UHGV-1535585 (vOTU-061987)

Viral Genome: UHGV-1535585

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1535585
vOTU ID	vOTU-061987
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0267831
Associated BioSample	SAMEA2738022
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.34 (High-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.64
Jumbo phage	No

Genome content
Genome length (bp)	31,143
GC content	41.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	94%
Average CDS length (bps)	599.82
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.34)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1535585_3	K07273	161.1	0	acm; lysozyme	N/A
PHROG	UHGV-1535585_3	phrog_291	141.4	7.19987e-42	endolysin	lysis
UniRef90	UHGV-1535585_3	UniRef90_A0A8D9UIP9	216.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1535585_3	938289.CAJN020000007_gene311	185.0	0	Pfam:Cpl-7	N/A
Pfam	UHGV-1535585_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1535585_3	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1535585_3	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_4	phrog_443	58.8	1.6e-16	holin	lysis
UniRef90	UHGV-1535585_4	UniRef90_UPI00067E9ED8	92.8	2.39e-23	holin	N/A
eggNOG-mapper	UHGV-1535585_4	1235797.C816_04172	82.0	6.34e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1535585_4	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1535585_4	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_5	phrog_4105	87.8	9.3e-26	N/A	unknown function
UniRef90	UHGV-1535585_5	UniRef90_A0A8D9UHA9	94.0	5.81e-23	Holin protein	N/A
eggNOG-mapper	UHGV-1535585_5	1321782.HMPREF1986_02281	64.3	0.00000000000838	N/A	N/A
Pfam	UHGV-1535585_6	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1535585_6	PF11314,PF14600,PF02839	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_7	phrog_372	223.9	0	tail protein	tail
UniRef90	UHGV-1535585_7	UniRef90_UPI001EE154D9	217.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535585_7	658659.HMPREF0983_03294	136.0	3.74e-32	N/A	N/A
Pfam	UHGV-1535585_7	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1535585_7	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1535585_7	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_8	phrog_9680	163.2	0	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1535585_8	UniRef90_UPI0018E9B800	501.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1535585_8	1282664.H354_06721	501.0	0	outer membrane autotransporter barrel domain protein	N/A
COG	UHGV-1535585_8	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
PHROG	UHGV-1535585_9	phrog_1194	69.7	2.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-1535585_9	1282664.H354_06716	134.0	1.69e-39	N/A	N/A
structural_annotation	UHGV-1535585_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_10	phrog_1535	432.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1535585_10	UniRef90_A0A139R8H3	639.0	0	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1535585_10	1282664.H354_06711	632.0	0	Phage-related minor tail protein	N/A
COG	UHGV-1535585_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1535585_10	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_11	phrog_8355	102.3	1.6e-30	N/A	unknown function
UniRef90	UHGV-1535585_11	UniRef90_UPI001924D062	112.0	8.71e-31	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1535585_11	1282664.H354_06706	117.0	9.93e-34	N/A	N/A
PHROG	UHGV-1535585_12	phrog_8300	98.1	5.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1535585_12	33035.JPJF01000093_gene2245	98.6	1.12e-25	N/A	N/A
structural_annotation	UHGV-1535585_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_14	phrog_820	118.1	5.1e-35	major tail protein	tail
eggNOG-mapper	UHGV-1535585_14	1282664.H354_06691	235.0	0	N/A	N/A
structural_annotation	UHGV-1535585_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_15	phrog_2595	81.0	1.2e-23	head-tail connector protein	connector
UniRef90	UHGV-1535585_15	UniRef90_UPI001D0627B3	119.0	3.86e-32	minor capsid protein	N/A
eggNOG-mapper	UHGV-1535585_15	1282664.H354_06686	173.0	0	N/A	N/A
Pfam	UHGV-1535585_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1535585_15	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_16	phrog_556	48.7	0.00000000000012	minor head protein	head and packaging
eggNOG-mapper	UHGV-1535585_16	742740.HMPREF9474_03509	147.0	5.60519e-44	N/A	N/A
PHROG	UHGV-1535585_17	phrog_8710	128.4	2.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-1535585_17	33035.JPJF01000093_gene2249	138.0	3.69999e-41	N/A	N/A
structural_annotation	UHGV-1535585_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_18	phrog_541	89.5	3e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-1535585_18	483218.BACPEC_01153	149.0	8.40779e-45	N/A	N/A
PHROG	UHGV-1535585_19	phrog_1378	53.4	0.0000000000000039	N/A	unknown function
eggNOG-mapper	UHGV-1535585_19	1391647.AVSV01000003_gene1809	50.1	0.000000697	N/A	N/A
PHROG	UHGV-1535585_20	phrog_422	347.9	0	major head protein	head and packaging
UniRef90	UHGV-1535585_20	UniRef90_UPI00115A6E07	437.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1535585_20	394503.Ccel_3291	434.0	0	N/A	N/A
structural_annotation	UHGV-1535585_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_21	phrog_2303	124.7	8.3e-37	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1535585_21	1282664.H354_06656	154.0	1.26117e-44	N/A	N/A
PHROG	UHGV-1535585_22	phrog_918	96.3	1.6e-28	N/A	unknown function
UniRef90	UHGV-1535585_22	UniRef90_UPI001C1095C9	131.0	6.94e-38	N/A	N/A
eggNOG-mapper	UHGV-1535585_22	1140001.I571_01827	83.6	6.75e-20	N/A	N/A
Pfam	UHGV-1535585_22	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1535585_22	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_23	phrog_774	60.3	3.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-1535585_23	397290.C810_05225	75.9	1.49e-16	N/A	N/A
PHROG	UHGV-1535585_25	phrog_581	235.8	0	minor head protein	head and packaging
UniRef90	UHGV-1535585_25	UniRef90_A0A413WRQ0	417.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1535585_25	1282664.H354_06636	374.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1535585_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1535585_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_26	phrog_25639	69.2	4.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1535585_26	1282664.H354_06631	80.1	3.64e-19	N/A	N/A
