef90	UHGV-1484745_16	UniRef90_UPI00164B2843	288.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-1484745_16	574375.BAGA_00220	125.0	1.39e-33	Phage terminase, small subunit	N/A
Pfam	UHGV-1484745_16	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1484745_16	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1484745_16	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_17	phrog_1315	54.7	0.0000000000000017	N/A	unknown function
PHROG	UHGV-1484745_18	phrog_36	45.6	0.0000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-1484745_18	UniRef90_A0A1G9I4W9	114.0	6.17e-29	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-1484745_18	1196322.A370_01361	223.0	0	DNA-templated transcription, initiation	N/A
COG	UHGV-1484745_18	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-1484745_18	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_19	phrog_25509	106.0	1.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-1484745_19	1280689.AUJC01000003_gene942	134.0	1.8e-39	N/A	N/A
PHROG	UHGV-1484745_21	phrog_1672	112.3	2.4e-33	N/A	unknown function
UniRef90	UHGV-1484745_21	UniRef90_A0A3P6KCP8	137.0	3.59e-39	N/A	N/A
eggNOG-mapper	UHGV-1484745_21	632245.CLP_2710	131.0	1.66e-37	N/A	N/A
KOfam	UHGV-1484745_24	K03497	96.7	4.4e-28	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1484745_24	phrog_4715	200.3	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484745_24	UniRef90_UPI001783B16D	486.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1484745_24	1196322.A370_05736	275.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-1484745_24	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1484745_24	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1484745_24	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_25	phrog_98	51.5	0.000000000000017	N/A	unknown function
UniRef90	UHGV-1484745_25	UniRef90_UPI0007743819	149.0	6.86636e-44	YopX family protein	N/A
eggNOG-mapper	UHGV-1484745_25	1196322.A370_05737	143.0	2.56017e-42	YopX protein	N/A
Pfam	UHGV-1484745_25	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1484745_25	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1484745_27	K03496	211.1	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1484745_27	phrog_164	157.6	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484745_27	UniRef90_UPI001782A302	389.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-1484745_27	1415774.U728_486	338.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-1484745_27	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1484745_27	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1484745_27	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_28	phrog_824	146.7	6.86636e-44	N/A	unknown function
UniRef90	UHGV-1484745_28	UniRef90_UPI0018AB58EB	201.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1484745_28	1414720.CBYM010000002_gene588	194.0	0	VRR-NUC domain	N/A
Pfam	UHGV-1484745_28	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1484745_28	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-1484745_29	phrog_1065	140.2	8.80015e-42	N/A	unknown function
UniRef90	UHGV-1484745_29	UniRef90_A0A161XG28	67.4	0.0000000000737	HTH DNA binding domain protein	N/A
eggNOG-mapper	UHGV-1484745_29	1443122.Z958_p0016	75.1	0.00000000000000821	N/A	N/A
PHROG	UHGV-1484745_30	phrog_3584	148.1	5.74532e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1484745_30	1414720.CBYM010000002_gene589	275.0	0	N/A	N/A