UHGV-1503453 (vOTU-013685)

Viral Genome: UHGV-1503453

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1503453
vOTU ID	vOTU-013685
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0245442
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.5 (High-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9796
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.54
Jumbo phage	No

Genome content
Genome length (bp)	35,181
GC content	42.42%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	93%
Average CDS length (bps)	694.09
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1503453_1	K07273	183.4	0	acm; lysozyme	N/A
PHROG	UHGV-1503453_1	phrog_291	142.2	4.19969e-42	endolysin	lysis
UniRef90	UHGV-1503453_1	UniRef90_D4M5A7	681.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-1503453_1	537007.BLAHAN_04972	192.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1503453_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1503453_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1503453_1	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1503453_2	PF13384,NF001074,COG3677	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_3	phrog_37799	73.1	1.3e-21	N/A	unknown function
UniRef90	UHGV-1503453_3	UniRef90_A0A373N7C7	286.0	0	Protein utxA	N/A
eggNOG-mapper	UHGV-1503453_3	411470.RUMGNA_02086	140.0	1.3e-40	N/A	N/A
Pfam	UHGV-1503453_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1503453_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1503453_3	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1503453_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_4	phrog_20274	145.5	2.00386e-43	N/A	unknown function
UniRef90	UHGV-1503453_4	UniRef90_A0A173TUK0	201.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-1503453_4	411902.CLOBOL_05645	155.0	0	N/A	N/A
Pfam	UHGV-1503453_4	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-1503453_4	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1503453_4	PF06541,COG4905	N/A	N/A	N/A	N/A
UniRef90	UHGV-1503453_5	UniRef90_UPI001C0C21D5	147.0	2.16999e-40	acyl carrier protein	N/A
eggNOG-mapper	UHGV-1503453_5	1235799.C818_04237	278.0	0	N/A	N/A
structural_annotation	UHGV-1503453_5	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-1503453_6	K06236	43.0	0.0000000000022	COL1A; collagen type I alpha	N/A
PHROG	UHGV-1503453_6	phrog_819	58.0	9.7e-17	tail protein	tail
UniRef90	UHGV-1503453_6	UniRef90_UPI001A9A6571	365.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1503453_6	877414.ATWA01000019_gene2051	80.5	0.0000000000000502	N/A	N/A
Pfam	UHGV-1503453_6	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1503453_6	PF05737	N/A	N/A	N/A	N/A
KOfam	UHGV-1503453_7	K16628	87.2	3.9e-26	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1503453_7	phrog_819	120.8	1.1e-36	tail protein	tail
UniRef90	UHGV-1503453_7	UniRef90_UPI0011C154AF	255.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1503453_7	290402.Cbei_3387	177.0	0	N/A	N/A
Pfam	UHGV-1503453_7	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-1503453_8	phrog_16164	75.5	3.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-1503453_8	33035.JPJF01000093_gene2236	166.0	0	N/A	N/A
structural_annotation	UHGV-1503453_8	PF10651,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-1503453_9	K07296	42.2	0.0000000000079	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-1503453_9	phrog_10972	45.3	0.00000000000095	tail fiber protein	tail
UniRef90	UHGV-1503453_9	UniRef90_A0A374E9Q0	400.0	0	Collagen-like protein	N/A
eggNOG-mapper	UHGV-1503453_9	1235798.C817_04596	127.0	7.68e-31	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-1503453_9	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1503453_9	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1503453_9	PF10651,NF007636,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_10	phrog_14030	136.1	1.50001e-40	N/A	unknown function
UniRef90	UHGV-1503453_10	UniRef90_A0A373N7H3	620.0	0	Peptidase M23	N/A
eggNOG-mapper	UHGV-1503453_10	33035.JPJF01000093_gene2240	321.0	0	NlpC/P60 family	N/A
Pfam	UHGV-1503453_10	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-1503453_10	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-1503453_10	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1503453_10	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_11	phrog_13289	397.9	0	tail protein	tail
UniRef90	UHGV-1503453_11	UniRef90_D4M5A0	1070.0	0	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-1503453_11	1235798.C817_02568	474.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1503453_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1503453_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1503453_11	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-1503453_11	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_12	phrog_33	61.5	2.1e-17	distal tail protein Dit	tail
UniRef90	UHGV-1503453_12	UniRef90_UPI000E50043B	357.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1503453_12	1235798.C817_04593	209.0	0	phage tail	N/A
COG	UHGV-1503453_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1503453_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1503453_13	K10421	54.1	0.0000000000000012	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1503453_13	phrog_23464	194.9	0	N/A	unknown function
UniRef90	UHGV-1503453_13	UniRef90_A0A1C6DTW9	119.0	3.85e-24	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1503453_13	1232452.BAIB02000007_gene1616	456.0	0	phage tail tape measure protein	N/A
COG	UHGV-1503453_13	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1503453_15	phrog_88	100.6	1.5e-29	major tail protein	tail
UniRef90	UHGV-1503453_15	UniRef90_D4M596	381.0	0	Phage major tail protein, phi13 family	N/A
Pfam	UHGV-1503453_15	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-1503453_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1503453_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1503453_15	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_16	phrog_5	48.3	0.00000000000023	tail completion or Neck1 protein	connector
UniRef90	UHGV-1503453_16	UniRef90_D4M595	243.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-1503453_16	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1503453_16	TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1503453_17	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1503453_18	UniRef90_D4M593	209.0	0	Phage head-tail adaptor, putative, SPP1 family	N/A
NCBIFam	UHGV-1503453_18	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1503453_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_20	phrog_10	88.6	5.5e-26	major head protein	head and packaging
UniRef90	UHGV-1503453_20	UniRef90_D4M591	709.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-1503453_20	1232452.BAIB02000007_gene1625	476.0	0	Phage capsid family	N/A
