UHGV-1497895 (vOTU-013624)

Viral Genome: UHGV-1497895

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1497895
vOTU ID	vOTU-013624
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0295461
Associated BioSample	SAMN02334094
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.71 (High-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9802
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.32
Jumbo phage	No

Genome content
Genome length (bp)	45,495
GC content	45.04%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	91%
Average CDS length (bps)	656.71
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1497895_2	phrog_6058	77.5	9.6e-23	N/A	unknown function
UniRef90	UHGV-1497895_2	UniRef90_A0A0U9H7T0	58.9	0.000000000566	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-1497895_2	1280689.AUJC01000011_gene1497	68.2	0.000000000000024	N/A	N/A
structural_annotation	UHGV-1497895_2	PF12728,TIGR01764	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1497895_3	NF041909	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_4	phrog_14367	54.2	9.5e-16	N/A	unknown function
UniRef90	UHGV-1497895_4	UniRef90_R6WTN1	172.0	0	Peptidoglycan-binding LysM	N/A
eggNOG-mapper	UHGV-1497895_4	397291.C804_02419	50.1	0.00000312	LysM domain	N/A
Pfam	UHGV-1497895_4	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1497895_4	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1497895_4	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_6	phrog_434	327.5	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497895_6	UniRef90_R6WGP6	617.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1497895_6	706434.HMPREF9429_00551	356.0	0	YqaJ viral recombinase family protein	N/A
Pfam	UHGV-1497895_6	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1497895_6	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1497895_6	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1497895_6	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1497895_7	UniRef90_R6WLK2	125.0	4.8e-36	Conserved domain protein	N/A
Pfam	UHGV-1497895_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1497895_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1497895_7	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1497895_8	K07455	204.9	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1497895_8	phrog_148	212.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497895_8	UniRef90_R6XVK6	353.0	0	Putative phage RecT family protein	N/A
eggNOG-mapper	UHGV-1497895_8	525257.HMPREF0204_11404	204.0	0	RecT family	N/A
Pfam	UHGV-1497895_8	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1497895_8	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1497895_8	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1497895_8	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_10	phrog_5968	150.5	7.00649e-45	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497895_10	UniRef90_R6WTP4	190.0	0	N-terminal phage replisome organizer	N/A
eggNOG-mapper	UHGV-1497895_10	1033737.CAEV01000029_gene310	124.0	3.89e-31	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-1497895_10	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1497895_10	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1497895_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1497895_10	PF09681,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_17	phrog_1454	54.8	0.0000000000000015	N/A	unknown function
KOfam	UHGV-1497895_23	K01160	60.9	3.4e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1497895_23	phrog_140	132.1	2.9e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497895_23	UniRef90_A0A316S9J1	146.0	1.5106e-42	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1497895_23	743719.PaelaDRAFT_5642	125.0	3.12e-35	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1497895_23	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1497895_23	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1497895_23	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1497895_24	K03111	55.4	0.0000000000000017	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1497895_24	phrog_44	60.0	6.6e-17	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497895_24	UniRef90_A0A1Q6RQK6	271.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1497895_24	904314.SEVCU012_1220	50.1	0.00000725	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1497895_24	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1497895_24	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1497895_24	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1497895_24	PF00436,MF_00984,TIGR00621,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_27	phrog_15863	283.1	0	N/A	unknown function
UniRef90	UHGV-1497895_27	UniRef90_R6WLL6	592.0	0	Cytochrome c domain-containing protein	N/A
eggNOG-mapper	UHGV-1497895_27	693746.OBV_01780	127.0	2.79e-33	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-1497895_27	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-1497895_29	PF13983	N/A	N/A	N/A	N/A
UniRef90	UHGV-1497895_30	UniRef90_UPI00103300F2	59.7	0.000000000601	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1497895_30	1408437.JNJN01000040_gene204	50.8	0.000000436	N/A	N/A
structural_annotation	UHGV-1497895_30	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1497895_32	K06909	88.4	1e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1497895_32	phrog_2	159.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1497895_32	UniRef90_UPI001D00EC11	397.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1497895_32	585503.HMPREF7545_1731	414.0	0	Terminase-like family	N/A
Pfam	UHGV-1497895_32	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1497895_32	COG5323	N/A	N/A	Phage large terminase packaging protein	N/A
