UHGV-1506377 (vOTU-076520)

Viral Genome: UHGV-1506377

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1506377
vOTU ID	vOTU-076520
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0239726
Associated BioSample	SAMEA2580217
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	91.55 (High-quality)
Trimmed provirus	No
CheckV viral markers	38
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	100.24
Jumbo phage	No

Genome content
Genome length (bp)	35,186
GC content	42.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	93%
Average CDS length (bps)	758.86
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1506377_1	phrog_25348	163.3	0	N/A	unknown function
UniRef90	UHGV-1506377_1	UniRef90_A0A2C5WGU6	399.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1506377_1	1277892.M1IEW6_9CAUD	150.0	2.64005e-42	ERF superfamily	N/A
Pfam	UHGV-1506377_1	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1506377_1	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_2	phrog_674	281.1	0	N/A	unknown function
UniRef90	UHGV-1506377_2	UniRef90_UPI001582FF97	535.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506377_2	1239381.K4JU67_9CAUD	222.0	0	N/A	N/A
Pfam	UHGV-1506377_2	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1506377_2	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1506377_3	K03111	166.6	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1506377_3	phrog_44	173.3	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506377_3	UniRef90_A0A1V0H7S2	314.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1506377_3	646413.C5IUI2_9CAUD	258.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1506377_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1506377_3	NF005580.0	N/A	N/A	single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1506377_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1506377_3	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1506377_5	K01160	53.7	0.0000000000000062	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1506377_5	phrog_34	65.1	1.4e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506377_5	UniRef90_A0A191KC42	191.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1506377_5	1123318.KB904586_gene519	118.0	3.44e-33	N/A	N/A
PHROG	UHGV-1506377_6	phrog_1982	151.6	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1506377_6	UniRef90_Q9XJU9	134.0	1.7e-39	Orf89 gp	N/A
structural_annotation	UHGV-1506377_6	PF13560,NF040507,COG1813	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_7	phrog_1489	98.5	3.6e-29	N/A	unknown function
UniRef90	UHGV-1506377_7	UniRef90_O34049	78.2	3.81e-18	ORF18	N/A
structural_annotation	UHGV-1506377_7	PF13773	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_8	phrog_121	122.5	2.8e-36	N/A	unknown function
UniRef90	UHGV-1506377_8	UniRef90_UPI0015D26941	327.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506377_8	365659.smi_0429	111.0	7.68e-29	N/A	N/A
Pfam	UHGV-1506377_8	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1506377_8	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_9	phrog_7711	124.2	6.4e-37	N/A	unknown function
UniRef90	UHGV-1506377_9	UniRef90_A0A0N7JDH6	127.0	2.19e-35	N/A	N/A
eggNOG-mapper	UHGV-1506377_9	1282664.H354_07595	189.0	0	N/A	N/A
PHROG	UHGV-1506377_10	phrog_1994	217.4	0	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506377_10	UniRef90_A0A1F1HC29	199.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1506377_10	306323.Q56S64_9CAUD	193.0	0	sequence-specific DNA binding	N/A
structural_annotation	UHGV-1506377_10	PF12643,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_11	phrog_2882	434.2	0	DNA methyltransferase	other
UniRef90	UHGV-1506377_11	UniRef90_A0A412ABA3	504.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1506377_11	565653.EGBG_01954	354.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-1506377_11	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1506377_11	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1506377_11	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_12	phrog_884	130.3	4.8e-39	N/A	unknown function
UniRef90	UHGV-1506377_12	UniRef90_UPI0012BD7281	163.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506377_12	365659.smi_0433	55.8	0.0000000053	N/A	N/A
Pfam	UHGV-1506377_12	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1506377_12	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_13	phrog_98	95.4	5e-28	N/A	unknown function
UniRef90	UHGV-1506377_13	UniRef90_UPI0012BC103C	206.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1506377_13	1461246.X2KPG8_9VIRU	105.0	2.35e-27	YopX protein	N/A
Pfam	UHGV-1506377_13	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1506377_13	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1506377_13	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_14	phrog_1814	297.6	0	N/A	unknown function
UniRef90	UHGV-1506377_14	UniRef90_UPI001A933801	420.0	0	N/A	N/A
Pfam	UHGV-1506377_14	PF07067	N/A	N/A	N/A	DUF1340
