UHGV-1502577 (vOTU-154148)

Viral Genome: UHGV-1502577

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1502577
vOTU ID	vOTU-154148
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0240535
Associated BioSample	SAMEA3664795
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.51 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9801
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.4
Jumbo phage	No

Genome content
Genome length (bp)	35,302
GC content	50.10%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	94%
Average CDS length (bps)	601.58
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1502577_2	K07273	182.3	0	acm; lysozyme	N/A
PHROG	UHGV-1502577_2	phrog_291	159.2	0	endolysin	lysis
UniRef90	UHGV-1502577_2	UniRef90_A0A367G061	535.0	0	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1502577_2	411471.SUBVAR_06927	317.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1502577_2	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-1502577_2	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1502577_2	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1502577_2	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_4	phrog_32509	42.7	0.0000000000084	N/A	unknown function
UniRef90	UHGV-1502577_4	UniRef90_UPI0018835F0C	288.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1502577_4	476272.RUMHYD_00002	144.0	9.69e-33	N/A	N/A
structural_annotation	UHGV-1502577_4	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_6	phrog_18444	79.3	2.9e-23	N/A	unknown function
UniRef90	UHGV-1502577_6	UniRef90_A0A7X5CHF3	50.4	0.000000793	Peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-1502577_6	1294142.CINTURNW_1707	57.8	0.000000000171	N/A	N/A
PHROG	UHGV-1502577_7	phrog_1067	400.2	0	minor head protein	head and packaging
UniRef90	UHGV-1502577_7	UniRef90_UPI00195D4DA4	454.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1502577_7	1123263.AUKY01000068_gene489	398.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1502577_7	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1502577_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1502577_7	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1502577_7	PF14594,PF00629,PF03424,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_8	phrog_33	67.7	2.9e-19	distal tail protein Dit	tail
UniRef90	UHGV-1502577_8	UniRef90_A0A173Z1X4	134.0	3.73e-35	Phage-related protein	N/A
eggNOG-mapper	UHGV-1502577_8	1123263.AUKY01000068_gene490	105.0	5.35e-25	tail component	N/A
COG	UHGV-1502577_8	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1502577_8	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_9	phrog_6900	231.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1502577_9	UniRef90_UPI0018A9735A	214.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1502577_9	1437608.BBIA_2554	281.0	0	phage tail tape measure protein	N/A
COG	UHGV-1502577_9	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1502577_9	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_11	phrog_18646	41.9	0.000000000017	N/A	unknown function
PHROG	UHGV-1502577_12	phrog_885	72.4	4.8e-21	major tail protein	tail
UniRef90	UHGV-1502577_12	UniRef90_A0A843J9F0	183.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1502577_12	1504822.CCNO01000012_gene492	211.0	0	N/A	N/A
structural_annotation	UHGV-1502577_12	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1502577_13	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_14	phrog_17977	87.3	1.1e-25	N/A	unknown function
UniRef90	UHGV-1502577_14	UniRef90_A0A285PT57	92.0	1.03e-21	Phage head-tail joining protein	N/A
structural_annotation	UHGV-1502577_14	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_16	phrog_544	120.0	2.1e-35	major head protein	head and packaging
UniRef90	UHGV-1502577_16	UniRef90_A0A1C6B5R0	337.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1502577_16	476272.RUMHYD_01776	314.0	0	N/A	N/A
structural_annotation	UHGV-1502577_16	PF06673,PF13629,MF_04119,TIGR04387,NF005261,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1502577_17	UniRef90_A0A6B9SU02	73.9	0.00000000000107	Fibronectin autolysin	N/A
structural_annotation	UHGV-1502577_17	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_18	phrog_5	76.5	4.9e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-1502577_18	UniRef90_UPI001411BC8C	189.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1502577_18	1443125.Z962_05620	95.5	1.77e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1502577_18	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1502577_18	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1502577_18	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_20	phrog_2468	113.6	1.1e-34	head morphogenesis	head and packaging
UniRef90	UHGV-1502577_20	UniRef90_A0A3D3Y165	443.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1502577_20	1504822.CCNO01000013_gene286	254.0	0	cell adhesion	N/A
Pfam	UHGV-1502577_20	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1502577_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1502577_20	PF03496,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_21	phrog_64	173.5	0	portal protein	head and packaging