structural_annotation	UHGV-1497895_32	PF03237,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_34	phrog_332	436.0	0	head-tail adaptor	connector
UniRef90	UHGV-1497895_34	UniRef90_UPI001F3F9DD9	542.0	0	portal protein	N/A
eggNOG-mapper	UHGV-1497895_34	568816.Acin_1834	601.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1497895_34	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1497895_34	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_35	phrog_528	105.7	1.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-1497895_35	1401067.HMPREF0872_06805	94.0	3.39e-23	N/A	N/A
PHROG	UHGV-1497895_36	phrog_458	151.5	5.60519e-45	protease	other
eggNOG-mapper	UHGV-1497895_36	568816.Acin_1832	97.1	5.12e-22	N/A	N/A
PHROG	UHGV-1497895_37	phrog_212	204.6	0	major head protein	head and packaging
UniRef90	UHGV-1497895_37	UniRef90_A0A6J5KPX9	216.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1497895_37	568816.Acin_1831	352.0	0	N/A	N/A
Pfam	UHGV-1497895_37	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1497895_37	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_38	phrog_427	65.3	8.9e-19	N/A	unknown function
structural_annotation	UHGV-1497895_38	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_39	phrog_394	155.8	0	tail protein	tail
UniRef90	UHGV-1497895_39	UniRef90_A0A0U1KW64	124.0	1.83e-32	N/A	N/A
eggNOG-mapper	UHGV-1497895_39	1123288.SOV_1c10710	124.0	3.07e-33	N/A	N/A
structural_annotation	UHGV-1497895_39	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_40	phrog_376	606.5	0	tail protein	tail
UniRef90	UHGV-1497895_40	UniRef90_A0A0U1KV93	352.0	0	N/A	N/A
eggNOG-mapper	UHGV-1497895_40	568816.Acin_1828	657.0	0	N/A	N/A
structural_annotation	UHGV-1497895_40	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_41	phrog_308	107.4	1e-31	internal virion protein	head and packaging
structural_annotation	UHGV-1497895_41	PF13420,MF_02210,NF011709,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_42	phrog_418	131.1	2.2e-39	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1497895_42	568816.Acin_1826	103.0	1.5e-24	N/A	N/A
structural_annotation	UHGV-1497895_42	PF16789,TIGR02971,COG3524	N/A	N/A	N/A	N/A
UniRef90	UHGV-1497895_43	UniRef90_A0A1Q6RQM5	1032.0	0	SLT domain-containing protein	N/A
COG	UHGV-1497895_43	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1497895_43	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_44	phrog_9880	532.7	0	N/A	unknown function
UniRef90	UHGV-1497895_44	UniRef90_A0A1Q6RQR6	4437.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1497895_44	1123288.SOV_1c10750	187.0	2.10195e-44	N/A	N/A
Pfam	UHGV-1497895_44	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
PHROG	UHGV-1497895_45	phrog_1640	53.4	0.0000000000000045	tail protein	tail
eggNOG-mapper	UHGV-1497895_45	1115515.EV102420_06_00490	68.2	0.00000000541	N/A	N/A
structural_annotation	UHGV-1497895_45	PF03906	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_47	phrog_1141	59.5	5.1e-17	tail fiber protein	tail
UniRef90	UHGV-1497895_47	UniRef90_A0A3C1IQ26	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-1497895_47	1286631.X805_38770	56.2	0.000000254	N/A	N/A
Pfam	UHGV-1497895_47	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-1497895_47	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_48	phrog_4105	80.2	1.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-1497895_48	33035.JPJF01000043_gene996	75.5	4.93e-16	N/A	N/A
PHROG	UHGV-1497895_50	phrog_918	101.7	3.2e-30	N/A	unknown function
UniRef90	UHGV-1497895_50	UniRef90_UPI000EC62F11	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-1497895_50	537007.BLAHAN_05515	142.0	3.82554e-43	N/A	N/A
Pfam	UHGV-1497895_50	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1497895_50	PF19791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1497895_51	1392502.JNIO01000008_gene1280	231.0	0	N/A	N/A
structural_annotation	UHGV-1497895_51	PF21277	N/A	N/A	N/A	N/A
UniRef90	UHGV-1497895_54	UniRef90_A0A316S6W0	99.0	1.46e-25	HTH luxR-type domain-containing protein	N/A
Pfam	UHGV-1497895_54	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1497895_54	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-1497895_54	PF08281,MF_00674,NF001073,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1497895_55	phrog_21718	45.8	0.000000000001	N/A	unknown function
eggNOG-mapper	UHGV-1497895_56	476272.RUMHYD_01953	49.7	0.00000062	N/A	N/A
PHROG	UHGV-1497895_57	phrog_16490	88.9	2.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1497895_57	445972.ANACOL_01880	84.0	1.26e-16	N/A	N/A
structural_annotation	UHGV-1497895_58	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1497895_59	1378168.N510_03079	57.0	0.000000137	N/A	N/A
KOfam	UHGV-1497895_60	K14059	127.0	2.3e-37	int; integrase	N/A
PHROG	UHGV-1497895_60	phrog_1	141.0	9.90017e-42	integrase	integration and excision
UniRef90	UHGV-1497895_60	UniRef90_R6X1Y3	684.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1497895_60	1123250.KB908381_gene1631	329.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1497895_60	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1497895_60	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1497895_60	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1497895_63	K18830	62.0	1.3e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1497895_63	phrog_8	48.4	0.00000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-1497895_63	UniRef90_R6X1Y8	218.0	0	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1497895_63	1151292.QEW_0725	93.6	4.92e-23	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1497895_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1497895_63	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1497895_63	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A