UHGV-1537359 (vOTU-146882)

Viral Genome: UHGV-1537359

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1537359
vOTU ID	vOTU-146882
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0304681
Associated BioSample	SAMEA3664838
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.79 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	24
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	51.3
Jumbo phage	No

Genome content
Genome length (bp)	30,305
GC content	38.05%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	92%
Average CDS length (bps)	649.47
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1537359_1	633147.Olsu_1237	53.9	0.0000000051	N/A	N/A
PHROG	UHGV-1537359_2	phrog_21357	122.1	1.2e-36	endolysin	lysis
UniRef90	UHGV-1537359_2	UniRef90_UPI001C37F582	454.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1537359_2	243164.DET1070	234.0	0	SMART Glycoside hydrolase, family 25 subgroup	N/A
Pfam	UHGV-1537359_2	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1537359_2	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1537359_2	PF08460,PF10030,TIGR02594,NF041850,COG4322,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_3	phrog_918	112.1	2e-33	N/A	unknown function
UniRef90	UHGV-1537359_3	UniRef90_UPI001F22DD3C	108.0	3.36e-29	N/A	N/A
eggNOG-mapper	UHGV-1537359_3	1499683.CCFF01000014_gene3910	105.0	6.57e-29	N/A	N/A
Pfam	UHGV-1537359_3	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1537359_3	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_4	phrog_199	60.9	1.4e-17	holin	lysis
UniRef90	UHGV-1537359_4	UniRef90_E2NU60	284.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1537359_4	742723.HMPREF9477_00889	193.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1537359_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1537359_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1537359_4	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1537359_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_5	phrog_372	217.5	0	tail protein	tail
UniRef90	UHGV-1537359_5	UniRef90_UPI0006C32325	1044.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537359_5	1211844.CBLM010000016_gene1479	202.0	0	N/A	N/A
Pfam	UHGV-1537359_5	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1537359_5	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_6	phrog_18110	43.0	0.0000000000044	N/A	unknown function
eggNOG-mapper	UHGV-1537359_6	411465.PEPMIC_00746	75.5	0.00000000000104	Prophage endopeptidase tail	N/A
COG	UHGV-1537359_6	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1537359_7	phrog_30133	115.8	3.7e-34	virion structural protein	head and packaging
UniRef90	UHGV-1537359_7	UniRef90_I7ARM6	298.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537359_7	1504823.CCMM01000008_gene1029	317.0	0	N/A	N/A
structural_annotation	UHGV-1537359_7	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_8	phrog_15074	53.3	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-1537359_8	445974.CLORAM_02919	483.0	0	cellulase activity	N/A
COG	UHGV-1537359_8	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1537359_8	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_9	phrog_1194	84.7	8.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1537359_9	1504823.CCMM01000008_gene1031	187.0	0	N/A	N/A
Pfam	UHGV-1537359_9	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1537359_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_10	phrog_1535	319.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1537359_10	UniRef90_A0A6N9L4U2	1474.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1537359_10	650150.ERH_0621	342.0	0	tape measure	N/A
Pfam	UHGV-1537359_10	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1537359_10	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1537359_10	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1537359_11	phrog_183	59.2	7.3e-17	tail chaperone protein	tail
UniRef90	UHGV-1537359_11	UniRef90_UPI0011C9B36A	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537359_11	445974.CLORAM_02923	119.0	4.04e-33	N/A	N/A
Pfam	UHGV-1537359_11	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1537359_11	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_12	phrog_158	70.8	2.7e-20	major tail protein	tail
UniRef90	UHGV-1537359_12	UniRef90_A0A6N9L2K6	266.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1537359_12	445974.CLORAM_02924	172.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1537359_12	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1537359_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_13	phrog_78	60.1	4.2e-17	tail terminator	connector
eggNOG-mapper	UHGV-1537359_13	1504823.CCMM01000008_gene1036	142.0	1.5106e-42	N/A	N/A
structural_annotation	UHGV-1537359_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_14	phrog_5	72.6	6.6e-21	tail completion or Neck1 protein	connector
UniRef90	UHGV-1537359_14	UniRef90_A0A6N9L3B6	343.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1537359_14	742733.HMPREF9469_01819	155.0	1.4013e-45	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1537359_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1537359_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1537359_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_15	phrog_2168	92.1	4.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-1537359_15	1280689.AUJC01000003_gene969	79.3	8.86e-18	N/A	N/A
structural_annotation	UHGV-1537359_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_16	phrog_132	42.1	0.000000000013	head-tail adaptor	connector
UniRef90	UHGV-1537359_16	UniRef90_UPI001C101B39	54.3	0.000000262	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1537359_16	1235800.C819_00483	56.6	0.00000000811	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1537359_16	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1537359_16	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_17	phrog_2724	60.3	3.7e-17	N/A	unknown function
UniRef90	UHGV-1537359_17	UniRef90_A0A6N9L4P9	156.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-1537359_17	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1537359_17	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1537359_17	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_18	phrog_422	298.8	0	major head protein	head and packaging
UniRef90	UHGV-1537359_18	UniRef90_A0A2H4JCM6	300.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1537359_18	1211844.CBLM010000016_gene1491	308.0	0	N/A	N/A
structural_annotation	UHGV-1537359_18	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_19	phrog_172	159.0	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1537359_19	UniRef90_A0A6N9L4V5	298.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537359_19	1211844.CBLM010000016_gene1492	107.0	1.77e-26	N/A	N/A
