UHGV-1486964 (vOTU-119233)

Viral Genome: UHGV-1486964

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1486964
vOTU ID	vOTU-119233
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0199508
Associated BioSample	SAMEA2737907
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	69.21 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	32
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9829
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	61.95
Jumbo phage	No

Genome content
Genome length (bp)	27,886
GC content	40.62%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	92%
Average CDS length (bps)	625.76
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1486964_1	phrog_374	79.8	1e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486964_1	UniRef90_X8KCI4	276.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-1486964_1	936580.HMPREF1516_0698	276.0	0	N/A	N/A
AcrCatalog	UHGV-1486964_1	cluster_10901	110.0	3.7e-33	NA	N/A
structural_annotation	UHGV-1486964_1	PF17375	N/A	N/A	N/A	N/A
KOfam	UHGV-1486964_3	K00689	43.6	0.0000000000000086	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1486964_3	phrog_7854	151.8	4.2039e-45	endolysin	lysis
UniRef90	UHGV-1486964_3	UniRef90_A0A428EC62	518.0	0	Autolysin	N/A
eggNOG-mapper	UHGV-1486964_3	585203.SMSK564_1271	481.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1486964_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1486964_3	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1486964_3	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1486964_3	PF01510,PF19127,MF_04111,TIGR04035,NF008758,COG5263,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_4	phrog_608	143.9	3.9937e-43	holin	lysis
UniRef90	UHGV-1486964_4	UniRef90_UPI001CBF2642	177.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1486964_4	936580.HMPREF1516_0703	176.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1486964_4	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1486964_4	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1486964_5	phrog_21950	139.7	2.49992e-42	N/A	unknown function
UniRef90	UHGV-1486964_5	UniRef90_UPI00085BE04A	100.0	1.03e-25	BhlA/UviB family holin-like peptide	N/A
eggNOG-mapper	UHGV-1486964_5	1214217.ALNF01000014_gene1360	147.0	5.60519e-45	N/A	N/A
Pfam	UHGV-1486964_5	PF10960	N/A	N/A	BhlA holin family	Holin_BhlA
PHROG	UHGV-1486964_6	phrog_1554	192.4	0	N/A	unknown function
UniRef90	UHGV-1486964_6	UniRef90_UPI001B9C9A73	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486964_6	1000588.HMPREF9965_1687	358.0	0	N/A	N/A
structural_annotation	UHGV-1486964_6	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_7	phrog_12683	120.7	4.5e-36	N/A	unknown function
UniRef90	UHGV-1486964_7	UniRef90_A0A081R6K4	110.0	1.98e-30	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1486964_7	1000588.HMPREF9965_1688	107.0	7.84e-30	N/A	N/A
PHROG	UHGV-1486964_8	phrog_9680	809.1	0	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1486964_8	UniRef90_X8KFI9	1552.0	0	Endosialidase chaperone	N/A
eggNOG-mapper	UHGV-1486964_8	936580.HMPREF1516_0707	1552.0	0	N/A	N/A
Pfam	UHGV-1486964_8	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1486964_8	PF14594,PF03944,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_9	phrog_1194	155.6	0	N/A	unknown function
UniRef90	UHGV-1486964_9	UniRef90_G0IA27	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486964_9	936580.HMPREF1516_0708	228.0	0	N/A	N/A
Pfam	UHGV-1486964_9	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1486964_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_10	phrog_1535	776.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1486964_10	UniRef90_F9LWB1	1316.0	0	TMP repeat protein	N/A
eggNOG-mapper	UHGV-1486964_10	936580.HMPREF1516_0709	1410.0	0	phage tail tape measure protein	N/A
COG	UHGV-1486964_10	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1486964_10	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_11	phrog_2066	129.8	9.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-1486964_11	1123304.AQYA01000037_gene232	119.0	2.75e-33	N/A	N/A
PHROG	UHGV-1486964_12	phrog_183	51.1	0.000000000000024	tail chaperone protein	tail
UniRef90	UHGV-1486964_12	UniRef90_UPI0005E2C73B	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486964_12	1123304.AQYA01000037_gene231	135.0	1.62e-39	N/A	N/A
