UHGV-1527072 (vOTU-007411)

Viral Genome: UHGV-1527072

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1527072
vOTU ID	vOTU-007411
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0314693
Associated BioSample	SAMN05065749
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9715
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.68
Jumbo phage	No

Genome content
Genome length (bp)	36,831
GC content	50.34%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	89%
Average CDS length (bps)	655.86
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1527072_2	545696.HOLDEFILI_01226	57.8	0.000000477	N/A	N/A
UniRef90	UHGV-1527072_3	UniRef90_A0A3D4KZ34	93.6	5.16e-24	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1527072_3	1160721.RBI_I01516	59.3	0.0000000000326	Helix-turn-helix domain	N/A
Pfam	UHGV-1527072_3	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1527072_3	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-1527072_3	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-1527072_3	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_5	K01356	74.6	1.6e-21	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1527072_5	phrog_4	95.5	5.3e-28	transcriptional repressor	transcription regulation
UniRef90	UHGV-1527072_5	UniRef90_A0A374I002	129.0	3.48e-33	S24 family peptidase	N/A
eggNOG-mapper	UHGV-1527072_5	1160721.RBI_II00559	125.0	3.52e-32	Peptidase S24-like	N/A
Pfam	UHGV-1527072_5	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1527072_5	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1527072_5	PF00717,PF01381,MF_00015,NF041951,NF007621,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_6	K07729	51.4	0.000000000000022	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1527072_6	phrog_8	56.0	9.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1527072_6	UniRef90_UPI001A9C3CE7	59.3	0.000000000712	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1527072_6	445974.CLORAM_00010	57.8	0.00000000431	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1527072_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1527072_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1527072_6	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_9	K22300	48.0	0.00000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1527072_9	phrog_37022	57.5	1.9e-16	N/A	unknown function
UniRef90	UHGV-1527072_9	UniRef90_U2C2N0	71.2	0.00000000000475	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-1527072_9	1235792.C808_05392	78.6	0.00000000000000362	RNA polymerase sigma factor, sigma-70 family	N/A
Pfam	UHGV-1527072_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-1527072_11	phrog_310	335.3	0	transposase	integration and excision
UniRef90	UHGV-1527072_11	UniRef90_R5H7J6	1253.0	0	Integrase core domain protein	N/A
eggNOG-mapper	UHGV-1527072_11	1160721.RBI_II00555	629.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-1527072_11	TnsB_0_V-K	69.9	9.7e-21	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-1527072_11	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-1527072_11	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-1527072_11	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-1527072_11	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_12	K02450	70.1	2.8e-20	gspA; general secretion pathway protein A	N/A
PHROG	UHGV-1527072_12	phrog_296	130.9	1.2e-38	DNA transposition protein	integration and excision
UniRef90	UHGV-1527072_12	UniRef90_A0A175A3H1	330.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1527072_12	1160721.RBI_II00554	241.0	0	AAA domain	N/A
Pfam	UHGV-1527072_12	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-1527072_12	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-1527072_12	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_14	K03698	54.3	0.0000000000000017	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-1527072_14	phrog_28876	169.8	0	metal-dependent phosphohydrolase	other
UniRef90	UHGV-1527072_14	UniRef90_UPI0010314CD2	191.0	0	HD domain-containing protein	N/A
eggNOG-mapper	UHGV-1527072_14	718252.FP2_01870	182.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-1527072_14	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-1527072_14	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_15	phrog_5671	88.4	7e-26	N/A	unknown function
eggNOG-mapper	UHGV-1527072_15	696281.Desru_1771	90.1	2.01e-21	N/A	N/A
PHROG	UHGV-1527072_16	phrog_19658	79.6	4.3e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1527072_16	1207076.ALAT01000105_gene1930	52.4	0.00000507	Bacteriophage replication protein O	N/A
