UHGV-1512171 (vOTU-067999)

Viral Genome: UHGV-1512171

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1512171
vOTU ID	vOTU-067999
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0248443
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.91 (High-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.975
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	-3.88
Jumbo phage	No

Genome content
Genome length (bp)	32,347
GC content	44.28%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	95%
Average CDS length (bps)	628.16
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-1512171_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1512171_1	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1512171_5	phrog_155	144.4	7.10458e-43	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1512171_5	UniRef90_A0A1G9NLL5	175.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-1512171_5	97138.C820_00777	163.0	0	ERF superfamily	N/A
Pfam	UHGV-1512171_5	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1512171_5	PF04404,TIGR00607,COG5468	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_6	phrog_72	63.0	5.1e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1512171_6	1304866.K413DRAFT_1197	175.0	0	N/A	N/A
structural_annotation	UHGV-1512171_6	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_7	phrog_7566	105.8	2e-31	N/A	unknown function
eggNOG-mapper	UHGV-1512171_7	411459.RUMOBE_00948	81.3	1.14e-18	N/A	N/A
structural_annotation	UHGV-1512171_8	PF09105,MF_01804,TIGR00738,COG1386	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_9	phrog_20437	153.6	1.4013e-45	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1512171_9	UniRef90_A0A3D0X9I8	144.0	1.14e-40	DNA replication protein DnaD (Fragment)	N/A
eggNOG-mapper	UHGV-1512171_9	445971.ANASTE_00700	140.0	1.16e-38	N/A	N/A
Pfam	UHGV-1512171_9	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1512171_9	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-1512171_11	phrog_111	151.3	4.2039e-45	DNA methyltransferase	other
UniRef90	UHGV-1512171_11	UniRef90_A0A1Y4EVK6	219.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-1512171_11	1121121.KB894312_gene3179	195.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-1512171_11	oMTase_00015	175.0	0	orphan methyltransferase	RM
Pfam	UHGV-1512171_11	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-1512171_11	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
KOfam	UHGV-1512171_13	K03111	151.5	8.40779e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1512171_13	phrog_44	140.5	9.99967e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1512171_13	UniRef90_A0A3D2D458	162.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1512171_13	555088.DealDRAFT_2203	120.0	3.69e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1512171_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1512171_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1512171_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1512171_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1512171_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1512171_14	UniRef90_A0A098GES5	96.7	3.92e-24	Putative phage associated protein	N/A
structural_annotation	UHGV-1512171_14	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
KOfam	UHGV-1512171_16	K00558	162.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1512171_16	phrog_363	212.2	0	DNA methyltransferase	other
UniRef90	UHGV-1512171_16	UniRef90_UPI001D069725	220.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1512171_16	693746.OBV_01900	213.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1512171_16	DruM2_00001	144.8	1.10002e-42	DNA cytosine methylase	Druantia
Pfam	UHGV-1512171_16	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1512171_16	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1512171_16	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1512171_16	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_17	phrog_30559	47.3	0.00000000000039	N/A	unknown function
eggNOG-mapper	UHGV-1512171_18	397290.C810_01492	51.6	0.00000374	N/A	N/A
PHROG	UHGV-1512171_20	phrog_3136	126.1	1.3e-37	N/A	unknown function
UniRef90	UHGV-1512171_20	UniRef90_UPI001C26B029	124.0	3.31e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1512171_20	1235793.C809_02645	57.4	0.000000283	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1512171_20	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1512171_20	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1512171_20	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_21	phrog_36	55.1	0.0000000000000017	transcriptional regulator	transcription regulation
structural_annotation	UHGV-1512171_21	PF07374,MF_00674,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_22	phrog_16619	66.0	2.6e-19	minor head protein	head and packaging
eggNOG-mapper	UHGV-1512171_24	908338.HMPREF9286_0178	61.6	0.0000000000041	N/A	N/A
Pfam	UHGV-1512171_24	PF20111	N/A	N/A	N/A	DUF6501
PHROG	UHGV-1512171_25	phrog_34144	43.4	0.0000000000041	N/A	unknown function
