UHGV-1538051 (vOTU-072314)

Viral Genome: UHGV-1538051

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1538051
vOTU ID	vOTU-072314
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0263659
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.61 (High-quality)
Trimmed provirus	No
CheckV viral markers	26
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9768
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	72.61
Jumbo phage	No

Genome content
Genome length (bp)	34,384
GC content	39.22%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	93%
Average CDS length (bps)	530.25
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.61)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1538051_1	K14059	196.4	0	int; integrase	N/A
PHROG	UHGV-1538051_1	phrog_1	208.3	0	integrase	integration and excision
UniRef90	UHGV-1538051_1	UniRef90_UPI00041838CC	326.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1538051_1	1123263.AUKY01000012_gene1957	326.0	0	Pfam:Integrase_AP2	N/A
Pfam	UHGV-1538051_1	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1538051_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1538051_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1538051_1	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1538051_2	K18830	46.0	0.0000000000013	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1538051_2	phrog_8	47.1	0.00000000000054	transcriptional regulator	transcription regulation
UniRef90	UHGV-1538051_2	UniRef90_UPI000CF84712	70.5	0.0000000000000227	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1538051_2	1405498.SSIM_05045	51.6	0.000000239	Transcriptional	N/A
PADLOC	UHGV-1538051_2	retron_type_VI_hth_cluster2_1	41.0	0.000000000056	N/A	Retron
Pfam	UHGV-1538051_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1538051_2	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-1538051_4	K07741	125.4	1e-36	antB; anti-repressor protein	N/A
PHROG	UHGV-1538051_4	phrog_130	261.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1538051_4	UniRef90_A0A1E9PGC1	372.0	0	Antirepressor	N/A
eggNOG-mapper	UHGV-1538051_4	508419.F8J196_9CAUD	320.0	0	DNA binding	N/A
Pfam	UHGV-1538051_4	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1538051_4	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-1538051_4	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1538051_6	742765.HMPREF9457_02102	50.4	0.000000192	N/A	N/A
PHROG	UHGV-1538051_12	phrog_253	124.0	1e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538051_12	UniRef90_UPI001C017BAC	70.9	0.00000000000196	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1538051_12	742823.HMPREF9465_00905	56.6	0.0000000766	Siphovirus Gp157	N/A
Pfam	UHGV-1538051_12	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1538051_12	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_13	phrog_2872	252.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538051_13	UniRef90_UPI001A9B3ECC	233.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1538051_13	754027.HMPREF9554_00709	219.0	0	N/A	N/A
Pfam	UHGV-1538051_13	PF13479	N/A	N/A	AAA domain	AAA_24
PHROG	UHGV-1538051_14	phrog_2698	121.7	4.1e-36	N/A	unknown function
UniRef90	UHGV-1538051_14	UniRef90_UPI00148D30D4	86.7	2.55e-18	N/A	N/A
eggNOG-mapper	UHGV-1538051_14	1232449.BAHV02000010_gene2698	82.4	4.34e-18	N/A	N/A
KOfam	UHGV-1538051_15	K01160	46.6	0.00000000000086	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1538051_15	phrog_140	142.3	2.10055e-42	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538051_15	UniRef90_UPI000CF97872	156.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1538051_15	1123263.AUKY01000072_gene2102	122.0	7.71e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1538051_15	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1538051_15	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1538051_15	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1538051_16	K07505	224.6	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1538051_16	phrog_2597	733.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538051_16	UniRef90_UPI000404F782	546.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1538051_16	1123263.AUKY01000015_gene1593	546.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1538051_16	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1538051_16	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1538051_16	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1538051_16	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_19	phrog_803	53.6	0.0000000000000045	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1538051_19	UniRef90_UPI001039D6AD	58.2	0.00000000058	integrase	N/A
