UHGV-1506403 (vOTU-119824)

Viral Genome: UHGV-1506403

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1506403
vOTU ID	vOTU-119824
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0266409
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	70.4 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.08
Jumbo phage	No

Genome content
Genome length (bp)	24,369
GC content	32.93%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	33
CDS density	93%
Average CDS length (bps)	689.27
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1506403_1	K21471	41.2	0.00000000003	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-1506403_1	phrog_998	248.3	0	endolysin	lysis
UniRef90	UHGV-1506403_1	UniRef90_A0A3R9L8K9	369.0	0	Bacteriophage peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-1506403_1	873448.STRPO_0302	335.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1506403_1	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-1506403_1	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1506403_1	PF05382,PF18341,NF033742,COG0791,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_2	phrog_962	80.4	2.4e-23	holin	lysis
UniRef90	UHGV-1506403_2	UniRef90_A0A2N6SFH9	98.2	4.46e-25	Phage holin	N/A
eggNOG-mapper	UHGV-1506403_2	1234679.BN424_2123	89.0	3.46e-22	Holin, phage phi LC3 family	N/A
Pfam	UHGV-1506403_2	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1506403_2	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1506403_2	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506403_2	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_3	phrog_4257	81.0	1.7e-23	N/A	unknown function
UniRef90	UHGV-1506403_3	UniRef90_A0A139MZU5	60.8	0.000000000672	N/A	N/A
eggNOG-mapper	UHGV-1506403_3	1123302.KB904167_gene532	74.3	0.00000000000000209	N/A	N/A
PHROG	UHGV-1506403_5	phrog_1554	48.8	0.00000000000013	N/A	unknown function
UniRef90	UHGV-1506403_5	UniRef90_A0A420YQX1	107.0	1.2e-26	N/A	N/A
eggNOG-mapper	UHGV-1506403_5	562981.HMPREF0428_01807	52.4	0.00000145	N/A	N/A
Pfam	UHGV-1506403_5	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1506403_5	PF07104,TIGR00638	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_6	phrog_2270	480.8	0	N/A	unknown function
UniRef90	UHGV-1506403_6	UniRef90_A0A420YQM7	897.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506403_6	1321820.HMPREF1983_00922	478.0	0	N/A	N/A
Pfam	UHGV-1506403_6	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1506403_6	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1506403_6	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1506403_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1506403_6	PF14594,PF03422,PF17994,MF_00813,TIGR01665,NF033675,TIGR03511,TIGR02961,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_7	phrog_33	66.2	8.3e-19	distal tail protein Dit	tail
UniRef90	UHGV-1506403_7	UniRef90_U2Q4W7	331.0	0	Phage tail component protein	N/A
eggNOG-mapper	UHGV-1506403_7	1321820.HMPREF1983_00923	331.0	0	tail component	N/A
COG	UHGV-1506403_7	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1506403_7	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_8	phrog_58	373.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1506403_8	UniRef90_U2QMT3	773.0	0	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-1506403_8	1321820.HMPREF1983_00924	773.0	0	Phage tail tape measure protein	N/A
COG	UHGV-1506403_8	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506403_8	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_9	phrog_1633	168.9	0	N/A	unknown function
UniRef90	UHGV-1506403_9	UniRef90_A0A139NAW5	148.0	6.44597e-44	N/A	N/A
eggNOG-mapper	UHGV-1506403_9	1321820.HMPREF1983_00925	180.0	0	N/A	N/A
Pfam	UHGV-1506403_9	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1506403_9	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_10	phrog_1526	113.5	8.4e-34	N/A	unknown function
UniRef90	UHGV-1506403_10	UniRef90_D2BQF7	104.0	1.28e-27	N/A	N/A
eggNOG-mapper	UHGV-1506403_10	1321820.HMPREF1983_00926	124.0	3.84e-36	N/A	N/A
PHROG	UHGV-1506403_11	phrog_117	189.9	0	major tail protein	tail
UniRef90	UHGV-1506403_11	UniRef90_U2QNN1	318.0	0	Prophage LambdaSa1, structural protein	N/A
eggNOG-mapper	UHGV-1506403_11	1321820.HMPREF1983_00927	318.0	0	domain, Protein	N/A
COG	UHGV-1506403_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506403_11	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_12	phrog_123	69.0	7.8e-20	tail terminator	connector
UniRef90	UHGV-1506403_12	UniRef90_A0A0E8ZUI3	131.0	2.05e-37	Gp45	N/A
eggNOG-mapper	UHGV-1506403_12	1321820.HMPREF1983_00928	183.0	0	N/A	N/A
structural_annotation	UHGV-1506403_12	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_13	phrog_387	87.9	7.7e-26	neck protein	connector
UniRef90	UHGV-1506403_13	UniRef90_A0A139NAV7	89.4	8.2e-22	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1506403_13	1321820.HMPREF1983_00929	114.0	2.34e-32	N/A	N/A
PHROG	UHGV-1506403_14	phrog_501	106.2	2.1e-31	head closure Hc1	connector
UniRef90	UHGV-1506403_14	UniRef90_Q7Y4I1	164.0	0	Gp43	N/A
eggNOG-mapper	UHGV-1506403_14	1321820.HMPREF1983_00930	182.0	0	N/A	N/A
structural_annotation	UHGV-1506403_14	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_15	phrog_137	111.9	3.4e-33	head-tail adaptor Ad1	connector
