UHGV-1521605 (vOTU-156521)

Viral Genome: UHGV-1521605

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1521605
vOTU ID	vOTU-156521
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0228532
Associated BioSample	SAMEA2737986
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.73 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9811
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.32
Jumbo phage	No

Genome content
Genome length (bp)	28,098
GC content	39.18%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	38
CDS density	95%
Average CDS length (bps)	705.08
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1521605_2	phrog_1529	43.6	0.000000000002	N/A	unknown function
PHROG	UHGV-1521605_4	phrog_199	78.7	6.4e-23	holin	lysis
UniRef90	UHGV-1521605_4	UniRef90_D2MPH1	219.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1521605_4	679192.HMPREF9013_1287	219.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1521605_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1521605_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1521605_4	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1521605_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1521605_5	K22409	134.6	9.79999e-40	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1521605_5	phrog_291	105.7	4.5e-31	endolysin	lysis
UniRef90	UHGV-1521605_5	UniRef90_E7MNY0	616.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1521605_5	706433.HMPREF9430_01251	616.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1521605_5	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1521605_5	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1521605_5	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1521605_5	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_6	phrog_30034	42.2	0.0000000000095	N/A	unknown function
UniRef90	UHGV-1521605_6	UniRef90_A0A521IRB0	54.3	0.00000835	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1521605_6	411467.BACCAP_00281	61.2	0.00000000435	N/A	N/A
Pfam	UHGV-1521605_6	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1521605_7	phrog_372	108.9	5.6e-32	tail protein	tail
eggNOG-mapper	UHGV-1521605_7	1399942.U3PFX4_9CAUD	66.6	0.0000000148	peptidoglycan catabolic process	N/A
PHROG	UHGV-1521605_8	phrog_18190	88.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1521605_8	1123263.AUKY01000015_gene1622	340.0	0	cellulase activity	N/A
COG	UHGV-1521605_8	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1521605_8	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_10	phrog_1535	147.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1521605_10	UniRef90_A0A1C6CG40	79.7	0.0000000000163	Phage-related protein	N/A
eggNOG-mapper	UHGV-1521605_10	1449050.JNLE01000003_gene3881	154.0	1.8e-35	domain protein	N/A
COG	UHGV-1521605_10	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_11	phrog_706	132.7	2.5e-39	N/A	unknown function
UniRef90	UHGV-1521605_11	UniRef90_UPI00051C36A4	199.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1521605_11	1449050.JNLE01000003_gene3882	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1521605_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1521605_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_12	phrog_11299	94.7	9.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-1521605_12	1449050.JNLE01000003_gene3883	80.9	2.24e-17	N/A	N/A
structural_annotation	UHGV-1521605_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_13	phrog_3099	136.8	1.2e-40	N/A	unknown function
eggNOG-mapper	UHGV-1521605_13	1304866.K413DRAFT_3043	175.0	0	N/A	N/A
structural_annotation	UHGV-1521605_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_14	phrog_3266	67.3	2.1e-19	tail completion	connector
eggNOG-mapper	UHGV-1521605_14	1449050.JNLE01000003_gene3885	98.2	4.02e-24	N/A	N/A
structural_annotation	UHGV-1521605_14	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_15	phrog_556	88.6	2e-26	minor head protein	head and packaging
UniRef90	UHGV-1521605_15	UniRef90_UPI000691B8FF	122.0	1.44e-32	minor capsid protein	N/A
eggNOG-mapper	UHGV-1521605_15	1449050.JNLE01000003_gene3886	122.0	2.41e-33	N/A	N/A
Pfam	UHGV-1521605_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1521605_15	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1521605_16	1304866.K413DRAFT_3040	47.8	0.00000716	N/A	N/A
PHROG	UHGV-1521605_17	phrog_541	59.8	4.4e-17	head-tail adaptor	connector
UniRef90	UHGV-1521605_17	UniRef90_A0A371AQT0	79.7	9.16e-17	N/A	N/A
eggNOG-mapper	UHGV-1521605_17	1449050.JNLE01000003_gene3888	66.2	0.00000000000263	N/A	N/A
PHROG	UHGV-1521605_19	phrog_422	205.6	0	major head protein	head and packaging
UniRef90	UHGV-1521605_19	UniRef90_W0U896	290.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1521605_19	641112.ACOK01000073_gene2894	301.0	0	N/A	N/A