UniRef90	UHGV-1502577_21	UniRef90_UPI0018A8A301	618.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1502577_21	673376.F2VHW1_9CAUD	214.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1502577_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1502577_21	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1502577_22	K06909	397.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1502577_22	phrog_3717	157.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1502577_22	UniRef90_UPI001C3B9235	625.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1502577_22	411471.SUBVAR_06507	576.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1502577_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1502577_22	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1502577_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1502577_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1502577_22	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1502577_24	UniRef90_E2ZNR3	485.0	0	Radical SAM domain protein	N/A
eggNOG-mapper	UHGV-1502577_24	748224.HMPREF9436_03343	485.0	0	DNA photolyase activity	N/A
COG	UHGV-1502577_24	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-1502577_24	PF20903,MF_01864,NF033668,COG1180	N/A	N/A	N/A	N/A
KOfam	UHGV-1502577_25	K03497	42.3	0.000000000015	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1502577_25	phrog_620	153.3	1.4013e-45	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1502577_25	UniRef90_UPI00040357FA	167.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1502577_25	1280681.AUJZ01000037_gene2541	167.0	0	DNA binding	N/A
PADLOC	UHGV-1502577_25	MTase_II_00015	74.3	2.5e-21	Type II methyltransferase	RM
Pfam	UHGV-1502577_25	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1502577_25	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-1502577_26	phrog_36	64.6	1.9e-18	transcriptional regulator	transcription regulation
COG	UHGV-1502577_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1502577_26	PF04545,PF18323,MF_00674,NF009172,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_33	phrog_9958	115.4	3.5e-34	N/A	unknown function
UniRef90	UHGV-1502577_33	UniRef90_UPI001D08A241	154.0	2.66247e-44	N/A	N/A
eggNOG-mapper	UHGV-1502577_33	1160721.RBI_I01591	125.0	1.2e-33	N/A	N/A
structural_annotation	UHGV-1502577_33	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_37	phrog_824	136.4	9.99995e-41	N/A	unknown function
UniRef90	UHGV-1502577_37	UniRef90_A0A6N8GXS9	150.0	2.10195e-44	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1502577_37	665956.HMPREF1032_00132	135.0	4.22e-39	VRR_NUC	N/A
Pfam	UHGV-1502577_37	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-1502577_39	phrog_16304	71.2	1.6e-20	N/A	unknown function
UniRef90	UHGV-1502577_39	UniRef90_UPI001E560709	72.0	0.0000000000113	N/A	N/A
eggNOG-mapper	UHGV-1502577_39	1226322.HMPREF1545_00016	58.5	0.000000136	HNH endonuclease	N/A
Pfam	UHGV-1502577_39	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1502577_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1502577_39	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_40	phrog_392	119.2	4.5e-35	metal-dependent hydrolase	other
UniRef90	UHGV-1502577_40	UniRef90_UPI0012DD1D82	270.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1502577_40	665956.HMPREF1032_03101	200.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1502577_40	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1502577_40	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1502577_40	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-1502577_41	K07455	173.5	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1502577_41	phrog_148	204.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1502577_41	UniRef90_A0A329URJ6	456.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1502577_41	1408437.JNJN01000039_gene372	371.0	0	RecT family	N/A
Pfam	UHGV-1502577_41	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1502577_41	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1502577_41	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1502577_41	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_42	phrog_674	146.5	1.59748e-43	N/A	unknown function
UniRef90	UHGV-1502577_42	UniRef90_A0A847VXN8	134.0	2.98e-34	N/A	N/A
eggNOG-mapper	UHGV-1502577_42	888059.HMPREF9071_2097	100.0	5.41e-22	N/A	N/A
Pfam	UHGV-1502577_42	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1502577_42	PF07083	N/A	N/A	N/A	N/A
UniRef90	UHGV-1502577_45	UniRef90_A0A367GIH6	117.0	2.9e-32	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1502577_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1502577_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1502577_45	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1502577_46	K22300	50.4	0.00000000000005	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1502577_46	phrog_8	49.7	0.000000000000079	transcriptional regulator	transcription regulation
UniRef90	UHGV-1502577_46	UniRef90_R7K9V4	55.5	0.0000000102	Transcriptional regulator Cro/CI family	N/A
eggNOG-mapper	UHGV-1502577_46	649764.HMPREF0762_00713	52.8	0.0000000901	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1502577_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1502577_46	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1502577_46	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1502577_47	1163671.JAGI01000002_gene1246	79.7	8.93e-17	N/A	N/A
PHROG	UHGV-1502577_48	phrog_599	41.8	0.00000000002	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1502577_48	UniRef90_A0A7X9HGY8	100.0	2.54e-26	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-1502577_48	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1502577_48	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1502577_48	PF14354,TIGR03655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1502577_50	PF06531	N/A	N/A	N/A	N/A
PHROG	UHGV-1502577_54	phrog_8	51.9	0.000000000000016	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1502577_54	1378168.N510_01712	64.3	0.000000000629	N/A	N/A
Pfam	UHGV-1502577_54	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26