UHGV-1491729 (vOTU-027722)

Viral Genome: UHGV-1491729

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1491729
vOTU ID	vOTU-027722
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0259138
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.68 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.3
Jumbo phage	No

Genome content
Genome length (bp)	38,292
GC content	40.06%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	68
CDS density	92%
Average CDS length (bps)	517.19
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1491729_1	phrog_1535	333.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1491729_1	UniRef90_A0A173R880	687.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1491729_1	476272.RUMHYD_01785	682.0	0	phage tail tape measure protein	N/A
COG	UHGV-1491729_1	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491729_1	PF20155,MF_04138,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_2	phrog_706	134.9	5.4e-40	N/A	unknown function
UniRef90	UHGV-1491729_2	UniRef90_UPI001BAD00AD	211.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1491729_2	411459.RUMOBE_01383	343.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1491729_2	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1491729_2	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_3	phrog_11299	67.8	1.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1491729_3	33035.JPJF01000106_gene3125	55.8	0.0000000659	N/A	N/A
structural_annotation	UHGV-1491729_3	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_4	phrog_3099	133.4	1.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-1491729_4	411902.CLOBOL_00129	169.0	0	N/A	N/A
structural_annotation	UHGV-1491729_4	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_5	phrog_3266	89.3	3.4e-26	tail completion	connector
eggNOG-mapper	UHGV-1491729_5	476272.RUMHYD_01781	149.0	8.96831e-44	N/A	N/A
structural_annotation	UHGV-1491729_5	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_6	phrog_3366	98.7	5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1491729_6	476272.RUMHYD_01779	158.0	0	N/A	N/A
structural_annotation	UHGV-1491729_6	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_7	phrog_18218	131.5	2.4e-39	N/A	unknown function
UniRef90	UHGV-1491729_7	UniRef90_A0A8D9PGR5	142.0	7.19987e-42	Holin	N/A
eggNOG-mapper	UHGV-1491729_7	411902.CLOBOL_03424	82.4	6.76e-19	N/A	N/A
structural_annotation	UHGV-1491729_7	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_8	phrog_774	67.5	2.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1491729_8	397290.C810_05225	140.0	2.10055e-42	N/A	N/A
PHROG	UHGV-1491729_10	phrog_541	93.8	1.1e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-1491729_10	476272.RUMHYD_01778	112.0	1.77e-29	N/A	N/A
PHROG	UHGV-1491729_11	phrog_544	168.2	0	major head protein	head and packaging
UniRef90	UHGV-1491729_11	UniRef90_A0A395X7A1	731.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1491729_11	1232453.BAIF02000011_gene3359	391.0	0	N/A	N/A
Pfam	UHGV-1491729_11	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1491729_11	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_12	phrog_194	65.5	1e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-1491729_12	UniRef90_UPI001D14C9C8	182.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1491729_12	476272.RUMHYD_01775	197.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1491729_12	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1491729_12	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_13	phrog_28802	192.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1491729_13	476272.RUMHYD_01772	159.0	0	N/A	N/A
PHROG	UHGV-1491729_14	phrog_20016	205.7	0	N/A	unknown function
UniRef90	UHGV-1491729_14	UniRef90_A0A285PT46	166.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1491729_14	397290.C810_05214	183.0	0	N/A	N/A
structural_annotation	UHGV-1491729_14	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_15	phrog_16490	190.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1491729_15	397290.C810_01328	189.0	0	N/A	N/A
PHROG	UHGV-1491729_16	phrog_22984	96.9	1.1e-28	N/A	unknown function
PHROG	UHGV-1491729_17	phrog_21718	133.2	1.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-1491729_17	397290.C810_05210	122.0	2.53e-33	N/A	N/A
UniRef90	UHGV-1491729_19	UniRef90_A0A1C5PJW7	93.6	3.91e-24	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-1491729_19	1410625.JHWK01000002_gene45	72.4	2.19e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1491729_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1491729_19	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1491729_19	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491729_20	UniRef90_A0A395X7A4	168.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1491729_20	476272.RUMHYD_01766	122.0	7.54e-35	N/A	N/A