structural_annotation	UHGV-1521605_19	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_20	phrog_194	94.0	2.1e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-1521605_20	UniRef90_UPI001592F515	111.0	9.61e-28	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1521605_20	411470.RUMGNA_02218	114.0	2.04e-29	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1521605_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1521605_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_21	phrog_581	309.9	0	minor head protein	head and packaging
UniRef90	UHGV-1521605_21	UniRef90_UPI00138F9ED1	342.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1521605_21	1449050.JNLE01000003_gene3892	321.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1521605_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1521605_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1521605_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_22	phrog_533	320.8	0	portal protein	head and packaging
UniRef90	UHGV-1521605_22	UniRef90_A0A3P1S3R5	474.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1521605_22	411470.RUMGNA_02212	409.0	0	N/A	N/A
structural_annotation	UHGV-1521605_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1521605_23	K06909	403.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1521605_23	phrog_3717	169.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1521605_23	UniRef90_A0A3P1S603	622.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1521605_23	411461.DORFOR_01162	488.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1521605_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1521605_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1521605_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1521605_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1521605_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1521605_24	UniRef90_F5KZP8	132.0	3.2e-36	Conserved domain protein	N/A
PHROG	UHGV-1521605_25	phrog_9479	164.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1521605_25	511680.BUTYVIB_01226	59.3	0.00000000214	N/A	N/A
structural_annotation	UHGV-1521605_25	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_26	phrog_940	347.5	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1521605_26	UniRef90_UPI0009327623	488.0	0	N/A	N/A
eggNOG-mapper	UHGV-1521605_26	1232449.BAHV02000018_gene1534	367.0	0	N/A	N/A
PADLOC	UHGV-1521605_26	MTase_II_00015	135.2	7.1e-40	Type II methyltransferase	RM
Pfam	UHGV-1521605_26	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1521605_26	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1521605_26	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1521605_26	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1521605_27	PF04545,MF_00674,TIGR01636,COG1191	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1521605_29	1123263.AUKY01000072_gene2097	48.9	0.00000414	N/A	N/A
eggNOG-mapper	UHGV-1521605_30	1123263.AUKY01000072_gene2097	59.3	0.000000000213	N/A	N/A
structural_annotation	UHGV-1521605_30	PF10571	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_31	phrog_419	100.9	1.6e-29	N/A	unknown function
UniRef90	UHGV-1521605_31	UniRef90_A0A3F3A3T2	96.7	1.28e-24	Gp9	N/A
eggNOG-mapper	UHGV-1521605_31	1123263.AUKY01000015_gene1587	135.0	1.18001e-40	N/A	N/A
structural_annotation	UHGV-1521605_31	PF14083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1521605_32	PF14001,MF_01194,TIGR03318,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1521605_33	phrog_16527	106.5	2e-31	N/A	unknown function
PHROG	UHGV-1521605_35	phrog_478	121.5	3.5e-36	site-specific recombination directionality factor RDF	integration and excision
eggNOG-mapper	UHGV-1521605_35	1123263.AUKY01000096_gene1821	234.0	0	N/A	N/A
KOfam	UHGV-1521605_36	K00571	122.8	3.8e-36	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1521605_36	phrog_67	114.2	8e-35	DNA methyltransferase	other
UniRef90	UHGV-1521605_36	UniRef90_A0A890GYF3	444.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1521605_36	35241.Q9XJE8_BPTU2	389.0	0	helicase activity	N/A
PADLOC	UHGV-1521605_36	MTase_II_00157	98.7	3.5e-30	Type II methyltransferase	RM
Pfam	UHGV-1521605_36	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1521605_36	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1521605_37	K00558	228.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1521605_37	phrog_116	273.2	0	DNA methyltransferase	other
UniRef90	UHGV-1521605_37	UniRef90_UPI000428E765	443.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1521605_37	1123263.AUKY01000096_gene1822	443.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1521605_37	MTase_II_00058	264.2	0	Type II methyltransferase	RM
Pfam	UHGV-1521605_37	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1521605_37	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1521605_37	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1521605_37	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A