UHGV-1508176 (vOTU-036139)

Viral Genome: UHGV-1508176

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1508176
vOTU ID	vOTU-036139
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0219881
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.74 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.02
Jumbo phage	No

Genome content
Genome length (bp)	29,516
GC content	40.78%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	91%
Average CDS length (bps)	514.50
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1508176_1	phrog_7854	136.5	0	endolysin	lysis
UniRef90	UHGV-1508176_1	UniRef90_A0A373SW30	696.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1508176_1	411462.DORLON_00764	225.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1508176_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1508176_1	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1508176_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1508176_1	PF01520,TIGR02883,COG0860,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_2	phrog_18218	134.9	2.4e-40	N/A	unknown function
UniRef90	UHGV-1508176_2	UniRef90_A0A373SUI3	194.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-1508176_2	658655.HMPREF0988_02546	155.0	0	N/A	N/A
structural_annotation	UHGV-1508176_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_3	phrog_1863	55.8	3.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1508176_3	1226322.HMPREF1545_04027	66.2	0.000000000000257	N/A	N/A
PHROG	UHGV-1508176_5	phrog_13589	48.6	4.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1508176_5	411460.RUMTOR_01324	68.2	0.0000000000784	N/A	N/A
PHROG	UHGV-1508176_6	phrog_13589	198.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1508176_6	742733.HMPREF9469_05009	272.0	0	N/A	N/A
PHROG	UHGV-1508176_7	phrog_31538	79.4	4.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-1508176_7	742740.HMPREF9474_02274	53.9	0.000000171	N/A	N/A
PHROG	UHGV-1508176_8	phrog_15594	101.1	6.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1508176_8	1118055.CAGU01000013_gene763	58.9	0.000000000537	N/A	N/A
structural_annotation	UHGV-1508176_8	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_9	phrog_25635	260.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1508176_9	1280698.AUJS01000007_gene1050	252.0	0	N/A	N/A
structural_annotation	UHGV-1508176_9	PF20747,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_10	phrog_538	217.0	0	minor tail protein	tail
UniRef90	UHGV-1508176_10	UniRef90_UPI001F3E20C1	457.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1508176_10	1280698.AUJS01000007_gene1049	451.0	0	N/A	N/A
Pfam	UHGV-1508176_10	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1508176_10	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_11	phrog_33	54.8	0.0000000000000024	distal tail protein Dit	tail
UniRef90	UHGV-1508176_11	UniRef90_UPI00156E3DDD	522.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1508176_11	1280698.AUJS01000007_gene1048	382.0	0	N/A	N/A
structural_annotation	UHGV-1508176_11	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_12	phrog_6900	264.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1508176_12	UniRef90_A0A174L0T5	801.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1508176_12	1280698.AUJS01000007_gene1047	558.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1508176_12	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1508176_12	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_13	phrog_1633	145.8	1.30321e-43	N/A	unknown function
UniRef90	UHGV-1508176_13	UniRef90_UPI0006C2F0F2	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1508176_13	1280698.AUJS01000007_gene1046	145.0	1.30321e-43	N/A	N/A
Pfam	UHGV-1508176_13	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1508176_13	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_14	phrog_1526	106.3	1.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-1508176_14	665950.HMPREF1025_02524	92.8	1.14e-23	N/A	N/A
PHROG	UHGV-1508176_15	phrog_117	186.3	0	major tail protein	tail
UniRef90	UHGV-1508176_15	UniRef90_UPI00156E6ACC	310.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1508176_15	1280698.AUJS01000007_gene1044	273.0	0	domain, Protein	N/A
COG	UHGV-1508176_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1508176_15	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_16	phrog_123	55.8	8.4e-16	tail terminator	connector
eggNOG-mapper	UHGV-1508176_16	1280698.AUJS01000007_gene1043	162.0	0	N/A	N/A
structural_annotation	UHGV-1508176_16	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_17	phrog_387	41.9	0.0000000000076	neck protein	connector
eggNOG-mapper	UHGV-1508176_17	908337.HMPREF9257_0534	52.0	0.0000000567	N/A	N/A
PHROG	UHGV-1508176_18	phrog_501	93.7	1.6e-27	head closure Hc1	connector
eggNOG-mapper	UHGV-1508176_18	1280698.AUJS01000007_gene1041	184.0	0	N/A	N/A
structural_annotation	UHGV-1508176_18	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_19	phrog_137	60.4	2.8e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-1508176_19	UniRef90_UPI0015704514	185.0	0	Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-1508176_19	742742.HMPREF9452_01301	51.2	0.00000233	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1508176_19	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1508176_19	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_21	phrog_10	105.6	6.1e-31	major head protein	head and packaging
UniRef90	UHGV-1508176_21	UniRef90_A0A174L023	569.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-1508176_21	205876.Q855V6_9CAUD	298.0	0	peptidase activity	N/A
Pfam	UHGV-1508176_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1508176_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1508176_21	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_22	phrog_233	85.9	8.4e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-1508176_22	UniRef90_A0A3E4GMR3	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-1508176_22	1408304.JAHA01000007_gene1323	102.0	2.35e-26	N/A	N/A
