UHGV-1491540 (vOTU-070659)

Viral Genome: UHGV-1491540

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1491540
vOTU ID	vOTU-070659
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0264191
Associated BioSample	SAMN05826954
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.47 (High-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9756
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.59
Jumbo phage	No

Genome content
Genome length (bp)	39,187
GC content	41.38%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	96%
Average CDS length (bps)	833.13
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1491540_1	phrog_10089	1264.7	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1491540_1	UniRef90_A0A3D1LAM6	1693.0	0	Helicase ATP-binding domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1491540_1	689781.AUJX01000003_gene2804	847.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-1491540_1	DrmD_00004	42.8	0.000000000000083	DrmD	DISARM
Pfam	UHGV-1491540_1	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1491540_1	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1491540_1	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
eggNOG-mapper	UHGV-1491540_2	1203606.HMPREF1526_02741	106.0	3.07e-22	N/A	N/A
PHROG	UHGV-1491540_4	phrog_511	235.8	0	internal virion protein	head and packaging
UniRef90	UHGV-1491540_4	UniRef90_A0A8D9UH72	335.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-1491540_4	1519439.JPJG01000060_gene1903	367.0	0	N/A	N/A
structural_annotation	UHGV-1491540_4	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_5	phrog_12105	117.1	9.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-1491540_5	1226322.HMPREF1545_03850	84.7	1.75e-19	N/A	N/A
KOfam	UHGV-1491540_6	K17733	124.4	8.6e-37	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-1491540_6	phrog_6523	133.1	2.4e-39	endolysin	lysis
UniRef90	UHGV-1491540_6	UniRef90_A0A2G3Q1P4	186.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1491540_6	642492.Clole_1880	159.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-1491540_6	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-1491540_6	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-1491540_6	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_7	phrog_9467	191.2	0	N/A	unknown function
UniRef90	UHGV-1491540_7	UniRef90_UPI0018C8333C	151.0	1.68156e-44	Gp49 family protein	N/A
eggNOG-mapper	UHGV-1491540_7	1226322.HMPREF1545_03533	185.0	0	N/A	N/A
Pfam	UHGV-1491540_7	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-1491540_7	APIS043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491540_7	PF13876	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_8	phrog_1129	63.6	2.4e-18	holin	lysis
UniRef90	UHGV-1491540_8	UniRef90_UPI001C1096AE	135.0	1.22e-39	phage holin family protein	N/A
eggNOG-mapper	UHGV-1491540_8	702450.CUW_2556	100.0	7.48e-27	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1491540_8	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1491540_8	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491540_13	UniRef90_F6DLP9	55.1	0.0000000458	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1491540_13	1450694.BTS2_3918	52.0	0.00000123	Right handed beta helix region	N/A
COG	UHGV-1491540_13	COG5434	N/A	N/A	Polygalacturonase	N/A
PHROG	UHGV-1491540_14	phrog_15239	57.7	8.1e-17	N/A	unknown function
PHROG	UHGV-1491540_15	phrog_1357	266.2	0	major head protein	head and packaging
UniRef90	UHGV-1491540_15	UniRef90_A0A8D9UH64	435.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1491540_15	1449126.JQKL01000003_gene1695	410.0	0	N/A	N/A
Pfam	UHGV-1491540_15	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1491540_15	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1491540_15	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_16	phrog_13908	317.6	0	N/A	unknown function
UniRef90	UHGV-1491540_16	UniRef90_UPI0012DFC3C8	118.0	2.32e-26	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1491540_16	1321782.HMPREF1986_00346	100.0	1.63e-21	N/A	N/A
KOfam	UHGV-1491540_17	K07584	66.2	5.5e-19	N/A	N/A
PHROG	UHGV-1491540_17	phrog_4478	57.5	2e-16	peptidase	other
UniRef90	UHGV-1491540_17	UniRef90_UPI001AEB1E59	51.6	0.00000278	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1491540_17	926561.KB900617_gene1817	53.9	0.0000000619	Cysteine protease Prp	N/A
Pfam	UHGV-1491540_17	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1491540_17	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_18	phrog_156	337.1	0	portal protein	head and packaging
UniRef90	UHGV-1491540_18	UniRef90_A0A8D9UH10	648.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1491540_18	748224.HMPREF9436_01396	528.0	0	N/A	N/A
structural_annotation	UHGV-1491540_18	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1491540_19	K06909	141.0	1.10002e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1491540_19	phrog_979	163.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1491540_19	UniRef90_R5AXD9	686.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1491540_19	1410650.JHWL01000003_gene2834	561.0	0	N/A	N/A