Pfam	UHGV-1503453_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1503453_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1503453_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1503453_20	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1503453_21	K01358	107.5	1.6e-31	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1503453_21	phrog_94	175.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1503453_21	UniRef90_D4M590	461.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1503453_21	1235792.C808_00085	207.0	0	Clp protease	N/A
Pfam	UHGV-1503453_21	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1503453_21	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1503453_21	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_22	phrog_12	85.3	5e-25	portal protein	head and packaging
UniRef90	UHGV-1503453_22	UniRef90_A0A844KEF3	444.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1503453_22	1232452.BAIB02000007_gene1627	279.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1503453_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1503453_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1503453_22	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_23	phrog_9	248.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1503453_23	UniRef90_D4M588	978.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-1503453_23	1232452.BAIB02000007_gene1629	553.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1503453_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1503453_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1503453_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1503453_23	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_24	phrog_5110	97.5	7.5e-29	terminase small subunit	head and packaging
UniRef90	UHGV-1503453_24	UniRef90_A0A1C5LZF0	103.0	3.25e-26	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-1503453_24	1220589.CD32_01745	62.8	0.0000000000803	Phage terminase, small subunit	N/A
Pfam	UHGV-1503453_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1503453_24	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1503453_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-1503453_25	K07451	47.7	0.00000000000028	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1503453_25	phrog_119	80.0	2.8e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1503453_25	UniRef90_A0A1Q6K9L9	224.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1503453_25	1232452.BAIB02000007_gene1631	95.5	4.37e-24	HNH nucleases	N/A
Pfam	UHGV-1503453_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1503453_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1503453_26	phrog_36	66.6	4.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1503453_26	UniRef90_UPI000E49B095	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-1503453_26	658655.HMPREF0988_02569	152.0	0	sigma factor activity	N/A
Pfam	UHGV-1503453_26	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1503453_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1503453_26	PF07374,MF_00674,TIGR02984,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_32	phrog_7566	111.9	2.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-1503453_32	665950.HMPREF1025_02547	171.0	0	N/A	N/A
PHROG	UHGV-1503453_33	phrog_15077	93.2	4.8e-27	N/A	unknown function
UniRef90	UHGV-1503453_33	UniRef90_A0A3A6HZA9	233.0	0	N/A	N/A
eggNOG-mapper	UHGV-1503453_33	1280698.AUJS01000007_gene1019	375.0	0	N/A	N/A
structural_annotation	UHGV-1503453_33	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_34	phrog_8470	228.7	0	N/A	unknown function
UniRef90	UHGV-1503453_34	UniRef90_UPI001C01E393	584.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1503453_34	1280698.AUJS01000007_gene1018	853.0	0	N/A	N/A
Pfam	UHGV-1503453_34	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1503453_34	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_35	phrog_4433	71.1	2.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1503453_35	1280698.AUJS01000007_gene1017	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-1503453_36	1280698.AUJS01000007_gene1016	233.0	0	N/A	N/A
KOfam	UHGV-1503453_37	K03469	66.2	6.7e-19	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1503453_37	phrog_531	68.2	1.2e-19	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1503453_37	UniRef90_D4M578	286.0	0	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-1503453_37	665950.HMPREF1025_02551	153.0	1.4013e-45	RNase H	N/A
Pfam	UHGV-1503453_37	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1503453_37	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1503453_37	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_38	phrog_3584	150.2	1.12104e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1503453_38	665950.HMPREF1025_02552	310.0	0	N/A	N/A
structural_annotation	UHGV-1503453_38	PF21578,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1503453_41	PF20037,COG3212	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_42	phrog_20330	83.1	2.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-1503453_42	565664.EFXG_02669	63.9	0.0000000000284	N/A	N/A
KOfam	UHGV-1503453_45	K18830	68.5	1e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1503453_45	phrog_4	51.6	0.000000000000021	transcriptional repressor	transcription regulation
UniRef90	UHGV-1503453_45	UniRef90_A0A1Q6K9L5	232.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1503453_45	1280698.AUJS01000007_gene1002	154.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1503453_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1503453_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1503453_45	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1503453_46	phrog_38135	64.5	9e-19	N/A	unknown function
UniRef90	UHGV-1503453_46	UniRef90_UPI001F3985DB	690.0	0	N/A	N/A
eggNOG-mapper	UHGV-1503453_46	411465.PEPMIC_00706	78.2	0.0000000000000161	N/A	N/A
Pfam	UHGV-1503453_46	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-1503453_46	COG0457	N/A	N/A	Tetratricopeptide (TPR) repeat	N/A
structural_annotation	UHGV-1503453_46	PF14020,PF21602	N/A	N/A	N/A	N/A
KOfam	UHGV-1503453_47	K06400	246.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1503453_47	phrog_95	259.2	0	integrase	integration and excision
UniRef90	UHGV-1503453_47	UniRef90_A0A374E9M4	1018.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1503453_47	97139.C824_00068	712.0	0	Recombinase	N/A
Pfam	UHGV-1503453_47	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1503453_47	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1503453_47	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1503453_47	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A