Pfam	UHGV-1508176_22	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1508176_22	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_23	phrog_2428	95.6	3.9e-28	N/A	unknown function
UniRef90	UHGV-1508176_23	UniRef90_A0A396QA65	247.0	0	ABC transporter ATPase	N/A
eggNOG-mapper	UHGV-1508176_23	632245.CLP_1645	192.0	0	N/A	N/A
dbAPIS	UHGV-1508176_23	APIS024	N/A	N/A	Tad1 proteins are not an enzymes, but are 'sponges' that bind and sequester the immune signaling molecule (cyclic ADP-ribose or gcADPR) produced by TIR-domain proteins, thus decoupling phage sensing from immune effector activation and rendering Thoeris inactive.	N/A
PHROG	UHGV-1508176_25	phrog_355	62.9	4.7e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1508176_25	UniRef90_A0A396KGT7	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-1508176_25	97138.C820_00250	127.0	7.94e-37	N/A	N/A
Pfam	UHGV-1508176_25	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1508176_25	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_27	phrog_193	160.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1508176_27	UniRef90_A0A6N8H118	265.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1508176_27	748224.HMPREF9436_01469	277.0	0	N/A	N/A
COG	UHGV-1508176_27	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-1508176_28	phrog_104	237.1	0	portal protein	head and packaging
UniRef90	UHGV-1508176_28	UniRef90_A0A174L3Q9	948.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1508176_28	1123263.AUKY01000112_gene2059	577.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1508176_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1508176_28	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_29	phrog_9	172.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1508176_29	UniRef90_UPI001D0087E2	882.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1508176_29	1123263.AUKY01000112_gene2060	692.0	0	phage terminase, large subunit	N/A
COG	UHGV-1508176_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1508176_29	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_30	phrog_338	60.1	4.8e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1508176_30	UniRef90_UPI00156E0A7C	206.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1508176_30	748224.HMPREF9436_01465	168.0	0	N/A	N/A
UniRef90	UHGV-1508176_32	UniRef90_A0A0K3A362	114.0	1.23e-25	Putative membrane protein	N/A
eggNOG-mapper	UHGV-1508176_32	889378.Spiaf_1410	123.0	1.18e-29	N/A	N/A
PHROG	UHGV-1508176_33	phrog_36	59.9	4.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1508176_33	UniRef90_A0A416MN03	126.0	1.87e-34	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1508176_33	1256908.HMPREF0373_00671	186.0	0	N/A	N/A
structural_annotation	UHGV-1508176_33	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_35	phrog_229	118.2	4e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-1508176_35	UniRef90_A0A396PR63	270.0	0	Nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-1508176_35	765420.OSCT_3070	108.0	1.17e-28	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1508176_35	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1508176_35	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1508176_35	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_39	phrog_3675	62.5	5.4e-18	N/A	unknown function
UniRef90	UHGV-1508176_39	UniRef90_A0A1M6NYB4	91.3	6.29e-22	YjcQ protein	N/A
eggNOG-mapper	UHGV-1508176_39	1507.HMPREF0262_00644	76.6	4.46e-17	YjcQ protein	N/A
Pfam	UHGV-1508176_39	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1508176_39	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
KOfam	UHGV-1508176_40	K00558	187.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1508176_40	phrog_116	223.4	0	DNA methyltransferase	other
UniRef90	UHGV-1508176_40	UniRef90_A0A373MWF0	826.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1508176_40	742740.HMPREF9474_04317	706.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1508176_40	MTase_II_00020	92.9	1.3e-30	Type II methyltransferase	RM
Pfam	UHGV-1508176_40	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1508176_40	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1508176_40	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-1508176_42	UniRef90_UPI0006C0F90C	307.0	0	N/A	N/A
Pfam	UHGV-1508176_42	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1508176_42	PF04448,NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1508176_43	PF20037,COG3212	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_44	phrog_28456	56.3	6.4e-16	N/A	unknown function
PHROG	UHGV-1508176_45	phrog_28292	138.3	1.40004e-41	N/A	unknown function
UniRef90	UHGV-1508176_45	UniRef90_A0A8B3BZ84	90.5	2.53e-22	3-hydroxyacyl-CoA dehydrogenase	N/A
eggNOG-mapper	UHGV-1508176_45	500632.CLONEX_01438	76.3	1.84e-17	N/A	N/A
UniRef90	UHGV-1508176_47	UniRef90_A0A1C5ULX1	106.0	9.89e-29	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1508176_47	1232446.BAIE02000002_gene796	62.0	0.00000000000808	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1508176_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1508176_47	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1508176_49	K18830	76.4	4e-22	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1508176_49	phrog_8	60.2	3.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1508176_49	UniRef90_A0A3E4LWU1	214.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1508176_49	445972.ANACOL_03315	140.0	1.54998e-41	N/A	N/A
Pfam	UHGV-1508176_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1508176_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1508176_49	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1508176_52	phrog_8279	71.5	8e-21	N/A	unknown function
UniRef90	UHGV-1508176_52	UniRef90_UPI00191DFC1A	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-1508176_52	742723.HMPREF9477_00941	284.0	0	dextransucrase activity	N/A
Pfam	UHGV-1508176_52	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-1508176_52	COG3118	N/A	N/A	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	N/A
structural_annotation	UHGV-1508176_52	PF14020,PF21602	N/A	N/A	N/A	N/A