KOfam	UHGV-1527072_17	K02315	166.0	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1527072_17	phrog_50	154.4	1.4013e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1527072_17	UniRef90_R5H034	419.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1527072_17	411459.RUMOBE_01035	206.0	0	N/A	N/A
Pfam	UHGV-1527072_17	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1527072_17	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1527072_17	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1527072_17	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
UniRef90	UHGV-1527072_18	UniRef90_R5GQZ8	149.0	4.2039e-45	Putative SpoVT / AbrB like domain protein	N/A
eggNOG-mapper	UHGV-1527072_18	552398.HMPREF0866_03129	65.1	0.000000000000803	SpoVT / AbrB like domain	N/A
Pfam	UHGV-1527072_18	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
COG	UHGV-1527072_18	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-1527072_18	PF04014,PF06689,MF_01364_A,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527072_19	1160721.RBI_II00551	114.0	1.33e-28	N/A	N/A
UniRef90	UHGV-1527072_20	UniRef90_UPI000F51F9E5	65.9	0.000000000171	regulatory protein GemA	N/A
eggNOG-mapper	UHGV-1527072_20	1160721.RBI_II00550	61.2	0.00000000197	N/A	N/A
Pfam	UHGV-1527072_20	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-1527072_20	PF06252	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527072_21	552398.HMPREF0866_03126	49.7	0.00000151	Mor transcription activator	N/A
COG	UHGV-1527072_21	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-1527072_21	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527072_22	411473.RUMCAL_01917	72.4	0.00000000000000572	N/A	N/A
PHROG	UHGV-1527072_23	phrog_25462	105.3	3.3e-31	N/A	unknown function
UniRef90	UHGV-1527072_23	UniRef90_A0A349GP70	86.3	9.02e-20	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-1527072_23	663278.Ethha_0086	72.4	0.00000000000000433	N/A	N/A
structural_annotation	UHGV-1527072_23	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_24	phrog_426	79.6	5.2e-23	terminase small subunit	head and packaging
UniRef90	UHGV-1527072_24	UniRef90_R5GR06	332.0	0	PF11985 family protein	N/A
eggNOG-mapper	UHGV-1527072_24	1160721.RBI_II00546	167.0	0	N/A	N/A
Pfam	UHGV-1527072_24	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-1527072_24	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_25	K02601	54.4	0.000000000000002	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-1527072_25	phrog_6386	87.1	1.9e-25	transcription antiterminator	transcription regulation
UniRef90	UHGV-1527072_25	UniRef90_A0A174ZTH1	117.0	3.39e-30	Transcription termination factor nusG	N/A
eggNOG-mapper	UHGV-1527072_25	485916.Dtox_4226	85.9	8.07e-19	antitermination protein NusG	N/A
Pfam	UHGV-1527072_25	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-1527072_25	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-1527072_25	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_26	phrog_309	41.1	0.000000000015	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-1527072_26	1160721.RBI_II00544	58.2	0.0000000149	N/A	N/A
structural_annotation	UHGV-1527072_26	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_27	K06909	124.1	1.5e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1527072_27	phrog_2	138.3	8.60005e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1527072_27	UniRef90_A0A355JEL9	408.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1527072_27	592031.GCWU000322_00074	243.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1527072_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1527072_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1527072_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1527072_27	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_28	phrog_533	253.8	0	portal protein	head and packaging
UniRef90	UHGV-1527072_28	UniRef90_R5H044	466.0	0	Phage portal protein putative A118 family	N/A
eggNOG-mapper	UHGV-1527072_28	883114.HMPREF9709_01198	142.0	7.52e-35	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1527072_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_29	phrog_581	291.3	0	minor head protein	head and packaging
UniRef90	UHGV-1527072_29	UniRef90_R6SXL7	304.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1527072_29	1292035.H476_1017	280.0	0	N/A	N/A
Pfam	UHGV-1527072_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1527072_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1527072_29	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1527072_30	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_32	phrog_194	74.7	1.6e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-1527072_32	UniRef90_UPI00117868A2	63.5	0.00000000392	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1527072_32	545697.HMPREF0216_02848	57.8	0.0000000921	Phage minor structural protein GP20	N/A