PHROG	UHGV-1491729_21	phrog_3754	114.1	8.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-1491729_21	476272.RUMHYD_01764	182.0	0	N/A	N/A
PHROG	UHGV-1491729_22	phrog_581	233.2	0	minor head protein	head and packaging
UniRef90	UHGV-1491729_22	UniRef90_UPI001C0EDE82	604.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1491729_22	476272.RUMHYD_01761	169.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1491729_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1491729_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491729_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_23	phrog_556	95.2	4.2e-28	minor head protein	head and packaging
UniRef90	UHGV-1491729_23	UniRef90_UPI001C0ECC47	256.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1491729_23	1449343.JQLQ01000002_gene1329	57.4	0.0000000103	Minor capsid protein	N/A
Pfam	UHGV-1491729_23	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1491729_23	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_24	phrog_533	282.8	0	portal protein	head and packaging
UniRef90	UHGV-1491729_24	UniRef90_A0A1C6CDM8	676.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1491729_24	33035.JPJF01000106_gene3135	501.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1491729_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1491729_25	K06909	330.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1491729_25	phrog_3717	155.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1491729_25	UniRef90_A0A395X9V4	786.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1491729_25	33035.JPJF01000106_gene3136	414.0	0	Terminase small subunit	N/A
Pfam	UHGV-1491729_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1491729_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-1491729_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1491729_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_26	phrog_606	92.4	5.2e-27	terminase small subunit	head and packaging
UniRef90	UHGV-1491729_26	UniRef90_UPI00195648BB	173.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1491729_26	397290.C810_05185	174.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-1491729_26	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1491729_26	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1491729_27	411459.RUMOBE_01385	50.1	0.00000148	N/A	N/A
AcrCatalog	UHGV-1491729_27	cluster_11670	78.2	6.1e-22	NA	N/A
PHROG	UHGV-1491729_28	phrog_10714	42.6	0.00000000001	N/A	unknown function
eggNOG-mapper	UHGV-1491729_28	537007.BLAHAN_05460	48.5	0.00000422	N/A	N/A
eggNOG-mapper	UHGV-1491729_31	1235799.C818_02666	68.2	0.0000000000251	N/A	N/A
structural_annotation	UHGV-1491729_31	PF11302	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_34	phrog_20593	87.0	1.5e-25	N/A	unknown function
structural_annotation	UHGV-1491729_34	PF07870,TIGR02501	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491729_35	UniRef90_A0A395XB56	100.0	7.38e-25	N/A	N/A
PHROG	UHGV-1491729_37	phrog_4601	41.0	0.000000000031	N/A	unknown function
PHROG	UHGV-1491729_39	phrog_954	222.7	0	DNA methyltransferase	other
UniRef90	UHGV-1491729_39	UniRef90_UPI00156F6AA5	273.0	0	methyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-1491729_39	1145276.T479_16310	217.0	0	methyltransferase	N/A
PADLOC	UHGV-1491729_39	MTase_II_00074	205.5	0	Type II methyltransferase	RM
COG	UHGV-1491729_39	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-1491729_40	411459.RUMOBE_01111	70.9	0.000000000000118	N/A	N/A
KOfam	UHGV-1491729_41	K00390	86.4	2.4e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1491729_41	phrog_424	123.9	1.1e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1491729_41	UniRef90_A0A412EKX4	590.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-1491729_41	1232452.BAIB02000007_gene1640	407.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1491729_41	BrxP_00001	69.1	4e-21	BrxP	BREX
Pfam	UHGV-1491729_41	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1491729_41	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1491729_41	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491729_42	UniRef90_A0A373P4I4	66.2	0.00000000000185	Winged helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1491729_42	PF01726,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_43	phrog_17690	78.2	8.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-1491729_43	476272.RUMHYD_03925	114.0	8.46e-32	N/A	N/A
KOfam	UHGV-1491729_45	K15255	243.2	0	PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]	N/A
PHROG	UHGV-1491729_45	phrog_325	263.4	0	Dda-like helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491729_45	UniRef90_A0A2V2D011	884.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1491729_45	1121333.JMLH01000003_gene334	278.0	0	PIF1-like helicase	N/A