UniRef90	UHGV-1506403_15	UniRef90_U2RW81	216.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1506403_15	1321820.HMPREF1983_00931	216.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1506403_15	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1506403_15	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_17	phrog_32396	170.6	0	N/A	unknown function
UniRef90	UHGV-1506403_17	UniRef90_A0A2N6SCF3	530.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1506403_17	1214184.ALKY01000039_gene918	483.0	0	Phage capsid family	N/A
Pfam	UHGV-1506403_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-1506403_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_18	phrog_233	117.5	1.5e-34	head scaffolding protein	head and packaging
UniRef90	UHGV-1506403_18	UniRef90_A0A2N6SCG6	241.0	0	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-1506403_18	1321820.HMPREF1983_00934	191.0	0	N/A	N/A
structural_annotation	UHGV-1506403_18	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_19	phrog_17688	499.3	0	N/A	unknown function
UniRef90	UHGV-1506403_19	UniRef90_U2S4W8	900.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1506403_19	1321820.HMPREF1983_00935	900.0	0	phage terminase, large subunit	N/A
COG	UHGV-1506403_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1506403_19	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_20	phrog_2494	323.2	0	minor head protein	head and packaging
UniRef90	UHGV-1506403_20	UniRef90_U2RW86	616.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1506403_20	1321820.HMPREF1983_00936	616.0	0	N/A	N/A
Pfam	UHGV-1506403_20	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
structural_annotation	UHGV-1506403_20	PF18451	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_21	phrog_104	303.5	0	portal protein	head and packaging
UniRef90	UHGV-1506403_21	UniRef90_A0A4J1ZT89	715.0	0	Gp34	N/A
eggNOG-mapper	UHGV-1506403_21	1321820.HMPREF1983_00937	843.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1506403_21	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_22	phrog_338	107.0	2.2e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506403_22	UniRef90_A0A2N6SCF6	185.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1506403_22	1321820.HMPREF1983_00938	184.0	0	HNH endonuclease	N/A
Pfam	UHGV-1506403_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1506403_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1506403_22	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_23	phrog_36	44.8	0.0000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-1506403_23	UniRef90_A0A533I0C4	120.0	3.46e-32	N/A	N/A
Pfam	UHGV-1506403_23	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1506403_23	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1506403_23	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506403_24	TIGR02338	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506403_25	UniRef90_UPI001A470AE5	93.2	1.2e-20	med21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506403_25	1321820.HMPREF1983_00940	100.0	2.12e-24	N/A	N/A
structural_annotation	UHGV-1506403_26	MF_01360,NF010236	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_28	phrog_98	69.4	4.5e-20	N/A	unknown function
UniRef90	UHGV-1506403_28	UniRef90_A0A2X4RDW9	127.0	6.03e-35	YopX protein	N/A
eggNOG-mapper	UHGV-1506403_28	562981.HMPREF0428_00992	80.5	1.6e-17	YopX protein	N/A
Pfam	UHGV-1506403_28	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1506403_28	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1506403_28	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_29	phrog_12650	70.2	1.4e-20	N/A	unknown function
structural_annotation	UHGV-1506403_29	NF010673	N/A	N/A	N/A	N/A
KOfam	UHGV-1506403_30	K06223	61.9	1e-17	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1506403_30	phrog_56	140.1	1.70006e-41	DNA methyltransferase	other
UniRef90	UHGV-1506403_30	UniRef90_A0A533I256	310.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-1506403_30	745088.D4N4H5_9CAUD	271.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1506403_30	MTase_II_00075	191.7	0	Type II methyltransferase	RM
Pfam	UHGV-1506403_30	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-1506403_30	PF02086,TIGR00571,COG0338	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506403_31	UniRef90_A0A2X4N3T8	120.0	8.28e-35	Predicted transcriptional regulator	N/A
Pfam	UHGV-1506403_31	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1506403_31	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1506403_31	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1506403_32	K14440	126.4	6.2e-38	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1506403_32	phrog_62	406.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506403_32	UniRef90_A0A2X4N6J8	899.0	0	DNA methylase	N/A
eggNOG-mapper	UHGV-1506403_32	1235799.C818_04202	610.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-1506403_32	ZorD1_00007	86.2	3.8e-25	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1506403_32	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1506403_32	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1506403_32	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1506403_32	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1506403_33	phrog_93	68.0	1.4e-19	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506403_33	UniRef90_A0A2X4N3Y7	175.0	0	VRR-NUC domain	N/A
eggNOG-mapper	UHGV-1506403_33	879308.HMPREF9130_0833	83.6	7.37e-20	VRR_NUC	N/A
structural_annotation	UHGV-1506403_33	PF01974,MF_01490,NF011269	N/A	N/A	N/A	N/A