UHGV-1506250 (vOTU-119091)

Viral Genome: UHGV-1506250

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1506250
vOTU ID	vOTU-119091
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0240751
Associated BioSample	SAMEA1906577
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.73 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9788
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.55
Jumbo phage	No

Genome content
Genome length (bp)	35,333
GC content	39.42%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	65
CDS density	93%
Average CDS length (bps)	507.37
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1506250_1	UniRef90_A0A1C5S7G4	116.0	1.99e-32	DEDD_Tnp_IS110 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_1	742765.HMPREF9457_03376	117.0	4.48e-34	Transposase (IS116 IS110 IS902 family)	N/A
Pfam	UHGV-1506250_1	PF01548	N/A	N/A	Transposase	DEDD_Tnp_IS110
COG	UHGV-1506250_1	COG3547	N/A	N/A	Transposase	N/A
PHROG	UHGV-1506250_2	phrog_1129	74.7	7.8e-22	holin	lysis
UniRef90	UHGV-1506250_2	UniRef90_A0A8D9UII9	136.0	4.79999e-40	Holin	N/A
eggNOG-mapper	UHGV-1506250_2	411461.DORFOR_00721	103.0	9.71e-28	N/A	N/A
Pfam	UHGV-1506250_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1506250_2	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506250_3	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506250_4	UniRef90_UPI001BBD4500	131.0	1.23e-35	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1506250_4	397290.C810_01411	180.0	0	N/A	N/A
structural_annotation	UHGV-1506250_4	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_5	phrog_374	175.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506250_5	UniRef90_W5RV26	149.0	6.20005e-41	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1506250_5	1232453.BAIF02000058_gene1632	193.0	0	N/A	N/A
structural_annotation	UHGV-1506250_6	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506250_7	476272.RUMHYD_01968	184.0	0	N/A	N/A
structural_annotation	UHGV-1506250_7	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-1506250_10	K07273	162.4	0	acm; lysozyme	N/A
PHROG	UHGV-1506250_10	phrog_291	129.2	3.7e-38	endolysin	lysis
UniRef90	UHGV-1506250_10	UniRef90_UPI001D05F2B6	550.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1506250_10	1235800.C819_00458	213.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1506250_10	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1506250_10	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1506250_10	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1506250_10	PF01183,PF01471,MF_02227,NF007360,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_11	phrog_28918	158.0	0	N/A	unknown function
UniRef90	UHGV-1506250_11	UniRef90_A0A2H4J4V9	109.0	1.36e-20	Putative Tmp	N/A
eggNOG-mapper	UHGV-1506250_11	1298920.KI911353_gene2649	322.0	0	tape measure	N/A
COG	UHGV-1506250_11	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1506250_12	phrog_1194	49.6	0.000000000000057	N/A	unknown function
Pfam	UHGV-1506250_12	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1506250_12	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_13	phrog_18190	578.5	0	N/A	unknown function
UniRef90	UHGV-1506250_13	UniRef90_UPI001D0767E1	885.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1506250_13	1235790.C805_00089	361.0	0	N/A	N/A
PHROG	UHGV-1506250_16	phrog_17196	104.2	9.5e-31	kinase	other
eggNOG-mapper	UHGV-1506250_16	1235790.C805_00090	131.0	8.96e-32	N/A	N/A
structural_annotation	UHGV-1506250_16	PF13619	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_17	phrog_4	43.2	0.000000000007	transcriptional repressor	transcription regulation
UniRef90	UHGV-1506250_17	UniRef90_UPI001D074CCD	514.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_17	411463.EUBVEN_01507	65.1	0.00000000123	N/A	N/A
Pfam	UHGV-1506250_17	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1506250_17	PF13443,PF00717,MF_00015,NF041951,TIGR02228,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1506250_19	K18830	64.2	1.9e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1506250_19	phrog_8	56.0	6.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1506250_19	UniRef90_UPI001C01C52A	177.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_19	903814.ELI_1263	130.0	2.23e-37	Helix-turn-helix domain	N/A
Pfam	UHGV-1506250_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1506250_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1506250_19	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1506250_25	K07741	71.6	2.3e-20	antB; anti-repressor protein	N/A
PHROG	UHGV-1506250_25	phrog_373	91.7	9.1e-27	anti-repressor	transcription regulation
UniRef90	UHGV-1506250_25	UniRef90_A0A416G2X7	284.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_25	552396.HMPREF0863_00756	202.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-1506250_25	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1506250_25	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1506250_25	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_26	phrog_19890	81.2	1.1e-23	N/A	unknown function
UniRef90	UHGV-1506250_26	UniRef90_A0A352SFF8	301.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_26	1410650.JHWL01000003_gene2854	152.0	1.68156e-44	lytic transglycosylase activity	N/A
Pfam	UHGV-1506250_26	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1506250_26	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1506250_26	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_27	phrog_22292	60.3	2.7e-17	N/A	unknown function
UniRef90	UHGV-1506250_30	UniRef90_UPI001D091C1C	213.0	0	sporulation initiation factor Spo0A C-terminal domain-containing protein	N/A
Pfam	UHGV-1506250_30	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-1506250_30	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
structural_annotation	UHGV-1506250_30	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-1506250_31	K19171	72.1	4.8e-21	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1506250_31	phrog_77	146.6	1.59748e-43	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506250_31	UniRef90_A0A412RQV0	443.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_31	397290.C810_01461	429.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1506250_31	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1506250_31	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_32	phrog_2164	93.7	8.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-1506250_32	1260356.D920_00267	60.5	0.00000000333	N/A	N/A
