UHGV-1484987 (vOTU-064388)

Viral Genome: UHGV-1484987

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1484987
vOTU ID	vOTU-064388
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0264860
Associated BioSample	SAMN02334140
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9789
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.24
Jumbo phage	No

Genome content
Genome length (bp)	39,304
GC content	51.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	58
CDS density	96%
Average CDS length (bps)	650.22
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1484987_3	UniRef90_A0A8D9PDQ6	136.0	8.16004e-41	Restriction alleviation protein	N/A
Pfam	UHGV-1484987_3	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1484987_3	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_5	phrog_3777	81.3	7.4e-24	N/A	unknown function
UniRef90	UHGV-1484987_5	UniRef90_A0A417F883	152.0	5.60519e-45	N/A	N/A
eggNOG-mapper	UHGV-1484987_5	411462.DORLON_00813	66.6	0.00000000000216	N/A	N/A
Pfam	UHGV-1484987_5	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-1484987_5	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_11	phrog_36	41.6	0.000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-1484987_11	UniRef90_UPI001D0837DD	114.0	7.11e-30	N/A	N/A
eggNOG-mapper	UHGV-1484987_11	428125.CLOLEP_01806	89.4	1.35e-20	N/A	N/A
structural_annotation	UHGV-1484987_11	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_13	phrog_7339	102.8	3.1e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484987_13	UniRef90_A0A2V2GLL9	533.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1484987_13	1150474.JQJI01000006_gene784	94.4	3.71e-20	metallophosphoesterase	N/A
Pfam	UHGV-1484987_13	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1484987_13	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1484987_13	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1484987_14	UniRef90_A0A8D9UHF6	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-1484987_14	272630.MexAM1_META1p3985	56.6	0.00000000407	N/A	N/A
Pfam	UHGV-1484987_14	PF18932	N/A	N/A	N/A	DUF5681
KOfam	UHGV-1484987_15	K06909	139.5	3.00004e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1484987_15	phrog_979	164.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1484987_15	UniRef90_A0A8D9UH35	943.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1484987_15	1232449.BAHV02000016_gene1824	480.0	0	N/A	N/A
Pfam	UHGV-1484987_15	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1484987_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1484987_15	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_17	phrog_156	168.5	0	portal protein	head and packaging
UniRef90	UHGV-1484987_17	UniRef90_A0A8D9UHD1	1117.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1484987_17	1121091.AUMP01000003_gene2583	366.0	0	N/A	N/A
structural_annotation	UHGV-1484987_17	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1484987_18	UniRef90_A0A8D9UHD6	128.0	5.95e-38	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-1484987_18	PF20020	N/A	N/A	N/A	N/A
UniRef90	UHGV-1484987_19	UniRef90_A0A8D9UHB9	417.0	0	Non-structural protein 5	N/A
PHROG	UHGV-1484987_20	phrog_1357	245.2	0	major head protein	head and packaging
UniRef90	UHGV-1484987_20	UniRef90_A0A8D9UHB3	591.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1484987_20	696281.Desru_1092	291.0	0	N/A	N/A
NCBIFam	UHGV-1484987_20	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1484987_20	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_21	phrog_15239	41.8	0.000000000012	N/A	unknown function
PHROG	UHGV-1484987_23	phrog_3287	133.6	1.1e-39	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1484987_23	665956.HMPREF1032_03917	480.0	0	N/A	N/A
structural_annotation	UHGV-1484987_23	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-1484987_24	K19721	188.6	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1484987_24	phrog_819	145.9	0	tail protein	tail
UniRef90	UHGV-1484987_24	UniRef90_A0A8D9PE13	780.0	0	Virion structural protein	N/A
Pfam	UHGV-1484987_24	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1484987_24	COG4675	N/A	N/A	Phage tail collar domain	N/A
KOfam	UHGV-1484987_25	K10461	65.2	1.7e-19	KLHL24_35; kelch-like protein 24/35	N/A
PHROG	UHGV-1484987_25	phrog_12615	44.1	1.2e-16	N/A	unknown function
Pfam	UHGV-1484987_25	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
Pfam	UHGV-1484987_25	PF13964	N/A	N/A	Kelch motif	Kelch_6
structural_annotation	UHGV-1484987_25	PF07250,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
UniRef90	UHGV-1484987_26	UniRef90_A0A8D9UHD8	67.4	0.0000000195	mRNA splicing protein	N/A
structural_annotation	UHGV-1484987_26	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_28	phrog_27545	120.0	1.6e-35	N/A	unknown function
UniRef90	UHGV-1484987_28	UniRef90_A0A2V2GQB6	279.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1484987_28	411471.SUBVAR_06976	140.0	5.54998e-41	N/A	N/A
Pfam	UHGV-1484987_28	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1484987_29	phrog_37604	63.1	4.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1484987_29	457412.RSAG_01109	62.0	0.000000000286	N/A	N/A
KOfam	UHGV-1484987_31	K01448	55.7	7.2e-16	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1484987_31	phrog_435	67.3	3e-19	endolysin	lysis
UniRef90	UHGV-1484987_31	UniRef90_A0A2V2GRI9	436.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1484987_31	994573.T472_0210960	99.0	1.66e-22	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1484987_31	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1484987_31	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1484987_31	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1484987_32	MF_01304	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_33	phrog_31411	58.2	6e-17	N/A	unknown function
