UHGV-1501527 (vOTU-108991)

Viral Genome: UHGV-1501527

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1501527
vOTU ID	vOTU-108991
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0230375
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.96 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9724
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.83
Jumbo phage	No

Genome content
Genome length (bp)	33,387
GC content	43.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	94%
Average CDS length (bps)	603.17
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1501527_3	phrog_64	129.0	2.8e-38	portal protein	head and packaging
UniRef90	UHGV-1501527_3	UniRef90_UPI0008331C88	448.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1501527_3	1121342.AUCO01000012_gene1700	148.0	3.24e-36	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1501527_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1501527_3	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_4	phrog_1657	197.6	0	head morphogenesis	head and packaging
UniRef90	UHGV-1501527_4	UniRef90_A0A1G9U003	223.0	0	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-1501527_4	1582149.A0A0A8WEF5_9CAUD	221.0	0	Phage Mu protein F like protein	N/A
NCBIFam	UHGV-1501527_4	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
PHROG	UHGV-1501527_6	phrog_2303	131.5	5.5e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-1501527_6	UniRef90_A0A0Z8CP22	72.4	0.00000000000535	N/A	N/A
eggNOG-mapper	UHGV-1501527_6	764299.STRIC_2530	79.3	0.00000000000000247	N/A	N/A
structural_annotation	UHGV-1501527_6	PF10788,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_7	phrog_909	60.6	2.2e-17	major head protein	head and packaging
eggNOG-mapper	UHGV-1501527_7	1158607.UAU_01759	50.1	0.0000052	N/A	N/A
structural_annotation	UHGV-1501527_7	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_8	phrog_29	256.2	0	major head protein	head and packaging
UniRef90	UHGV-1501527_8	UniRef90_A0A843JL33	405.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1501527_8	1296659.S5MNB6_9CAUD	338.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1501527_8	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1501527_8	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_9	phrog_3281	40.6	0.000000000042	endonuclease VII	DNA, RNA and nucleotide metabolism
PHROG	UHGV-1501527_10	phrog_4020	44.7	0.000000000002	N/A	unknown function
structural_annotation	UHGV-1501527_11	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1501527_12	59241.E7DNB1_BPDP1	73.2	0.00000000000000408	N/A	N/A
structural_annotation	UHGV-1501527_12	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_13	phrog_7585	82.5	5.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-1501527_13	748727.CLJU_c31260	84.7	2.49e-19	N/A	N/A
structural_annotation	UHGV-1501527_13	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_14	phrog_6686	111.4	4.4e-33	tail tube protein	tail
UniRef90	UHGV-1501527_14	UniRef90_A0A1C6KI12	153.0	1.22053e-42	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1501527_14	697281.Mahau_0063	59.7	0.0000000231	N/A	N/A
structural_annotation	UHGV-1501527_14	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_15	phrog_6280	132.3	2.2e-39	N/A	unknown function
UniRef90	UHGV-1501527_15	UniRef90_UPI001E3BEC7F	117.0	8.43e-31	esterase	N/A
eggNOG-mapper	UHGV-1501527_15	445335.CBN_3078	108.0	2.85e-28	N/A	N/A
PHROG	UHGV-1501527_16	phrog_1533	364.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1501527_16	UniRef90_A0A374E9U4	355.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1501527_16	411460.RUMTOR_00482	347.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1501527_16	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1501527_16	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1501527_16	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1501527_16	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_17	phrog_36410	127.6	3.5e-38	N/A	unknown function