eggNOG-mapper	UHGV-1512171_25	908338.HMPREF9286_0178	60.1	0.0000000000288	N/A	N/A
KOfam	UHGV-1512171_26	K07473	110.1	2.3e-32	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-1512171_26	phrog_2737	79.4	2.8e-23	N/A	unknown function
UniRef90	UHGV-1512171_26	UniRef90_A0A0J1IF91	111.0	4.18e-30	RelB antitoxin	N/A
eggNOG-mapper	UHGV-1512171_26	904296.HMPREF9124_0826	108.0	5.28e-30	RelB antitoxin	N/A
Pfam	UHGV-1512171_26	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-1512171_26	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-1512171_26	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-1512171_26	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
KOfam	UHGV-1512171_27	K19157	114.5	9.8e-34	yafQ; mRNA interferase YafQ [EC:3.1.-.-]	N/A
PHROG	UHGV-1512171_27	phrog_7251	112.2	1.9e-33	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1512171_27	UniRef90_UPI001C3C3C29	129.0	3.16e-37	type II toxin-antitoxin system YafQ family toxin	N/A
eggNOG-mapper	UHGV-1512171_27	883110.HMPREF9260_01085	120.0	1.19e-34	Bacterial toxin of type II toxin-antitoxin system, YafQ	N/A
Pfam	UHGV-1512171_27	PF15738	N/A	N/A	Bacterial toxin of type II toxin-antitoxin system, YafQ	YafQ_toxin
NCBIFam	UHGV-1512171_27	TIGR02385.1	N/A	N/A	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	N/A
COG	UHGV-1512171_27	COG3041	N/A	N/A	mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-1512171_27	PF15738,TIGR00053,COG3041	N/A	N/A	N/A	N/A
Pfam	UHGV-1512171_28	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1512171_28	PF02796,NF040785	N/A	N/A	N/A	N/A
KOfam	UHGV-1512171_29	K06909	135.7	4.5e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1512171_29	phrog_3717	83.4	2.5e-24	terminase large subunit	head and packaging
UniRef90	UHGV-1512171_29	UniRef90_A0A3D2E0R8	331.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1512171_29	320840.Q4ZCF2_9CAUD	74.7	0.0000000000124	Phage terminase large subunit	N/A
Pfam	UHGV-1512171_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
structural_annotation	UHGV-1512171_29	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_30	phrog_533	89.1	3.2e-26	portal protein	head and packaging
eggNOG-mapper	UHGV-1512171_30	40522.A8ASJ3_BPA50	60.1	0.00000113	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1512171_30	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_31	phrog_581	95.8	5.1e-28	minor head protein	head and packaging
UniRef90	UHGV-1512171_31	UniRef90_A0A2Z4GUI4	207.0	0	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1512171_31	997296.PB1_16234	79.0	0.000000000000125	Phage minor capsid protein 2	N/A
Pfam	UHGV-1512171_31	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1512171_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1512171_31	PF06152,TIGR01641	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1512171_33	PF05065,PF13620,MF_04119,TIGR04387,TIGR04134,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1512171_35	PF07405,TIGR01563	N/A	N/A	N/A	N/A
UniRef90	UHGV-1512171_36	UniRef90_A0A2Z4GU91	97.4	2.38e-24	Minor capsid protein	N/A
structural_annotation	UHGV-1512171_37	PF09393,PF05561,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_39	phrog_2523	47.5	0.00000000000023	N/A	unknown function
UniRef90	UHGV-1512171_39	UniRef90_UPI001296285A	77.0	9.3e-16	type II toxin-antitoxin system RelE/ParE family toxin	N/A
eggNOG-mapper	UHGV-1512171_39	622312.ROSEINA2194_03213	73.9	0.00000000000000225	N/A	N/A
Pfam	UHGV-1512171_39	PF05973	N/A	N/A	N/A	Gp49
COG	UHGV-1512171_39	COG4679	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1512171_39	PF05973,TIGR02683,COG4683	N/A	N/A	N/A	N/A
KOfam	UHGV-1512171_40	K15773	51.5	0.000000000000023	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-1512171_40	phrog_1373	49.2	0.000000000000058	transcriptional regulator	transcription regulation
UniRef90	UHGV-1512171_40	UniRef90_A0A6I0F7R4	68.2	0.00000000000207	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1512171_40	635013.TherJR_1621	64.3	0.0000000000107	PFAM helix-turn-helix	N/A
Pfam	UHGV-1512171_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1512171_40	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
KOfam	UHGV-1512171_41	K03071	50.8	0.000000000000028	secB; preprotein translocase subunit SecB	N/A
PHROG	UHGV-1512171_41	phrog_21664	71.5	1.4e-20	N/A	unknown function
UniRef90	UHGV-1512171_41	UniRef90_UPI0005A72A1C	90.5	1.73e-20	protein-export chaperone SecB	N/A
eggNOG-mapper	UHGV-1512171_41	1423754.BALY01000009_gene72	66.6	0.00000000000442	Preprotein translocase subunit SecB	N/A
Pfam	UHGV-1512171_41	PF02556	N/A	N/A	Preprotein translocase subunit SecB	SecB
COG	UHGV-1512171_41	COG1952	N/A	N/A	Preprotein translocase subunit SecB	N/A
structural_annotation	UHGV-1512171_41	PF02556,MF_00821,NF004391,COG1952	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1512171_44	PF09097,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1512171_45	PF06013,MF_00683,NF003844,COG4842	N/A	N/A	N/A	N/A
PHROG	UHGV-1512171_46	phrog_24103	46.6	0.00000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1512171_47	428125.CLOLEP_01434	58.9	0.000000385	N/A	N/A