structural_annotation	UHGV-1506377_14	PF07067	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_15	phrog_248	133.2	1.3e-39	transcriptional activator	transcription regulation
UniRef90	UHGV-1506377_15	UniRef90_A0A191KC45	266.0	0	ArpU late transcriptional regulator	N/A
eggNOG-mapper	UHGV-1506377_15	1403946.Q615_SPAC00127G0144	153.0	8.40779e-45	Transcriptional regulator, ArpU family	N/A
NCBIFam	UHGV-1506377_15	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
KOfam	UHGV-1506377_16	K07474	92.1	1.2e-26	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1506377_16	phrog_51	119.5	2.4e-35	terminase small subunit	head and packaging
UniRef90	UHGV-1506377_16	UniRef90_UPI001BDE0009	285.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1506377_16	1054460.SPPN_00130	216.0	0	DNA packaging	N/A
Pfam	UHGV-1506377_16	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1506377_16	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1506377_16	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1506377_17	K06909	117.0	1.9e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1506377_17	phrog_5653	197.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1506377_17	UniRef90_U6E9B3	811.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1506377_17	73422.L0P509_9CAUD	820.0	0	Terminase-like family	N/A
Pfam	UHGV-1506377_17	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1506377_17	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1506377_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
structural_annotation	UHGV-1506377_17	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_18	phrog_64	454.0	0	portal protein	head and packaging
UniRef90	UHGV-1506377_18	UniRef90_C9W9H5	874.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1506377_18	682370.C9W9H5_9CAUD	874.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1506377_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1506377_18	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1506377_18	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_19	phrog_115	258.1	0	minor head protein	head and packaging
UniRef90	UHGV-1506377_19	UniRef90_A0A2H4J030	555.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1506377_19	1385385.U6E9F1_9CAUD	412.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1506377_19	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1506377_19	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-1506377_19	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_20	phrog_172	99.8	3.2e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-1506377_20	UniRef90_O80168	296.0	0	Gp193	N/A
eggNOG-mapper	UHGV-1506377_20	1123315.AUIP01000003_gene242	116.0	7.96e-30	N/A	N/A
Pfam	UHGV-1506377_20	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1506377_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_21	phrog_909	92.7	2.8e-27	major head protein	head and packaging
UniRef90	UHGV-1506377_21	UniRef90_A0A2X3UEG8	207.0	0	Phage structural protein	N/A
eggNOG-mapper	UHGV-1506377_21	1123302.KB904182_gene70	89.7	1.75e-21	N/A	N/A
structural_annotation	UHGV-1506377_21	PF02924	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1506377_22	682370.C9W9H9_9CAUD	108.0	1.42e-27	Phage major capsid protein E	N/A
PHROG	UHGV-1506377_23	phrog_29	217.0	0	major head protein	head and packaging
UniRef90	UHGV-1506377_23	UniRef90_O34062	492.0	0	ORF31	N/A
eggNOG-mapper	UHGV-1506377_23	85154.O34062_BPO12	492.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1506377_23	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1506377_23	PF03864,MF_04133,NF041162	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_24	phrog_5279	83.9	1e-24	N/A	unknown function
UniRef90	UHGV-1506377_24	UniRef90_O34063	86.7	1.79e-21	ORF32	N/A
PHROG	UHGV-1506377_25	phrog_132	91.9	4.8e-27	head-tail adaptor	connector
UniRef90	UHGV-1506377_25	UniRef90_O34064	205.0	0	ORF33	N/A
eggNOG-mapper	UHGV-1506377_25	1123302.KB904182_gene68	155.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1506377_25	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1506377_25	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_26	phrog_348	89.8	2.5e-26	minor head protein	head and packaging
UniRef90	UHGV-1506377_26	UniRef90_O34065	179.0	0	ORF34	N/A
eggNOG-mapper	UHGV-1506377_26	1605.Lani381_0863	55.1	0.0000000201	N/A	N/A
structural_annotation	UHGV-1506377_26	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_27	phrog_5	69.3	8.2e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-1506377_27	UniRef90_UPI0015D3C8F3	205.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1506377_27	682370.C9W9I3_9CAUD	168.0	0	exonuclease activity	N/A
NCBIFam	UHGV-1506377_27	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1506377_27	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_28	phrog_176	103.4	1.7e-30	tail terminator	connector
UniRef90	UHGV-1506377_28	UniRef90_O34067	231.0	0	ORF36	N/A
eggNOG-mapper	UHGV-1506377_28	682370.C9W9I4_9CAUD	241.0	0	N/A	N/A
structural_annotation	UHGV-1506377_28	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_29	phrog_238	170.1	0	major tail protein	tail