UniRef90	UHGV-1501527_17	UniRef90_A0A7X9C3E1	266.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1501527_17	931626.Awo_c30940	137.0	1.17e-35	Phage tail protein	N/A
Pfam	UHGV-1501527_17	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1501527_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1501527_17	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_18	phrog_538	244.5	0	minor tail protein	tail
UniRef90	UHGV-1501527_18	UniRef90_UPI00136AC3EA	218.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1501527_18	768704.Desmer_4453	226.0	0	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1501527_18	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1501527_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_19	phrog_1220	255.8	0	head protein	head and packaging
UniRef90	UHGV-1501527_19	UniRef90_UPI000C7676C6	194.0	0	methyl-accepting chemotaxis protein	N/A
eggNOG-mapper	UHGV-1501527_19	1033737.CAEV01000028_gene283	213.0	0	N/A	N/A
structural_annotation	UHGV-1501527_19	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_20	phrog_297	40.9	0.000000000024	holin	lysis
UniRef90	UHGV-1501527_20	UniRef90_A0A417HS25	113.0	5.79e-31	Phage holin	N/A
eggNOG-mapper	UHGV-1501527_20	1408437.JNJN01000039_gene392	93.2	6.29e-24	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1501527_20	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1501527_20	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1501527_20	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501527_20	COG5546	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1501527_26	476272.RUMHYD_01770	92.0	3.95e-20	N/A	N/A
PHROG	UHGV-1501527_27	phrog_20016	59.8	3.6e-17	N/A	unknown function
UniRef90	UHGV-1501527_27	UniRef90_A0A395WF88	76.6	0.00000000000000285	BclA_C domain-containing protein	N/A
Pfam	UHGV-1501527_27	PF18573	N/A	N/A	BclA C-terminal domain	BclA_C
structural_annotation	UHGV-1501527_27	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501527_29	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
KOfam	UHGV-1501527_32	K14440	77.5	1.3e-32	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1501527_32	phrog_62	264.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501527_32	UniRef90_A0A1V5E5D6	278.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1501527_32	887325.HMPREF0381_0366	198.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-1501527_32	ZorD1_00007	56.2	4.3e-16	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1501527_32	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1501527_32	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1501527_32	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1501527_32	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_33	phrog_1315	49.3	0.000000000000072	N/A	unknown function
eggNOG-mapper	UHGV-1501527_33	1178540.BA70_19260	50.4	0.00000119	N/A	N/A
COG	UHGV-1501527_34	COG1591	N/A	N/A	Holliday junction resolvase Hjc, archaeal type	N/A
PHROG	UHGV-1501527_35	phrog_24386	112.7	3.1e-33	N/A	unknown function
eggNOG-mapper	UHGV-1501527_35	1280694.AUJQ01000013_gene1409	118.0	1.57e-32	phosphatase activity	N/A
COG	UHGV-1501527_35	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
KOfam	UHGV-1501527_37	K00560	153.0	1.4013e-45	thyA, TYMS; thymidylate synthase [EC:2.1.1.45]	N/A
PHROG	UHGV-1501527_37	phrog_5131	178.7	0	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501527_37	UniRef90_A0A4Y5FGW2	177.0	0	Thymidylate synthase	N/A
eggNOG-mapper	UHGV-1501527_37	1408254.T458_24480	149.0	1.73e-40	Thymidylate synthase	N/A
Pfam	UHGV-1501527_37	PF00303	N/A	N/A	Thymidylate synthase	Thymidylat_synt
COG	UHGV-1501527_37	COG0207	N/A	N/A	Thymidylate synthase	N/A
PHROG	UHGV-1501527_38	phrog_761	59.2	1.7e-17	thymidylate kinase	other
UniRef90	UHGV-1501527_38	UniRef90_A0A2A5INL2	63.9	0.000000000561	dNK domain-containing protein	N/A
PADLOC	UHGV-1501527_38	VakA	42.5	0.000000000016	N/A	Viperin
Pfam	UHGV-1501527_38	PF02223	N/A	N/A	Thymidylate kinase	Thymidylate_kin
Pfam	UHGV-1501527_38	PF01202	N/A	N/A	Shikimate kinase	SKI
