UHGV-1531211 (vOTU-033938)

Viral Genome: UHGV-1531211

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1531211
vOTU ID	vOTU-033938
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0297871
Associated BioSample	SAMEA2338786
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.26 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9798
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.97
Jumbo phage	No

Genome content
Genome length (bp)	31,730
GC content	41.23%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	92%
Average CDS length (bps)	679.19
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1531211_1	phrog_1535	479.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1531211_1	UniRef90_A0A2N0ULX3	831.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1531211_1	33035.JPJF01000093_gene2243	354.0	0	phage tail tape measure protein	N/A
COG	UHGV-1531211_1	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1531211_1	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_3	phrog_706	127.1	1.2e-37	N/A	unknown function
UniRef90	UHGV-1531211_3	UniRef90_UPI001B3C82AE	255.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1531211_3	1160721.RBI_II00530	192.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1531211_3	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1531211_3	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_4	phrog_11299	103.4	2.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1531211_4	1449050.JNLE01000003_gene3883	69.3	0.000000000000543	N/A	N/A
structural_annotation	UHGV-1531211_4	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_5	phrog_3099	145.1	3.19496e-43	N/A	unknown function
eggNOG-mapper	UHGV-1531211_5	1160721.RBI_II00532	209.0	0	N/A	N/A
structural_annotation	UHGV-1531211_5	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_6	phrog_3266	94.3	1e-27	tail completion	connector
eggNOG-mapper	UHGV-1531211_6	1449050.JNLE01000003_gene3885	140.0	5.30994e-41	N/A	N/A
structural_annotation	UHGV-1531211_6	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_7	phrog_556	118.9	1.2e-35	minor head protein	head and packaging
UniRef90	UHGV-1531211_7	UniRef90_UPI00189BC4F9	358.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1531211_7	1449050.JNLE01000003_gene3886	150.0	1.82169e-44	N/A	N/A
Pfam	UHGV-1531211_7	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1531211_7	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_8	phrog_3366	64.6	1.2e-18	N/A	unknown function
Pfam	UHGV-1531211_8	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1531211_8	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_9	phrog_541	77.8	1.2e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-1531211_9	1449050.JNLE01000003_gene3888	82.0	1.64e-18	N/A	N/A
PHROG	UHGV-1531211_10	phrog_422	234.7	0	major head protein	head and packaging
eggNOG-mapper	UHGV-1531211_10	693746.OBV_18090	387.0	0	N/A	N/A
structural_annotation	UHGV-1531211_10	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_11	phrog_194	101.5	9.8e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-1531211_11	UniRef90_UPI0018995066	343.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1531211_11	742765.HMPREF9457_02126	169.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1531211_11	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1531211_11	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_13	phrog_419	86.8	2.7e-27	N/A	unknown function
UniRef90	UHGV-1531211_13	UniRef90_UPI001E40EA70	108.0	5.79e-30	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-1531211_13	203119.Cthe_2457	101.0	8.13e-28	N/A	N/A
structural_annotation	UHGV-1531211_13	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_14	phrog_581	308.0	0	minor head protein	head and packaging
UniRef90	UHGV-1531211_14	UniRef90_UPI001897AC3D	1056.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1531211_14	658655.HMPREF0988_02563	349.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1531211_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1531211_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1531211_14	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_15	phrog_533	332.2	0	portal protein	head and packaging
UniRef90	UHGV-1531211_15	UniRef90_UPI00189C53D6	871.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1531211_15	1304866.K413DRAFT_3035	476.0	0	N/A	N/A
structural_annotation	UHGV-1531211_15	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1531211_16	K06909	76.9	2.8e-22	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1531211_16	phrog_2	86.0	6.8e-25	terminase large subunit	head and packaging
UniRef90	UHGV-1531211_16	UniRef90_UPI00189AB5B3	868.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1531211_16	1304866.K413DRAFT_3034	607.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1531211_16	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1531211_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1531211_16	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_17	phrog_309	149.3	7.00649e-45	terminase small subunit	head and packaging
UniRef90	UHGV-1531211_17	UniRef90_UPI001A9BCC34	226.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1531211_17	693746.OBV_18020	147.0	1.13505e-43	transposase activity	N/A
Pfam	UHGV-1531211_17	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-1531211_17	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1531211_17	PF07141	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1531211_18	1540257.JQMW01000004_gene433	50.8	0.0000026	N/A	N/A
structural_annotation	UHGV-1531211_18	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_20	phrog_25754	53.6	0.0000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1531211_20	97139.C824_00736	61.6	0.0000000000995	N/A	N/A
structural_annotation	UHGV-1531211_20	PF10842,MF_00436,TIGR02383	N/A	N/A	N/A	N/A
