UHGV-1513438 (vOTU-072731)

Viral Genome: UHGV-1513438

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1513438
vOTU ID	vOTU-072731
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0302837
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.43 (High-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9806
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.76
Jumbo phage	No

Genome content
Genome length (bp)	36,832
GC content	38.53%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	92%
Average CDS length (bps)	662.59
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1513438_2	phrog_87	100.8	8.7e-30	metallo-protease	other
UniRef90	UHGV-1513438_2	UniRef90_A0A173S221	272.0	0	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-1513438_2	411460.RUMTOR_02055	186.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1513438_2	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1513438_2	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1513438_2	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1513438_3	K22299	68.6	1.3e-19	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1513438_3	phrog_8	80.5	2.6e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1513438_3	UniRef90_A0A6N2R371	280.0	0	HTH-type transcriptional regulator Xre	N/A
eggNOG-mapper	UHGV-1513438_3	411460.RUMTOR_02056	127.0	9.17e-36	Bacteriophage CI repressor helix-turn-helix domain	N/A
PADLOC	UHGV-1513438_3	retron_type_VI_hth_cluster2_1	50.3	0.000000000000044	N/A	Retron
Pfam	UHGV-1513438_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1513438_3	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1513438_3	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1513438_4	K07729	46.7	0.00000000000066	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-1513438_4	UniRef90_A0A6N2R2H0	138.0	1.57996e-41	HTH-type transcriptional regulator Xre	N/A
eggNOG-mapper	UHGV-1513438_4	1132442.KB889752_gene869	84.3	1.12e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1513438_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1513438_4	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1513438_5	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_6	phrog_6058	43.0	0.0000000000056	N/A	unknown function
UniRef90	UHGV-1513438_6	UniRef90_A0A1Q2C3Y4	184.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1513438_6	742740.HMPREF9474_02381	72.8	0.00000000000000406	N/A	N/A
PHROG	UHGV-1513438_9	phrog_3777	113.2	9e-34	N/A	unknown function
UniRef90	UHGV-1513438_9	UniRef90_UPI00142FF24A	60.1	0.00000000624	N/A	N/A
structural_annotation	UHGV-1513438_9	PF18441	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_10	phrog_434	164.1	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513438_10	UniRef90_B0P3C0	429.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-1513438_10	1095750.HMPREF9970_1677	282.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1513438_10	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1513438_10	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1513438_10	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1513438_10	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_13	phrog_674	162.7	0	N/A	unknown function
UniRef90	UHGV-1513438_13	UniRef90_A0A415G8D2	298.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513438_13	742740.HMPREF9474_03487	194.0	0	N/A	N/A
Pfam	UHGV-1513438_13	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1513438_13	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_14	phrog_2760	212.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513438_14	UniRef90_A0A415G8D8	343.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1513438_14	536233.CLO_0507	213.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-1513438_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1513438_14	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1513438_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1513438_14	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_15	phrog_997	145.7	1.59748e-43	replication terminator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1513438_15	411461.DORFOR_00017	146.0	3.82554e-43	N/A	N/A
PHROG	UHGV-1513438_16	phrog_1029	267.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1513438_16	411461.DORFOR_00016	243.0	0	N/A	N/A
structural_annotation	UHGV-1513438_16	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-1513438_17	K01160	60.2	5.6e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1513438_17	phrog_140	129.7	1.6e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513438_17	UniRef90_D4MWK7	286.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1513438_17	857293.CAAU_0790	132.0	1.19e-37	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1513438_17	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1513438_17	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1513438_17	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513438_18	UniRef90_D4MWK8	218.0	0	HNH endonuclease	N/A
Pfam	UHGV-1513438_18	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1513438_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1513438_19	phrog_2562	127.1	2.9e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513438_19	UniRef90_B0P3C8	544.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513438_19	537013.CLOSTMETH_01717	189.0	0	N/A	N/A
Pfam	UHGV-1513438_19	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1513438_19	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1513438_19	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-1513438_20	K07741	202.4	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1513438_20	phrog_63	172.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1513438_20	UniRef90_A0A173RE69	475.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-1513438_20	658655.HMPREF0988_02592	303.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1513438_20	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1513438_20	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1513438_20	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1513438_20	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_21	phrog_17690	184.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1513438_21	1235798.C817_03495	60.1	0.00000000183	N/A	N/A
PHROG	UHGV-1513438_24	phrog_31515	125.4	1e-37	N/A	unknown function
PHROG	UHGV-1513438_25	phrog_21101	42.5	8.2e-16	N/A	unknown function
UniRef90	UHGV-1513438_25	UniRef90_D4MWL6	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513438_25	592028.GCWU000321_00789	95.1	1.99e-24	N/A	N/A
Pfam	UHGV-1513438_25	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1513438_25	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1513438_25	PF07866,COG4728	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_27	phrog_36	61.9	1.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1513438_27	UniRef90_R6ZAS5	134.0	3.18e-37	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-1513438_27	411490.ANACAC_00789	156.0	0	N/A	N/A