Pfam	UHGV-1537359_19	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1537359_19	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_20	phrog_30609	66.3	5e-19	N/A	unknown function
structural_annotation	UHGV-1537359_20	PF21485	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_21	phrog_3675	114.1	5.1e-34	N/A	unknown function
UniRef90	UHGV-1537359_21	UniRef90_A0A0E4H649	119.0	1.26e-32	YjcQ protein	N/A
eggNOG-mapper	UHGV-1537359_21	1120978.KB894082_gene1061	141.0	3.07024e-42	YjcQ protein	N/A
Pfam	UHGV-1537359_21	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1537359_21	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_23	phrog_115	337.3	0	minor head protein	head and packaging
UniRef90	UHGV-1537359_23	UniRef90_A0A6N9L4X5	1001.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1537359_23	1211844.CBLM010000016_gene1495	402.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1537359_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1537359_23	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1537359_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1537359_23	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_24	phrog_64	390.4	0	portal protein	head and packaging
UniRef90	UHGV-1537359_24	UniRef90_A0A6N9L3D6	896.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1537359_24	445974.CLORAM_02935	478.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1537359_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1537359_24	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1537359_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1537359_25	K06909	363.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1537359_25	phrog_3717	167.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1537359_25	UniRef90_A0A6N9L4W9	796.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1537359_25	445974.CLORAM_02936	736.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1537359_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1537359_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1537359_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1537359_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1537359_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_26	phrog_2412	85.0	8e-25	N/A	unknown function
UniRef90	UHGV-1537359_26	UniRef90_UPI001C38E948	225.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-1537359_26	1125712.HMPREF1316_1524	64.3	0.0000000000178	N/A	N/A
Pfam	UHGV-1537359_26	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
structural_annotation	UHGV-1537359_26	PF18932	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_28	phrog_5234	53.3	0.0000000000000043	N/A	unknown function
UniRef90	UHGV-1537359_28	UniRef90_A0A6L5T9Q6	179.0	0	Gln_amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1537359_28	78345.BMERY_0883	74.7	0.000000000000793	N/A	N/A
Pfam	UHGV-1537359_28	PF15644	N/A	N/A	Papain fold toxin 1, glutamine deamidase	Gln_amidase
structural_annotation	UHGV-1537359_28	PF15644,NF011786	N/A	N/A	N/A	N/A
KOfam	UHGV-1537359_29	K03497	58.4	1.5e-16	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1537359_29	phrog_940	391.1	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537359_29	UniRef90_R6DKE7	438.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1537359_29	1232449.BAHV02000018_gene1534	415.0	0	N/A	N/A
PADLOC	UHGV-1537359_29	MTase_II_00015	90.9	2e-26	Type II methyltransferase	RM
Pfam	UHGV-1537359_29	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1537359_29	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1537359_29	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1537359_29	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_30	phrog_36	46.6	0.00000000000068	transcriptional regulator	transcription regulation
COG	UHGV-1537359_30	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
PHROG	UHGV-1537359_32	phrog_190	135.3	3.60001e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537359_32	UniRef90_UPI0006C03F37	221.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537359_32	862517.HMPREF9225_1657	100.0	5.67e-26	N/A	N/A
Pfam	UHGV-1537359_32	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1537359_32	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1537359_33	K03111	146.9	2.00386e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1537359_33	phrog_44	152.8	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537359_33	UniRef90_A0A6N9L4V1	275.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1537359_33	1232446.BAIE02000064_gene3707	157.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1537359_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1537359_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1537359_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1537359_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1537359_33	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_37	phrog_4856	66.0	6.2e-19	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1537359_37	UniRef90_E2NR83	80.9	3.27e-17	MazG domain-containing protein	N/A
Pfam	UHGV-1537359_37	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-1537359_37	NF001613,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_39	phrog_22292	84.1	1.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-1537359_39	1232446.BAIE02000041_gene2433	56.2	0.0000000857	N/A	N/A
KOfam	UHGV-1537359_40	K00571	118.3	9e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1537359_40	phrog_67	105.9	2.7e-31	DNA methyltransferase	other
UniRef90	UHGV-1537359_40	UniRef90_UPI001D09885E	485.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1537359_40	411468.CLOSCI_00299	474.0	0	DNA methylase	N/A
PADLOC	UHGV-1537359_40	MTase_II_00157	95.4	8.7e-28	Type II methyltransferase	RM
Pfam	UHGV-1537359_40	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1537359_40	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1537359_40	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1537359_42	phrog_2514	65.6	8.2e-19	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537359_42	UniRef90_UPI001C395B09	228.0	0	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1537359_42	1140002.I570_01458	61.2	0.000000031	DnaD domain protein	N/A
COG	UHGV-1537359_42	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1537359_42	PF09681,NF033788,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-1537359_43	K07455	202.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1537359_43	phrog_148	223.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537359_43	UniRef90_A0A6N9L4X4	577.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1537359_43	1095750.HMPREF9970_1675	362.0	0	RecT family	N/A
Pfam	UHGV-1537359_43	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1537359_43	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1537359_43	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1537359_43	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A