KOfam	UHGV-1531211_23	K06919	105.1	6.6e-31	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1531211_23	phrog_1829	843.7	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1531211_23	UniRef90_A0A2N0ULU7	1484.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1531211_23	1410670.JHXF01000015_gene2274	868.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1531211_23	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1531211_23	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1531211_23	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1531211_23	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1531211_23	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1531211_23	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_24	phrog_378	129.0	3.4e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1531211_24	UniRef90_A0A374ND86	279.0	0	N/A	N/A
eggNOG-mapper	UHGV-1531211_24	1410670.JHXF01000015_gene2272	164.0	0	N/A	N/A
Pfam	UHGV-1531211_24	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1531211_24	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_25	phrog_5702	73.8	6.8e-22	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1531211_25	UniRef90_A0A374N329	182.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1531211_25	1410670.JHXF01000015_gene2271	154.0	0	VRR_NUC	N/A
Pfam	UHGV-1531211_25	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1531211_25	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-1531211_26	K19789	315.4	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-1531211_26	phrog_16	274.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1531211_26	UniRef90_A0A374N1T8	833.0	0	Helicase	N/A
eggNOG-mapper	UHGV-1531211_26	1410670.JHXF01000015_gene2270	563.0	0	helicase	N/A
PADLOC	UHGV-1531211_26	mREase_IV_00005	110.5	6.5e-34	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1531211_26	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1531211_26	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1531211_26	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1531211_26	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_27	phrog_1366	227.2	0	N/A	unknown function
UniRef90	UHGV-1531211_27	UniRef90_R6S946	437.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1531211_27	1410670.JHXF01000015_gene2269	405.0	0	AAA domain	N/A
Pfam	UHGV-1531211_27	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1531211_27	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1531211_27	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_28	phrog_253	96.3	1.4e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1531211_28	UniRef90_UPI0019171ADA	189.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1531211_28	447909.A6M981_9VIRU	74.3	0.0000000000000756	Siphovirus Gp157	N/A
Pfam	UHGV-1531211_28	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1531211_28	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_29	phrog_15609	96.4	3.1e-28	N/A	unknown function
UniRef90	UHGV-1531211_29	UniRef90_A0A373SLQ6	160.0	3.20897e-43	N/A	N/A
eggNOG-mapper	UHGV-1531211_29	641112.ACOK01000073_gene2872	122.0	5.25e-30	N/A	N/A
structural_annotation	UHGV-1531211_29	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_30	phrog_8470	214.2	0	N/A	unknown function
UniRef90	UHGV-1531211_30	UniRef90_UPI0018E45158	128.0	1.67e-28	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1531211_30	641112.ACOK01000073_gene2870	108.0	1.34e-22	PcfJ-like protein	N/A
Pfam	UHGV-1531211_30	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1531211_30	PF14284	N/A	N/A	N/A	N/A
KOfam	UHGV-1531211_35	K07729	48.2	0.00000000000022	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1531211_35	phrog_3	46.9	0.0000000000011	transcriptional repressor	transcription regulation
UniRef90	UHGV-1531211_35	UniRef90_UPI001899A01A	126.0	8.52e-37	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1531211_35	459495.SPLC1_S271120	46.2	0.00000794	Helix-turn-helix domain	N/A
Pfam	UHGV-1531211_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1531211_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1531211_35	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1531211_41	K18830	58.2	2.1e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1531211_41	phrog_8	44.1	0.0000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-1531211_41	UniRef90_A0A1G5CKS8	201.0	0	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-1531211_41	537013.CLOSTMETH_02500	99.8	1.7e-25	N/A	N/A
Pfam	UHGV-1531211_41	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1531211_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1531211_41	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1531211_42	phrog_16442	136.5	1.7e-40	N/A	unknown function
UniRef90	UHGV-1531211_42	UniRef90_A0A373KW38	302.0	0	Nucleotide-binding protein	N/A
eggNOG-mapper	UHGV-1531211_42	397291.C804_06293	192.0	0	Predicted nucleotide-binding protein containing TIR-like domain	N/A
PADLOC	UHGV-1531211_42	Effector_00069	46.3	0.00000000000049	TIR	CBASS
Pfam	UHGV-1531211_42	PF10137	N/A	N/A	CAP12/Pycsar effector protein, TIR domain	CAP12-PCTIR_TIR
COG	UHGV-1531211_42	COG4271	N/A	N/A	Predicted nucleotide-binding protein containing TIR -like domain	N/A
structural_annotation	UHGV-1531211_42	PF10137,COG4271	N/A	N/A	N/A	N/A
KOfam	UHGV-1531211_43	K14059	206.0	0	int; integrase	N/A
PHROG	UHGV-1531211_43	phrog_1	204.5	0	integrase	integration and excision
UniRef90	UHGV-1531211_43	UniRef90_UPI001899FB9B	743.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1531211_43	1507.HMPREF0262_00307	193.0	0	Phage integrase family	N/A
Pfam	UHGV-1531211_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1531211_43	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1531211_43	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A