UHGV-1510948 (vOTU-029802)

Viral Genome: UHGV-1510948

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1510948
vOTU ID	vOTU-029802
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0301920
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.56 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.72
Jumbo phage	No

Genome content
Genome length (bp)	37,272
GC content	54.81%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	95%
Average CDS length (bps)	559.67
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.56)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1510948_1	UniRef90_UPI000E31DAF9	91.3	8.59e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1510948_1	445974.CLORAM_02965	87.0	6.49e-22	N/A	N/A
structural_annotation	UHGV-1510948_1	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1510948_5	PF12728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1510948_7	PF06003,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-1510948_8	K21919	58.2	1.1e-16	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-1510948_8	phrog_9562	137.5	2.70002e-41	N/A	unknown function
UniRef90	UHGV-1510948_8	UniRef90_A0A1C5W9L2	271.0	0	Type III effector pipB2	N/A
eggNOG-mapper	UHGV-1510948_8	1226322.HMPREF1545_00011	258.0	0	Pentapeptide repeats (8 copies)	N/A
Pfam	UHGV-1510948_8	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-1510948_8	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-1510948_8	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1510948_8	PF19062,PF13599	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_9	phrog_22529	88.9	3.7e-26	N/A	unknown function
UniRef90	UHGV-1510948_9	UniRef90_A0A7T7IG06	231.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-1510948_9	1226322.HMPREF1545_00012	205.0	0	3D domain	N/A
Pfam	UHGV-1510948_9	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1510948_9	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-1510948_9	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
COG	UHGV-1510948_10	COG0145	N/A	N/A	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	N/A
structural_annotation	UHGV-1510948_10	PF01381,PF13613,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_12	phrog_298	73.4	2.3e-22	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1510948_12	UniRef90_UPI00058C5410	97.1	9.14e-22	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-1510948_12	1445613.JALM01000017_gene5894	73.2	0.000000000000454	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-1510948_12	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1510948_12	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_13	phrog_10048	50.6	2.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1510948_13	1304880.JAGB01000002_gene2238	103.0	4.76e-24	N/A	N/A
structural_annotation	UHGV-1510948_13	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
KOfam	UHGV-1510948_14	K03111	44.5	0.0000000000035	ssb; single-strand DNA-binding protein	N/A
UniRef90	UHGV-1510948_14	UniRef90_A0A4D7AYE9	270.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1510948_14	693746.OBV_12860	52.8	0.00000106	Single-strand binding protein family	N/A
Pfam	UHGV-1510948_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-1510948_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1510948_14	PF00436,MF_00984,NF006297,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_15	phrog_16304	158.0	0	N/A	unknown function
UniRef90	UHGV-1510948_15	UniRef90_UPI001C10203E	118.0	1.49e-29	N/A	N/A
eggNOG-mapper	UHGV-1510948_15	1226322.HMPREF1545_00016	211.0	0	HNH endonuclease	N/A
Pfam	UHGV-1510948_15	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1510948_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1510948_15	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1510948_16	K17680	190.3	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-1510948_16	phrog_239	148.0	8.12753e-44	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1510948_16	UniRef90_U2QJC2	838.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1510948_16	1226322.HMPREF1545_00017	838.0	0	DnaB-like helicase C terminal domain	N/A
Pfam	UHGV-1510948_16	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1510948_16	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1510948_16	PF03796,MF_04154,NF006606,COG0467	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_18	phrog_4632	89.0	2.8e-27	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1510948_18	UniRef90_A0A7X8IB41	118.0	4.52e-32	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1510948_18	469604.HMPREF0946_00819	56.6	0.000000014	N/A	N/A
structural_annotation	UHGV-1510948_18	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1510948_20	521098.Aaci_0567	71.6	0.00000000000223	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1510948_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1510948_21	phrog_599	41.8	0.000000000021	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1510948_21	UniRef90_A0A4D7ANR2	176.0	0	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-1510948_21	742738.HMPREF9460_04054	75.5	1.44e-16	Restriction alleviation protein Lar	N/A
Pfam	UHGV-1510948_21	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1510948_21	PF14354,TIGR03655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1510948_22	PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_24	phrog_10714	69.6	3.2e-20	N/A	unknown function
UniRef90	UHGV-1510948_24	UniRef90_UPI001C3A10B1	58.9	0.0000000119	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1510948_24	1226322.HMPREF1545_00023	160.0	0	N/A	N/A
PHROG	UHGV-1510948_27	phrog_25732	49.8	0.000000000000023	N/A	unknown function