Pfam	UHGV-1491540_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1491540_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1491540_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491540_20	UniRef90_A0A2V2FFJ8	84.7	2.65e-19	N/A	N/A
Pfam	UHGV-1491540_20	PF18932	N/A	N/A	N/A	DUF5681
PHROG	UHGV-1491540_23	phrog_2245	78.3	9.2e-23	nucleoside triphosphate pyrophosphohydrolase	other
structural_annotation	UHGV-1491540_23	NF001994	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1491540_24	97139.C824_00134	52.8	0.000000454	N/A	N/A
PHROG	UHGV-1491540_25	phrog_38832	45.4	0.00000000000024	N/A	unknown function
eggNOG-mapper	UHGV-1491540_25	246199.CUS_4371	54.7	0.000000892	N/A	N/A
KOfam	UHGV-1491540_27	K00558	240.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1491540_27	phrog_116	276.4	0	DNA methyltransferase	other
UniRef90	UHGV-1491540_27	UniRef90_A0A3R6MA14	575.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1491540_27	272563.CD630_09270	414.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1491540_27	MTase_II_00058	214.6	0	Type II methyltransferase	RM
Pfam	UHGV-1491540_27	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1491540_27	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1491540_27	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1491540_27	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1491540_29	K03111	132.4	5e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1491540_29	phrog_44	130.5	1.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491540_29	UniRef90_A0A2V2C1N3	228.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1491540_29	97138.C820_02339	187.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1491540_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1491540_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1491540_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1491540_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1491540_29	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1491540_30	K02315	142.2	4.60046e-42	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1491540_30	phrog_50	129.6	2.7e-38	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491540_30	UniRef90_A0A396NX04	248.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1491540_30	445972.ANACOL_01829	236.0	0	N/A	N/A
Pfam	UHGV-1491540_30	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1491540_30	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1491540_30	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_31	phrog_2514	97.6	1.5e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1491540_31	397291.C804_01603	125.0	5.68e-32	DnaD domain protein	N/A
COG	UHGV-1491540_31	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1491540_31	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-1491540_32	K01160	60.3	5.6e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1491540_32	phrog_140	135.4	2.9e-40	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491540_32	UniRef90_A0A136WJ13	164.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1491540_32	1123263.AUKY01000072_gene2102	111.0	1.2e-29	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1491540_32	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1491540_32	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1491540_32	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_33	phrog_7566	100.0	1.1e-29	N/A	unknown function
UniRef90	UHGV-1491540_33	UniRef90_A0A7X5CEC2	89.0	4.9e-21	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1491540_33	508419.F8J187_9CAUD	81.6	5.79e-19	N/A	N/A
PHROG	UHGV-1491540_34	phrog_72	53.2	0.0000000000000045	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491540_34	UniRef90_UPI001F3F3E5C	114.0	8.78e-29	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1491540_34	445972.ANACOL_01825	112.0	1.3e-28	N/A	N/A
structural_annotation	UHGV-1491540_34	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1491540_35	phrog_14970	201.6	0	N/A	unknown function
UniRef90	UHGV-1491540_35	UniRef90_UPI00164BFA28	169.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1491540_35	1122981.AUME01000026_gene555	150.0	5.9401e-42	double-strand break repair protein	N/A
COG	UHGV-1491540_35	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1491540_35	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491540_40	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1491540_44	K01005	63.5	5.5e-18	tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]	N/A
eggNOG-mapper	UHGV-1491540_44	97138.C820_01489	53.5	0.00000614	cell envelope-related function transcriptional attenuator	N/A
Pfam	UHGV-1491540_44	PF03816	N/A	N/A	LytR_cpsA_psr family	LytR_cpsA_psr
COG	UHGV-1491540_44	COG1316	N/A	N/A	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	N/A