PHROG	UHGV-1535585_27	phrog_533	271.3	0	portal protein	head and packaging
UniRef90	UHGV-1535585_27	UniRef90_A0A6I3IQZ0	665.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1535585_27	1282664.H354_06626	621.0	0	N/A	N/A
structural_annotation	UHGV-1535585_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1535585_28	K06909	86.8	2.9e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1535585_28	phrog_2	78.2	1.5e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1535585_28	UniRef90_A0A139R8G3	660.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1535585_28	1282664.H354_06621	660.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1535585_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1535585_28	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_29	phrog_309	191.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-1535585_29	UniRef90_A0A6N9QIP1	187.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1535585_29	1121091.AUMP01000003_gene2580	172.0	0	transposase activity	N/A
COG	UHGV-1535585_29	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1535585_29	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-1535585_30	K00571	138.7	5.40004e-41	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1535585_30	phrog_498	509.3	0	DNA methyltransferase	other
UniRef90	UHGV-1535585_30	UniRef90_M3H1L0	436.0	0	Phage DNA methylase	N/A
eggNOG-mapper	UHGV-1535585_30	1487921.DP68_11275	420.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1535585_30	MTase_II_00015	468.9	0	Type II methyltransferase	RM
Pfam	UHGV-1535585_30	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1535585_30	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1535585_30	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1535585_30	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_31	phrog_11237	85.4	6.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-1535585_31	875454.BAEW01000017_gene1604	117.0	3.06e-32	N/A	N/A
structural_annotation	UHGV-1535585_31	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_32	phrog_3584	163.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1535585_32	936375.HMPREF1152_0670	225.0	0	N/A	N/A
structural_annotation	UHGV-1535585_32	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_33	phrog_25385	54.1	0.0000000000000024	N/A	unknown function
eggNOG-mapper	UHGV-1535585_33	411468.CLOSCI_00565	59.7	0.000000000488	N/A	N/A
PHROG	UHGV-1535585_34	phrog_5781	68.2	1.2e-19	N/A	unknown function
UniRef90	UHGV-1535585_34	UniRef90_A0A7G5NUL0	79.0	5.03e-17	N/A	N/A
eggNOG-mapper	UHGV-1535585_34	573061.Clocel_3558	76.6	1.07e-16	N/A	N/A
Pfam	UHGV-1535585_34	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1535585_34	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1535585_34	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_36	phrog_3782	108.8	8.4e-33	N/A	unknown function
UniRef90	UHGV-1535585_36	UniRef90_UPI00189B2E5B	87.0	2.74e-18	YopX family protein	N/A
eggNOG-mapper	UHGV-1535585_36	476272.RUMHYD_01460	103.0	4.18e-26	N/A	N/A
Pfam	UHGV-1535585_36	PF09643	N/A	N/A	YopX protein	YopX
Pfam	UHGV-1535585_36	PF14192	N/A	N/A	N/A	DUF4314
NCBIFam	UHGV-1535585_36	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
COG	UHGV-1535585_36	COG2105	N/A	N/A	Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family	N/A
UniRef90	UHGV-1535585_38	UniRef90_UPI000403EAB4	56.2	0.0000000562	N/A	N/A
KOfam	UHGV-1535585_39	K00390	101.3	9.3e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1535585_39	phrog_424	123.4	1.8e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1535585_39	UniRef90_UPI0019CFB3D8	345.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1535585_39	742733.HMPREF9469_00225	264.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-1535585_39	BrxP_00001	59.9	3.3e-17	BrxP	BREX
Pfam	UHGV-1535585_39	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1535585_39	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1535585_39	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1535585_41	K06223	217.4	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1535585_41	phrog_56	191.6	0	DNA methyltransferase	other
UniRef90	UHGV-1535585_41	UniRef90_A0A2S0L5T4	367.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1535585_41	1321814.HMPREF9089_00914	363.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1535585_41	MTase_II_00030	251.0	0	Type II methyltransferase	RM
Pfam	UHGV-1535585_41	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1535585_41	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1535585_41	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_42	phrog_25754	62.6	3.6e-18	N/A	unknown function
structural_annotation	UHGV-1535585_42	PF18195,MF_00257,NF041655,COG1923	N/A	N/A	N/A	N/A
KOfam	UHGV-1535585_45	K03111	95.8	7.4e-28	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1535585_45	phrog_44	102.2	6.1e-30	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535585_45	UniRef90_W2BYN3	126.0	3.11e-35	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1535585_45	883109.HMPREF0380_00268	127.0	2.67e-36	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1535585_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1535585_45	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1535585_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1535585_45	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1535585_45	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1535585_46	phrog_7566	66.1	4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1535585_46	665950.HMPREF1025_02547	49.7	0.0000067	N/A	N/A
KOfam	UHGV-1535585_49	K08309	57.4	2.8e-16	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-1535585_49	phrog_19890	103.3	2e-30	N/A	unknown function
UniRef90	UHGV-1535585_49	UniRef90_R6ETT3	105.0	2.77e-25	Transglycosylase SLT domain protein	N/A
eggNOG-mapper	UHGV-1535585_49	411468.CLOSCI_01470	100.0	1.7e-23	Transglycosylase SLT domain	N/A
Pfam	UHGV-1535585_49	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1535585_49	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1535585_49	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A