eggNOG-mapper	UHGV-1538051_19	1002809.SSIL_1411	64.3	0.00000000000043	N/A	N/A
PHROG	UHGV-1538051_21	phrog_478	101.2	7.1e-30	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1538051_21	UniRef90_A0A0J8Z1B9	165.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-1538051_21	272623.L62008	80.9	9.95e-18	N/A	N/A
PHROG	UHGV-1538051_24	phrog_36	62.3	1.1e-17	transcriptional regulator	transcription regulation
structural_annotation	UHGV-1538051_24	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_26	phrog_3996	70.5	1.6e-20	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1538051_26	UniRef90_A0A7X2TEK2	82.4	2.1e-17	N/A	N/A
eggNOG-mapper	UHGV-1538051_26	679200.HMPREF9333_00312	52.8	0.00000111	N/A	N/A
Pfam	UHGV-1538051_26	PF10097	N/A	N/A	N/A	DUF2335
COG	UHGV-1538051_26	COG5346	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538051_26	PF10097,COG5346	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1538051_28	1504823.CCMM01000008_gene725	65.5	0.000000000000159	N/A	N/A
structural_annotation	UHGV-1538051_28	PF09274,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_29	phrog_338	100.8	1.6e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538051_29	UniRef90_E7MP00	171.0	0	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-1538051_29	706433.HMPREF9430_01271	171.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-1538051_29	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1538051_29	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1538051_29	PF01844	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_30	phrog_104	254.3	0	portal protein	head and packaging
UniRef90	UHGV-1538051_30	UniRef90_A0A890GW77	526.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1538051_30	706433.HMPREF9430_01270	506.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1538051_30	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_31	phrog_2494	49.5	0.00000000000005	minor head protein	head and packaging
eggNOG-mapper	UHGV-1538051_31	1042156.CXIVA_01840	74.7	0.0000000000121	Phage Mu protein F like protein	N/A
Pfam	UHGV-1538051_31	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-1538051_31	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_32	phrog_3675	106.6	1.1e-31	N/A	unknown function
UniRef90	UHGV-1538051_32	UniRef90_U2JT34	116.0	2.07e-31	YjcQ protein	N/A
eggNOG-mapper	UHGV-1538051_32	665950.HMPREF1025_02533	131.0	3.72e-38	YjcQ protein	N/A
Pfam	UHGV-1538051_32	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1538051_32	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_33	phrog_17688	345.2	0	N/A	unknown function
UniRef90	UHGV-1538051_33	UniRef90_E7MNZ6	673.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1538051_33	706433.HMPREF9430_01267	673.0	0	phage terminase, large subunit	N/A
COG	UHGV-1538051_33	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1538051_33	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_34	phrog_233	89.9	6e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-1538051_34	UniRef90_A0A890GYE3	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-1538051_34	706433.HMPREF9430_01266	173.0	0	N/A	N/A
Pfam	UHGV-1538051_34	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1538051_34	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_35	phrog_32396	129.3	1e-38	N/A	unknown function
UniRef90	UHGV-1538051_35	UniRef90_A0A7X2NQN8	431.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1538051_35	706433.HMPREF9430_01265	442.0	0	Phage capsid family	N/A
Pfam	UHGV-1538051_35	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1538051_35	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1538051_35	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_37	phrog_137	78.6	5.8e-23	head-tail adaptor Ad1	connector
UniRef90	UHGV-1538051_37	UniRef90_UPI000C83D02F	134.0	8.9e-38	phage Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-1538051_37	706433.HMPREF9430_01264	132.0	6.74e-38	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1538051_37	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1538051_37	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_38	phrog_501	93.0	2.5e-27	head closure Hc1	connector
UniRef90	UHGV-1538051_38	UniRef90_A0A139QHM6	140.0	6.89004e-41	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1538051_38	157924.Q7Y4I1_9CAUD	136.0	5.29e-40	N/A	N/A