PADLOC	UHGV-1491729_45	cluster10	54.8	2.1e-18	RecD_0_IVD	CRISPR-CAS
Pfam	UHGV-1491729_45	PF05970	N/A	N/A	PIF1-like helicase	PIF1
COG	UHGV-1491729_45	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1491729_45	PF05970,PF16277,MF_03176,TIGR01448,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_46	phrog_8841	489.5	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491729_46	UniRef90_A0A3A6GQS5	1217.0	0	N/A	N/A
eggNOG-mapper	UHGV-1491729_46	411460.RUMTOR_02070	526.0	0	N/A	N/A
Pfam	UHGV-1491729_46	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1491729_46	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1491729_46	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491729_46	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-1491729_47	K02316	77.3	2.3e-22	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1491729_47	phrog_11992	126.7	2e-37	N/A	unknown function
UniRef90	UHGV-1491729_47	UniRef90_A0A3A6GSV7	318.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1491729_47	411460.RUMTOR_02069	126.0	7.39e-35	CHC2 zinc finger	N/A
PADLOC	UHGV-1491729_47	drt-UG29	44.9	0.00000000000087	DRT	DRT
Pfam	UHGV-1491729_47	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1491729_47	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1491729_47	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_48	phrog_3490	151.1	4.2039e-45	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491729_48	UniRef90_R9KEE1	257.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1491729_48	1256908.HMPREF0373_00660	258.0	0	N/A	N/A
Pfam	UHGV-1491729_48	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1491729_48	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_49	phrog_28936	154.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1491729_49	573061.Clocel_3563	106.0	9.09e-27	N/A	N/A
PHROG	UHGV-1491729_50	phrog_28936	60.2	3.8e-17	N/A	unknown function
PHROG	UHGV-1491729_51	phrog_18107	247.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1491729_51	397290.C810_05167	231.0	0	N/A	N/A
structural_annotation	UHGV-1491729_51	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_52	phrog_2872	244.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491729_52	UniRef90_UPI0015715A02	389.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1491729_52	397290.C810_05165	340.0	0	AAA domain	N/A
Pfam	UHGV-1491729_52	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1491729_52	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491729_53	UniRef90_R6RDX0	83.2	1.11e-19	Arginyl-tRNA synthetase	N/A
structural_annotation	UHGV-1491729_54	NF011879	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_60	phrog_7964	260.0	0	N/A	unknown function
UniRef90	UHGV-1491729_60	UniRef90_A0A285PUH1	135.0	1.74e-35	Trimeric LpxA-like	N/A
eggNOG-mapper	UHGV-1491729_60	665950.HMPREF1025_02555	112.0	1.2e-27	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-1491729_60	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-1491729_60	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
structural_annotation	UHGV-1491729_60	NF040481	N/A	N/A	N/A	N/A
KOfam	UHGV-1491729_64	K18830	54.3	0.0000000000000025	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1491729_64	phrog_2967	46.5	0.00000000000064	transcriptional regulator	transcription regulation
UniRef90	UHGV-1491729_64	UniRef90_R9KL24	98.6	2.47e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1491729_64	397290.C810_01441	98.6	4.14e-25	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1491729_64	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1491729_64	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1491729_64	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1491729_67	phrog_215	51.8	0.00000000000001	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-1491729_67	180332.JTGN01000005_gene2952	105.0	5.53e-21	domain, Protein	N/A
Pfam	UHGV-1491729_67	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1491729_67	COG2382	N/A	N/A	Enterochelin esterase or related enzyme	N/A
KOfam	UHGV-1491729_68	K06400	271.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1491729_68	phrog_95	282.8	0	integrase	integration and excision
UniRef90	UHGV-1491729_68	UniRef90_A0A2V2D7K6	773.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1491729_68	33035.JPJF01000109_gene439	560.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1491729_68	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1491729_68	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1491729_68	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1491729_68	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A