structural_annotation	UHGV-1501527_38	PF03976,MF_00165,TIGR00041,COG1428	N/A	N/A	N/A	N/A
UniRef90	UHGV-1501527_40	UniRef90_A0A6M3L1E8	239.0	0	Putative iron-sulfur cluster-binding domain contining protein	N/A
eggNOG-mapper	UHGV-1501527_40	397291.C804_01174	101.0	2.43e-21	Iron-sulfur cluster-binding domain	N/A
Pfam	UHGV-1501527_40	PF04055	N/A	N/A	Radical SAM superfamily	Radical_SAM
Pfam	UHGV-1501527_40	PF13186	N/A	N/A	Iron-sulfur cluster-binding domain	SPASM
COG	UHGV-1501527_40	COG0535	N/A	N/A	Radical SAM superfamily maturase, SkfB/NifB/PqqE family	N/A
structural_annotation	UHGV-1501527_40	PF04055,MF_00660,TIGR04321,COG0641	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_41	phrog_4519	80.8	1.4e-23	glycosyltransferase	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-1501527_41	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-1501527_41	PF20691,MF_01072,TIGR03965,COG1216	N/A	N/A	N/A	N/A
KOfam	UHGV-1501527_42	K11294	41.7	0.000000000012	NCL, NSR1; nucleolin	N/A
PHROG	UHGV-1501527_42	phrog_3724	73.8	1.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-1501527_42	1403819.BATR01000122_gene4276	56.2	0.000000317	N/A	N/A
Pfam	UHGV-1501527_42	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1501527_42	PF05037,MF_00292,NF003080,COG2053	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_43	phrog_124	83.6	2.5e-24	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501527_43	UniRef90_A0A1L6BY46	102.0	2.17e-22	Nucleotide-binding protein	N/A
Pfam	UHGV-1501527_43	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1501527_43	PF13479,MF_00350,TIGR01618,COG2874	N/A	N/A	N/A	N/A
KOfam	UHGV-1501527_44	K16899	55.9	4.8e-16	addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]	N/A
PHROG	UHGV-1501527_44	phrog_1218	119.1	3.2e-35	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501527_44	UniRef90_A0A482MIW4	78.6	0.000000000000878	PD-(D/E)XK nuclease	N/A
Pfam	UHGV-1501527_44	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-1501527_44	PF12705,TIGR00372,COG2887	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501527_45	PF18339,NF037951,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-1501527_47	K02335	367.7	0	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-1501527_47	phrog_17	333.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501527_47	UniRef90_A0A249XYV4	338.0	0	DNA polymerase I	N/A
eggNOG-mapper	UHGV-1501527_47	1340829.S5Y5D9_9CAUD	237.0	0	DNA polymerase family A	N/A
PADLOC	UHGV-1501527_47	drt-cluster58	102.8	4.9e-30	DRT	DRT
Pfam	UHGV-1501527_47	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-1501527_47	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
structural_annotation	UHGV-1501527_47	PF00476,PF01612,MF_04101,NF011539,COG0749	N/A	N/A	N/A	N/A
KOfam	UHGV-1501527_51	K03698	47.1	0.00000000000035	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-1501527_51	phrog_5889	83.4	2.2e-24	N/A	unknown function
UniRef90	UHGV-1501527_51	UniRef90_A0A1C5UD48	184.0	0	Predicted HD-superfamily hydrolase	N/A
eggNOG-mapper	UHGV-1501527_51	1219626.HMPREF1639_07345	166.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
Pfam	UHGV-1501527_51	PF01966	N/A	N/A	HD domain	HD
COG	UHGV-1501527_51	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-1501527_51	PF01966,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-1501527_52	phrog_864	206.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501527_52	UniRef90_A0A1I0CM00	209.0	0	Phage/plasmid primase, P4 family, C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1501527_52	478749.BRYFOR_09102	194.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1501527_52	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1501527_52	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1501527_52	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1501527_52	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1501527_52	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1501527_52	PF05272,PF02257,MF_01625,TIGR01613,COG3378	N/A	N/A	N/A	N/A