Pfam	UHGV-1486964_12	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1486964_12	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_13	phrog_158	90.3	3.2e-26	major tail protein	tail
UniRef90	UHGV-1486964_13	UniRef90_A0A0X8JWF6	244.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1486964_13	1000588.HMPREF9965_1694	245.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1486964_13	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1486964_13	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_14	phrog_78	81.5	9.6e-24	tail terminator	connector
eggNOG-mapper	UHGV-1486964_14	1000588.HMPREF9965_1695	245.0	0	N/A	N/A
structural_annotation	UHGV-1486964_14	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_15	phrog_5	98.2	9.3e-29	tail completion or Neck1 protein	connector
UniRef90	UHGV-1486964_15	UniRef90_F9PCF7	312.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1486964_15	936580.HMPREF1516_0714	316.0	0	N/A	N/A
Pfam	UHGV-1486964_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1486964_15	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1486964_15	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_16	phrog_2168	143.2	5.70328e-43	N/A	unknown function
eggNOG-mapper	UHGV-1486964_16	1054460.SPPN_00190	173.0	0	N/A	N/A
structural_annotation	UHGV-1486964_16	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_17	phrog_132	69.9	2.9e-20	head-tail adaptor	connector
UniRef90	UHGV-1486964_17	UniRef90_X8KD93	189.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1486964_17	936580.HMPREF1516_0716	189.0	0	N/A	N/A
Pfam	UHGV-1486964_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1486964_17	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_18	phrog_933	71.2	1e-20	N/A	unknown function
PHROG	UHGV-1486964_19	phrog_422	276.9	0	major head protein	head and packaging
UniRef90	UHGV-1486964_19	UniRef90_A0A139QKV4	632.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1486964_19	997830.HMPREF1124_0598	618.0	0	N/A	N/A
Pfam	UHGV-1486964_19	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1486964_19	PF19821,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_20	phrog_172	157.5	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1486964_20	UniRef90_A0A3A4MPM0	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486964_20	1000588.HMPREF9965_1701	279.0	0	N/A	N/A
Pfam	UHGV-1486964_20	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1486964_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_21	phrog_774	76.4	4.5e-22	N/A	unknown function
UniRef90	UHGV-1486964_21	UniRef90_A0A0B7LQN3	133.0	1.42e-39	N/A	N/A
eggNOG-mapper	UHGV-1486964_21	397290.C810_05225	60.1	0.0000000000701	N/A	N/A
PHROG	UHGV-1486964_23	phrog_918	112.0	2.1e-33	N/A	unknown function
UniRef90	UHGV-1486964_23	UniRef90_UPI0007650EB7	153.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486964_23	413066.A1EAE7_9CAUD	150.0	0	N/A	N/A
Pfam	UHGV-1486964_23	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1486964_23	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_24	phrog_5469	65.0	1.2e-18	N/A	unknown function
PHROG	UHGV-1486964_26	phrog_2841	497.5	0	minor head protein	head and packaging
UniRef90	UHGV-1486964_26	UniRef90_A0A428HG90	960.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-1486964_26	997830.HMPREF1124_0595	637.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1486964_26	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1486964_26	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
NCBIFam	UHGV-1486964_26	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1486964_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1486964_26	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_27	phrog_64	436.7	0	portal protein	head and packaging
UniRef90	UHGV-1486964_27	UniRef90_F9LWC5	864.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1486964_27	936580.HMPREF1516_0724	872.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1486964_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1486964_27	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1486964_27	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1486964_28	K06909	118.9	4.3e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1486964_28	phrog_5653	147.6	4.76441e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1486964_28	UniRef90_A0A0T7K7A1	768.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1486964_28	1054460.SPPN_00135	768.0	0	Phage terminase, large subunit	N/A