structural_annotation	UHGV-1513438_27	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_28	phrog_1048	166.3	0	N/A	unknown function
UniRef90	UHGV-1513438_28	UniRef90_A0A374AMV7	299.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513438_28	457412.RSAG_01107	248.0	0	N/A	N/A
Pfam	UHGV-1513438_28	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1513438_28	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1513438_28	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_29	phrog_918	96.4	1.5e-28	N/A	unknown function
UniRef90	UHGV-1513438_29	UniRef90_UPI00189D39C2	180.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513438_29	1256908.HMPREF0373_00480	174.0	0	N/A	N/A
Pfam	UHGV-1513438_29	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1513438_29	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-1513438_30	K07474	131.3	1.3e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1513438_30	phrog_51	146.0	1.79366e-43	terminase small subunit	head and packaging
UniRef90	UHGV-1513438_30	UniRef90_A0A417V811	315.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1513438_30	1298920.KI911353_gene4857	213.0	0	Terminase small subunit	N/A
Pfam	UHGV-1513438_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1513438_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1513438_30	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1513438_31	K06909	105.2	7.4e-31	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1513438_31	phrog_2	72.9	6.2e-21	terminase large subunit	head and packaging
UniRef90	UHGV-1513438_31	UniRef90_A0A417V8L6	922.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1513438_31	1304866.K413DRAFT_0811	743.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1513438_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1513438_31	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_32	phrog_533	278.1	0	portal protein	head and packaging
UniRef90	UHGV-1513438_32	UniRef90_A0A417V837	1056.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1513438_32	33035.JPJF01000093_gene2257	589.0	0	N/A	N/A
structural_annotation	UHGV-1513438_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_33	phrog_581	254.2	0	minor head protein	head and packaging
UniRef90	UHGV-1513438_33	UniRef90_UPI001B3C8EB1	369.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1513438_33	33035.JPJF01000093_gene2255	432.0	0	N/A	N/A
Pfam	UHGV-1513438_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1513438_33	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1513438_35	PF20873	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_36	phrog_2303	144.1	9.59889e-43	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1513438_36	742740.HMPREF9474_03504	175.0	0	N/A	N/A
PHROG	UHGV-1513438_37	phrog_422	272.8	0	major head protein	head and packaging
UniRef90	UHGV-1513438_37	UniRef90_A0A417V845	629.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1513438_37	663278.Ethha_1589	412.0	0	N/A	N/A
structural_annotation	UHGV-1513438_37	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_38	phrog_541	67.8	1.4e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1513438_38	1298920.KI911353_gene4848	134.0	4.92e-39	N/A	N/A
PHROG	UHGV-1513438_39	phrog_8710	142.8	8.1976e-43	N/A	unknown function
eggNOG-mapper	UHGV-1513438_39	742740.HMPREF9474_03508	141.0	4.05956e-42	N/A	N/A
structural_annotation	UHGV-1513438_39	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_40	phrog_556	56.0	6.4e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-1513438_40	742740.HMPREF9474_03509	160.0	0	N/A	N/A
PHROG	UHGV-1513438_41	phrog_2595	102.3	3.3e-30	head-tail connector protein	connector
UniRef90	UHGV-1513438_41	UniRef90_UPI001D0627B3	203.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1513438_41	679192.HMPREF9013_1297	140.0	4.19997e-41	N/A	N/A
Pfam	UHGV-1513438_41	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1513438_41	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_42	phrog_820	125.7	2.2e-37	major tail protein	tail
eggNOG-mapper	UHGV-1513438_42	1282664.H354_06691	204.0	0	N/A	N/A
structural_annotation	UHGV-1513438_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_43	phrog_8300	92.0	4.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-1513438_43	33035.JPJF01000093_gene2245	102.0	6.05e-27	N/A	N/A
structural_annotation	UHGV-1513438_43	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_44	phrog_8355	100.6	5.4e-30	N/A	unknown function
UniRef90	UHGV-1513438_44	UniRef90_UPI001D0684E3	125.0	1.09e-35	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1513438_44	33035.JPJF01000093_gene2244	94.0	2.6e-24	N/A	N/A
PHROG	UHGV-1513438_45	phrog_1535	256.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1513438_45	UniRef90_A0A1C5RRP4	459.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1513438_45	742740.HMPREF9474_03514	403.0	0	tape measure	N/A
COG	UHGV-1513438_45	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1513438_45	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_46	phrog_1194	79.4	3.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-1513438_46	33035.JPJF01000093_gene2242	130.0	7.61e-38	N/A	N/A
structural_annotation	UHGV-1513438_46	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_47	phrog_1401	55.4	0.000000000000001	N/A	unknown function
UniRef90	UHGV-1513438_47	UniRef90_UPI001A9A8A65	56.2	0.000000159	N/A	N/A
structural_annotation	UHGV-1513438_47	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1513438_48	phrog_16267	185.2	0	N/A	unknown function
UniRef90	UHGV-1513438_48	UniRef90_A0A417V835	1783.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1513438_48	1294142.CINTURNW_1706	213.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1513438_48	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1513438_48	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1513438_49	phrog_2566	76.7	1.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-1513438_49	543734.LCABL_09980	65.1	0.000000000000784	N/A	N/A
PHROG	UHGV-1513438_50	phrog_199	63.1	3.5e-18	holin	lysis
UniRef90	UHGV-1513438_50	UniRef90_A0A1Q2CAY6	288.0	0	Holin	N/A
eggNOG-mapper	UHGV-1513438_50	742723.HMPREF9477_00889	226.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1513438_50	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1513438_50	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1513438_50	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1513438_50	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1513438_51	K01448	101.5	9.2e-30	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1513438_51	phrog_435	153.6	1.4013e-45	endolysin	lysis
UniRef90	UHGV-1513438_51	UniRef90_UPI000985947E	353.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1513438_51	411490.ANACAC_00597	281.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-1513438_51	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1513438_51	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1513438_51	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A