UniRef90	UHGV-1506377_29	UniRef90_A0A2X3UI79	295.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1506377_29	1385385.U6E9D4_9CAUD	283.0	0	Phage major tail protein 2	N/A
Pfam	UHGV-1506377_29	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-1506377_29	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1506377_29	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_30	phrog_183	93.6	2.1e-27	tail chaperone protein	tail
UniRef90	UHGV-1506377_30	UniRef90_UPI0015D30B22	218.0	0	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1506377_30	682370.C9W9I6_9CAUD	209.0	0	Pfam:Phage_TAC_12	N/A
Pfam	UHGV-1506377_30	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-1506377_30	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_31	phrog_441	67.6	2e-19	tail assembly chaperone	tail
UniRef90	UHGV-1506377_31	UniRef90_O34070	158.0	0	ORF39	N/A
PHROG	UHGV-1506377_32	phrog_1204	1074.9	0	tail protein	tail
UniRef90	UHGV-1506377_32	UniRef90_UPI00189ABB19	1112.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1506377_32	85154.O34071_BPO12	1104.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1506377_32	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-1506377_32	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-1506377_32	TIGR02675.1	N/A	N/A	tape measure protein	N/A
PHROG	UHGV-1506377_33	phrog_202	373.5	0	distal tail protein Dit	tail
UniRef90	UHGV-1506377_33	UniRef90_UPI0015D26FBF	1033.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1506377_33	78541.O80180_9CAUD	675.0	0	Phage tail protein	N/A
Pfam	UHGV-1506377_33	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1506377_33	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1506377_33	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
KOfam	UHGV-1506377_34	K16628	50.5	0.0000000000000043	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1506377_34	phrog_588	1318.9	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-1506377_34	UniRef90_A0A2H4IZZ5	2640.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506377_34	682370.C9W9J0_9CAUD	1224.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1506377_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1506377_34	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1506377_34	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
NCBIFam	UHGV-1506377_34	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1506377_34	PF14594,PF00629,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_35	phrog_372	618.8	0	tail protein	tail
UniRef90	UHGV-1506377_35	UniRef90_UPI0015D19CD2	1211.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506377_35	682370.C9W9J1_9CAUD	715.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1506377_35	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1506377_35	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_36	phrog_1060	168.7	0	N/A	unknown function
UniRef90	UHGV-1506377_36	UniRef90_UPI00189C3811	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506377_36	1321820.HMPREF1983_00919	51.2	0.00000437	N/A	N/A
Pfam	UHGV-1506377_36	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1506377_36	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_37	phrog_1567	95.4	2.5e-28	N/A	unknown function
UniRef90	UHGV-1506377_37	UniRef90_A0A139RNG9	95.1	2.94e-24	N/A	N/A
PHROG	UHGV-1506377_38	phrog_4257	151.7	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1506377_38	UniRef90_A0A1L2JYP2	230.0	0	Transcription termination factor	N/A
eggNOG-mapper	UHGV-1506377_38	997830.HMPREF1124_0612	186.0	0	N/A	N/A
PHROG	UHGV-1506377_39	phrog_33625	73.3	1.8e-21	holin	lysis
UniRef90	UHGV-1506377_39	UniRef90_T0UKS3	179.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-1506377_39	1297534.CAUJ01000005_gene166	125.0	2.56e-36	Holin, phage phi LC3 family	N/A
Pfam	UHGV-1506377_39	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1506377_39	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1506377_39	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506377_39	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_40	phrog_6487	145.3	3.19496e-43	N/A	unknown function
UniRef90	UHGV-1506377_40	UniRef90_A0A3S4LRZ3	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506377_40	936154.STP_1259	60.5	0.0000000142	lipolytic protein G-D-S-L family	N/A
COG	UHGV-1506377_40	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
structural_annotation	UHGV-1506377_40	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1506377_41	phrog_4757	52.1	0.00000000000001	N/A	unknown function
KOfam	UHGV-1506377_43	K07273	102.7	5e-30	acm; lysozyme	N/A
PHROG	UHGV-1506377_43	phrog_8577	531.2	0	endolysin	lysis
UniRef90	UHGV-1506377_43	UniRef90_A0A4D6BE28	900.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1506377_43	372457.A7DYC5_9CAUD	302.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1506377_43	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1506377_43	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
structural_annotation	UHGV-1506377_43	PF01183,PF05257,COG3942	N/A	N/A	N/A	N/A