NCBIFam	UHGV-1486964_28	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1486964_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1486964_28	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_29	phrog_1595	193.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-1486964_29	UniRef90_A0A3R9KTU9	262.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1486964_29	764291.STRUR_2109	208.0	0	N/A	N/A
Pfam	UHGV-1486964_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-1486964_29	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_30	phrog_36	111.7	5.3e-33	transcriptional regulator	transcription regulation
UniRef90	UHGV-1486964_30	UniRef90_A0A064C5U2	278.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486964_30	1214217.ALNF01000014_gene1384	258.0	0	N/A	N/A
Pfam	UHGV-1486964_30	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1486964_30	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_31	phrog_803	49.1	0.00000000000011	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1486964_31	UniRef90_A0A0T8NPR6	61.2	0.0000000000477	N/A	N/A
PHROG	UHGV-1486964_32	phrog_26128	371.9	0	N/A	unknown function
UniRef90	UHGV-1486964_32	UniRef90_UPI00066A74D4	336.0	0	restriction endonuclease subunit S	N/A
eggNOG-mapper	UHGV-1486964_32	1282664.H354_07625	315.0	0	type I restriction modification DNA specificity domain	N/A
PADLOC	UHGV-1486964_32	Specificity_I_00048	52.6	0.000000000000011	Type I specificity subunit	RM
Pfam	UHGV-1486964_32	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
COG	UHGV-1486964_32	COG0732	N/A	N/A	Restriction endonuclease S subunit	N/A
structural_annotation	UHGV-1486964_32	PF01420,COG0732	N/A	N/A	N/A	N/A
KOfam	UHGV-1486964_33	K07317	51.2	0.000000000000015	K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1486964_33	phrog_6380	269.0	0	DNA methyltransferase	other
UniRef90	UHGV-1486964_33	UniRef90_K8MLL8	548.0	0	N6_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-1486964_33	1282664.H354_07620	546.0	0	COG0286 Type I restriction-modification system methyltransferase subunit	N/A
Pfam	UHGV-1486964_33	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1486964_33	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1486964_33	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_34	phrog_9055	110.7	2.6e-33	N/A	unknown function
UniRef90	UHGV-1486964_34	UniRef90_A0A2N9ZZ49	159.0	0	Gp27	N/A
eggNOG-mapper	UHGV-1486964_34	365659.smi_0433	160.0	0	N/A	N/A
Pfam	UHGV-1486964_34	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1486964_34	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_35	phrog_4667	101.1	3.8e-30	N/A	unknown function
UniRef90	UHGV-1486964_35	UniRef90_A0A060QNR9	89.0	2.65e-22	N/A	N/A
PHROG	UHGV-1486964_36	phrog_4252	98.4	2.4e-29	N/A	unknown function
UniRef90	UHGV-1486964_36	UniRef90_A0A060QNF3	53.1	0.0000000248	N/A	N/A
PHROG	UHGV-1486964_38	phrog_121	117.9	7.2e-35	N/A	unknown function
UniRef90	UHGV-1486964_38	UniRef90_UPI0015637F62	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486964_38	768726.HMPREF9178_1077	162.0	0	N/A	N/A
Pfam	UHGV-1486964_38	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1486964_38	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_39	phrog_827	219.6	0	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486964_39	UniRef90_UPI0013FD8A22	242.0	0	crossover junction endodeoxyribonuclease RuvC	N/A
Pfam	UHGV-1486964_39	PF07066	N/A	N/A	Lactococcus phage M3 protein	DUF3882
structural_annotation	UHGV-1486964_39	PF07066,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-1486964_40	phrog_1341	99.2	2.9e-29	N/A	unknown function
UniRef90	UHGV-1486964_40	UniRef90_A0A0Y3MU61	134.0	7.11e-39	N/A	N/A
eggNOG-mapper	UHGV-1486964_40	997830.HMPREF1124_0584	138.0	1.76998e-41	N/A	N/A
KOfam	UHGV-1486964_41	K00558	84.1	1.3e-24	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1486964_41	phrog_26324	172.4	0	DNA methyltransferase	other
UniRef90	UHGV-1486964_41	UniRef90_A0A3R9K1L0	416.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1486964_41	1123309.AQYB01000007_gene1896	338.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1486964_41	MTase_II_00058	80.4	6e-24	Type II methyltransferase	RM
Pfam	UHGV-1486964_41	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1486964_41	COG0270	N/A	N/A	DNA-cytosine methylase	N/A