structural_annotation	UHGV-1506250_33	PF02237,MF_00257,NF037951,COG4013	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506250_34	PF13973,PF04319,PF08962	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_35	phrog_2760	193.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506250_35	UniRef90_UPI001D08E6D4	491.0	0	phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1506250_35	397290.C810_01467	330.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-1506250_35	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1506250_35	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1506250_35	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1506250_35	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_36	phrog_25456	80.8	1.2e-23	N/A	unknown function
KOfam	UHGV-1506250_37	K06167	47.2	0.00000000000018	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1506250_37	phrog_392	174.9	0	metal-dependent hydrolase	other
UniRef90	UHGV-1506250_37	UniRef90_A0A352SIH6	417.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_37	1443122.Z958_05735	164.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1506250_37	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
dbAPIS	UHGV-1506250_37	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-1506250_37	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1506250_37	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_38	phrog_7711	135.1	2.2e-40	N/A	unknown function
UniRef90	UHGV-1506250_38	UniRef90_UPI001C38CAD2	107.0	1.4e-26	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-1506250_38	1226322.HMPREF1545_00031	144.0	9.86514e-43	N/A	N/A
PHROG	UHGV-1506250_39	phrog_19106	325.5	0	N/A	unknown function
UniRef90	UHGV-1506250_39	UniRef90_UPI001D086F0C	376.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1506250_39	658655.HMPREF0988_00875	248.0	0	N/A	N/A
structural_annotation	UHGV-1506250_39	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_43	phrog_8489	196.9	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506250_43	UniRef90_A0A352SFU9	215.0	0	DNA replication protein (Fragment)	N/A
eggNOG-mapper	UHGV-1506250_43	1415774.U728_867	153.0	4.34403e-44	DnaD domain protein	N/A
COG	UHGV-1506250_43	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1506250_43	TIGR01714	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506250_45	UniRef90_UPI001D064D4E	239.0	0	N/A	N/A
Pfam	UHGV-1506250_45	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1506250_45	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_46	phrog_26384	43.4	0.0000000000049	N/A	unknown function
PHROG	UHGV-1506250_48	phrog_8684	62.5	4.1e-23	N/A	unknown function
UniRef90	UHGV-1506250_48	UniRef90_A0A352SFV6	199.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_48	1121097.JCM15093_2710	62.8	0.0000000000904	YopX protein	N/A
Pfam	UHGV-1506250_48	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1506250_48	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_49	phrog_10714	56.8	1.7e-16	N/A	unknown function
UniRef90	UHGV-1506250_49	UniRef90_R5R2P7	70.1	0.000000000000256	DNA polymerase II large subunit	N/A
eggNOG-mapper	UHGV-1506250_49	428127.EUBDOL_01238	97.4	6.24e-25	N/A	N/A
PHROG	UHGV-1506250_50	phrog_599	43.7	0.0000000000054	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1506250_50	UniRef90_A0A173RHJ2	49.7	0.0000039	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-1506250_50	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1506250_50	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1506250_50	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_53	phrog_1578	46.8	0.00000000000024	N/A	unknown function
KOfam	UHGV-1506250_56	K00953	40.0	0.000000000031	FLAD1; FAD synthetase [EC:2.7.7.2]	N/A
PHROG	UHGV-1506250_56	phrog_424	48.6	0.00000000000011	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1506250_56	UniRef90_A0A412RQP5	188.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_56	537013.CLOSTMETH_01340	126.0	7.65e-33	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1506250_56	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1506250_56	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1506250_56	PF01507,NF002537,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1506250_57	phrog_424	63.5	2.5e-18	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1506250_57	UniRef90_A0A412RQR2	311.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1506250_57	1345695.CLSA_c30150	125.0	7.05e-31	N/A	N/A
COG	UHGV-1506250_57	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-1506250_58	K00571	112.3	5.4e-33	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1506250_58	phrog_23224	222.5	0	DNA methyltransferase	other
UniRef90	UHGV-1506250_58	UniRef90_UPI000462F5E4	363.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1506250_58	888049.HMPREF8578_0283	260.0	0	DNA methylase	N/A
PADLOC	UHGV-1506250_58	MTase_II_00172	103.6	2.8e-32	Type II methyltransferase	RM
Pfam	UHGV-1506250_58	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1506250_58	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1506250_58	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506250_59	UniRef90_UPI001D07A23A	245.0	0	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1506250_59	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506250_63	UniRef90_UPI001D05EDA5	134.0	7.02e-40	LuxR C-terminal-related transcriptional regulator	N/A
structural_annotation	UHGV-1506250_63	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1506250_65	K06400	267.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1506250_65	phrog_95	285.8	0	integrase	integration and excision
UniRef90	UHGV-1506250_65	UniRef90_UPI001D084942	903.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1506250_65	246199.CUS_6803	268.0	0	N/A	N/A
Pfam	UHGV-1506250_65	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1506250_65	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1506250_65	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1506250_65	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A