UniRef90	UHGV-1484987_33	UniRef90_A0A8D9UHE1	3367.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1484987_33	1408437.JNJN01000060_gene452	433.0	0	heme binding	N/A
Pfam	UHGV-1484987_33	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-1484987_33	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-1484987_33	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-1484987_34	K14059	205.6	0	int; integrase	N/A
PHROG	UHGV-1484987_34	phrog_1	181.6	0	integrase	integration and excision
UniRef90	UHGV-1484987_34	UniRef90_A0A8D9PE11	348.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1484987_34	693746.OBV_01970	156.0	2.37997e-41	Phage integrase family	N/A
Pfam	UHGV-1484987_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1484987_34	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1484987_34	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_37	phrog_8	40.5	0.000000000055	transcriptional regulator	transcription regulation
UniRef90	UHGV-1484987_37	UniRef90_A0A372V3Y4	91.7	7.87e-22	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1484987_37	1378168.N510_01712	78.2	4.01e-16	N/A	N/A
UniRef90	UHGV-1484987_38	UniRef90_A0A372V3V8	67.0	0.000000000000271	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-1484987_38	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1484987_43	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_46	phrog_4433	248.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1484987_46	767434.Fraau_1460	120.0	4.99e-30	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1484987_46	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-1484987_48	phrog_14970	200.7	0	N/A	unknown function
UniRef90	UHGV-1484987_48	UniRef90_UPI00123F00F5	180.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1484987_48	428127.EUBDOL_01248	155.0	7.00649e-45	double-strand break repair protein	N/A
Pfam	UHGV-1484987_48	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1484987_48	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1484987_48	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_49	phrog_72	56.9	2.6e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484987_49	UniRef90_A0A8D9PDS2	164.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1484987_49	445972.ANACOL_01825	142.0	1.15e-40	N/A	N/A
structural_annotation	UHGV-1484987_49	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_50	phrog_7566	51.6	0.000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1484987_50	693746.OBV_24070	68.9	0.000000000000161	N/A	N/A
PHROG	UHGV-1484987_51	phrog_757	189.5	0	DNA methyltransferase	other
UniRef90	UHGV-1484987_51	UniRef90_A0A374BFJ7	203.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1484987_51	1235790.C805_00032	241.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1484987_51	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1484987_51	PF04445,MF_00341,TIGR00537,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1484987_52	K03111	132.9	3.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1484987_52	phrog_44	138.0	6.20005e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484987_52	UniRef90_UPI001E2A5A6F	228.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1484987_52	1235835.C814_01372	125.0	6.3e-35	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1484987_52	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1484987_52	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1484987_52	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1484987_52	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1484987_52	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_53	phrog_16304	73.3	3.7e-21	N/A	unknown function
UniRef90	UHGV-1484987_53	UniRef90_UPI001E560709	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-1484987_53	290402.Cbei_3733	61.6	0.0000000135	DnaD domain protein	N/A
Pfam	UHGV-1484987_53	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1484987_53	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1484987_53	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1484987_54	phrog_9804	161.9	0	N/A	unknown function
UniRef90	UHGV-1484987_54	UniRef90_UPI001E312ACC	359.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1484987_54	1121344.JHZO01000003_gene981	177.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1484987_54	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1484987_54	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1484987_55	K00390	48.0	1.1e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1484987_55	phrog_424	107.0	4.2e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1484987_55	UniRef90_UPI00189E7983	498.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1484987_55	1291050.JAGE01000002_gene3264	456.0	0	sulfate reduction	N/A
Pfam	UHGV-1484987_55	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1484987_55	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1484987_55	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1484987_56	K01160	62.5	1.2e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1484987_56	phrog_34	67.1	3.1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1484987_56	UniRef90_A0A498CNH4	145.0	3.86758e-43	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1484987_56	477974.Daud_0813	51.6	0.00000254	N/A	N/A
Pfam	UHGV-1484987_56	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1484987_56	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A