structural_annotation	UHGV-1510948_27	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_29	phrog_37865	60.5	2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1510948_31	665956.HMPREF1032_00143	50.1	0.00000054	N/A	N/A
PHROG	UHGV-1510948_32	phrog_7711	150.6	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-1510948_32	1226322.HMPREF1545_00031	241.0	0	N/A	N/A
UniRef90	UHGV-1510948_33	UniRef90_A0A1C5WAG7	123.0	1.8e-35	Restriction alleviation protein, Lar family	N/A
PHROG	UHGV-1510948_35	phrog_1726	177.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-1510948_35	UniRef90_A0A4D7AT73	399.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1510948_35	1444309.JAQG01000145_gene2705	128.0	1.43e-33	Phage regulatory protein	N/A
Pfam	UHGV-1510948_35	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1510948_35	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1510948_35	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1510948_35	PF09669,PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1510948_36	UniRef90_A0A810QFN4	478.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1510948_36	1519439.JPJG01000011_gene53	962.0	0	N/A	N/A
eggNOG-mapper	UHGV-1510948_37	693746.OBV_01600	233.0	0	N/A	N/A
PHROG	UHGV-1510948_39	phrog_20016	192.9	0	N/A	unknown function
UniRef90	UHGV-1510948_39	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1510948_39	1226322.HMPREF1545_00077	171.0	0	N/A	N/A
structural_annotation	UHGV-1510948_39	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_40	phrog_16490	318.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1510948_40	1226322.HMPREF1545_00076	275.0	0	N/A	N/A
PHROG	UHGV-1510948_41	phrog_22984	122.0	1.9e-36	N/A	unknown function
PHROG	UHGV-1510948_42	phrog_21718	175.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1510948_42	397290.C810_05210	56.2	0.0000000716	N/A	N/A
PHROG	UHGV-1510948_43	phrog_3754	123.2	8.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-1510948_43	1226322.HMPREF1545_00073	261.0	0	N/A	N/A
UniRef90	UHGV-1510948_45	UniRef90_U2R3E6	128.0	1.58e-37	KORA domain-containing protein	N/A
structural_annotation	UHGV-1510948_45	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1510948_46	K01447	110.8	1.8e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1510948_46	phrog_670	153.0	2.8026e-45	endolysin	lysis
UniRef90	UHGV-1510948_46	UniRef90_U2SBT6	434.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1510948_46	1226322.HMPREF1545_00070	434.0	0	Ami_2	N/A
Pfam	UHGV-1510948_46	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1510948_46	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1510948_46	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_47	phrog_1129	71.5	8.3e-21	holin	lysis
UniRef90	UHGV-1510948_47	UniRef90_A0A1C7FPV3	130.0	9.68e-38	Enolase	N/A
eggNOG-mapper	UHGV-1510948_47	1226322.HMPREF1545_00069	166.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1510948_47	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1510948_47	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_49	phrog_937	48.7	0.000000000000066	hemolysin	other
eggNOG-mapper	UHGV-1510948_49	445972.ANACOL_01873	117.0	1.51e-32	N/A	N/A
PHROG	UHGV-1510948_50	phrog_2310	59.6	3e-17	N/A	unknown function
PHROG	UHGV-1510948_51	phrog_4628	44.0	0.0000000000042	tail fiber assembly	tail
eggNOG-mapper	UHGV-1510948_51	1226322.HMPREF1545_00128	100.0	3.49e-26	N/A	N/A
PHROG	UHGV-1510948_52	phrog_10993	313.4	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-1510948_52	UniRef90_A0A4D7AM78	1109.0	0	N/A	N/A
eggNOG-mapper	UHGV-1510948_52	1226322.HMPREF1545_00064	601.0	0	N/A	N/A
Pfam	UHGV-1510948_52	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1510948_52	PF19789,PF19081,PF12733,PF18463,MF_04116,NF032891,COG3401	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_54	phrog_156	100.7	1e-30	portal protein	head and packaging
eggNOG-mapper	UHGV-1510948_54	693746.OBV_01670	776.0	0	N/A	N/A
structural_annotation	UHGV-1510948_54	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1510948_55	UniRef90_A0A4D7ASB8	1233.0	0	N/A	N/A
eggNOG-mapper	UHGV-1510948_55	1519439.JPJG01000011_gene54	763.0	0	N/A	N/A
structural_annotation	UHGV-1510948_55	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-1510948_56	K06909	141.8	6.09985e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1510948_56	phrog_979	149.2	1.4013e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1510948_56	UniRef90_A0A4D7AXL6	974.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1510948_56	693746.OBV_01690	694.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1510948_56	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1510948_56	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1510948_56	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1510948_57	phrog_422	131.7	5.2e-39	major head protein	head and packaging
UniRef90	UHGV-1510948_57	UniRef90_K1TJJ5	313.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-1510948_57	693746.OBV_01700	461.0	0	N/A	N/A
structural_annotation	UHGV-1510948_57	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1510948_59	UniRef90_A0A4D7B2L2	141.0	5.8294e-43	Cysteine-rich KTR domain-containing protein	N/A
Pfam	UHGV-1510948_59	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-1510948_59	PF14205,COG4416	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1510948_60	1519439.JPJG01000011_gene57	139.0	6.22e-40	N/A	N/A
structural_annotation	UHGV-1510948_60	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-1510948_62	UniRef90_A0A4D7AM67	275.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1510948_62	1519439.JPJG01000011_gene59	85.5	5.81e-19	N/A	N/A