Pfam	UHGV-1527072_32	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1527072_32	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_33	phrog_422	321.8	0	major head protein	head and packaging
UniRef90	UHGV-1527072_33	UniRef90_R5H4X0	339.0	0	Lj928 prophage protein	N/A
eggNOG-mapper	UHGV-1527072_33	1121335.Clst_0392	344.0	0	N/A	N/A
structural_annotation	UHGV-1527072_33	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_34	phrog_541	96.1	2.7e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1527072_34	663278.Ethha_0095	52.4	0.000000536	N/A	N/A
PHROG	UHGV-1527072_35	phrog_3366	85.4	6.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1527072_35	645991.Sgly_0343	75.5	0.00000000000000108	N/A	N/A
Pfam	UHGV-1527072_35	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1527072_35	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_36	phrog_556	92.1	3.8e-27	minor head protein	head and packaging
UniRef90	UHGV-1527072_36	UniRef90_D4LDZ5	91.3	3.45e-21	Minor capsid	N/A
eggNOG-mapper	UHGV-1527072_36	645991.Sgly_0344	72.0	0.0000000000000286	N/A	N/A
Pfam	UHGV-1527072_36	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1527072_36	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_37	phrog_3266	85.1	6.6e-25	tail completion	connector
eggNOG-mapper	UHGV-1527072_37	999411.HMPREF1092_03317	70.5	0.000000000000169	N/A	N/A
structural_annotation	UHGV-1527072_37	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_38	phrog_3099	54.1	0.0000000000000023	N/A	unknown function
eggNOG-mapper	UHGV-1527072_38	632245.CLP_1654	76.6	0.0000000000000501	N/A	N/A
Pfam	UHGV-1527072_38	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1527072_40	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_41	phrog_706	123.0	2.1e-36	N/A	unknown function
UniRef90	UHGV-1527072_41	UniRef90_A0A173Y9S4	129.0	2.11e-34	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1527072_41	645991.Sgly_0348	143.0	8.35006e-41	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1527072_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1527072_41	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_42	phrog_1272	195.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1527072_42	UniRef90_A0A3D4L3B5	1360.0	0	PhageMin_Tail domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1527072_42	552396.HMPREF0863_00269	202.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1527072_42	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1527072_42	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1527072_42	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1527072_42	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_43	phrog_1194	44.8	0.000000000002	N/A	unknown function
structural_annotation	UHGV-1527072_43	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_44	phrog_6616	58.6	8.5e-18	tail protein	tail
eggNOG-mapper	UHGV-1527072_44	879308.HMPREF9130_0861	65.1	0.0000000313	N/A	N/A
structural_annotation	UHGV-1527072_44	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_45	phrog_4492	65.5	4.4e-19	tail fiber protein	tail
eggNOG-mapper	UHGV-1527072_45	756499.Desde_1105	67.8	0.00000000177	N/A	N/A
structural_annotation	UHGV-1527072_45	PF03426,PF21621,NF033675,COG5156	N/A	N/A	N/A	N/A
KOfam	UHGV-1527072_47	K01447	93.2	4.1e-27	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1527072_47	phrog_9611	86.4	3.7e-25	endolysin	lysis
UniRef90	UHGV-1527072_47	UniRef90_R5GLE2	173.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1527072_47	411467.BACCAP_00101	124.0	1.14e-32	Ami_2	N/A
Pfam	UHGV-1527072_47	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1527072_47	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-1527072_47	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1527072_47	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1527072_48	phrog_13256	58.0	1.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1527072_48	641112.ACOK01000073_gene2912	61.6	0.00000000000493	N/A	N/A
UniRef90	UHGV-1527072_49	UniRef90_A0A0P9ALH5	76.6	4.02e-16	HTH IS21-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1527072_49	1203606.HMPREF1526_00394	91.3	2.22e-20	Integrase core domain	N/A
COG	UHGV-1527072_49	COG4584	N/A	N/A	Transposase	N/A
UniRef90	UHGV-1527072_50	UniRef90_A0A415DVS4	85.1	3.31e-20	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1527072_50	457421.CBFG_00370	82.0	1.9e-19	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1527072_50	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1527072_50	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1527072_50	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A