structural_annotation	UHGV-1538051_38	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_39	phrog_387	80.5	1.5e-23	neck protein	connector
UniRef90	UHGV-1538051_39	UniRef90_A0A0E4H9B2	52.0	0.000000691	N/A	N/A
eggNOG-mapper	UHGV-1538051_39	1289597.M1PKU8_9CAUD	59.7	0.000000000112	N/A	N/A
PHROG	UHGV-1538051_40	phrog_123	73.1	4.3e-21	tail terminator	connector
UniRef90	UHGV-1538051_40	UniRef90_A0A2A5RIK6	116.0	1.9e-31	N/A	N/A
eggNOG-mapper	UHGV-1538051_40	875454.BAEW01000017_gene1591	129.0	1.47e-37	N/A	N/A
structural_annotation	UHGV-1538051_40	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_41	phrog_117	141.2	5.5001e-42	major tail protein	tail
UniRef90	UHGV-1538051_41	UniRef90_A0A3E5D5Z0	202.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1538051_41	1121864.OMO_02158	201.0	0	domain, Protein	N/A
COG	UHGV-1538051_41	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538051_41	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_42	phrog_1526	52.7	0.0000000000000073	N/A	unknown function
PHROG	UHGV-1538051_43	phrog_1633	113.4	1.4e-33	N/A	unknown function
UniRef90	UHGV-1538051_43	UniRef90_UPI001389891D	104.0	1.73e-26	N/A	N/A
eggNOG-mapper	UHGV-1538051_43	157924.Q9F4J4_9CAUD	94.4	3.33e-23	N/A	N/A
structural_annotation	UHGV-1538051_43	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_44	phrog_6900	243.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1538051_44	UniRef90_A0A1C6EH41	314.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1538051_44	12390.Q77MU4_9CAUD	278.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1538051_44	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_45	phrog_33	61.2	2.9e-17	distal tail protein Dit	tail
UniRef90	UHGV-1538051_45	UniRef90_A0A2X2UUQ3	143.0	1.51e-38	Phage putative tail component	N/A
eggNOG-mapper	UHGV-1538051_45	1123263.AUKY01000068_gene490	219.0	0	tail component	N/A
COG	UHGV-1538051_45	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1538051_45	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_46	phrog_1067	308.1	0	minor head protein	head and packaging
UniRef90	UHGV-1538051_46	UniRef90_A0A890GYC9	428.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1538051_46	1123263.AUKY01000068_gene489	407.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1538051_46	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1538051_46	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1538051_46	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1538051_46	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1538051_46	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1538051_49	411470.RUMGNA_00117	105.0	1.25e-22	N/A	N/A
COG	UHGV-1538051_49	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1538051_49	PF03422,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_50	phrog_372	237.9	0	tail protein	tail
UniRef90	UHGV-1538051_50	UniRef90_UPI0009E1EED3	169.0	1.02001e-41	N/A	N/A
eggNOG-mapper	UHGV-1538051_50	556261.HMPREF0240_01282	157.0	2.98e-38	N/A	N/A
Pfam	UHGV-1538051_50	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1538051_50	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1538051_50	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538051_51	PF10618	N/A	N/A	N/A	N/A
Pfam	UHGV-1538051_52	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1538051_52	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_53	phrog_15594	72.7	4.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-1538051_53	1118055.CAGU01000013_gene763	51.6	0.000000346	N/A	N/A
structural_annotation	UHGV-1538051_53	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-1538051_54	phrog_31538	56.1	6.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1538051_54	411460.RUMTOR_01351	54.3	0.000000109	N/A	N/A
PHROG	UHGV-1538051_55	phrog_13589	174.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1538051_55	411460.RUMTOR_01324	228.0	0	N/A	N/A
UniRef90	UHGV-1538051_56	UniRef90_A0A3A9J0J9	56.2	0.0000000085	Histidine kinase	N/A
eggNOG-mapper	UHGV-1538051_56	742733.HMPREF9469_05009	58.5	0.00000000149	N/A	N/A
structural_annotation	UHGV-1538051_57	PF20328,NF033679,COG4935	N/A	N/A	N/A	N/A
KOfam	UHGV-1538051_58	K07273	183.7	0	acm; lysozyme	N/A
PHROG	UHGV-1538051_58	phrog_291	202.0	0	endolysin	lysis
UniRef90	UHGV-1538051_58	UniRef90_UPI001D017004	293.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1538051_58	1235798.C817_00299	249.0	0	family 25	N/A
Pfam	UHGV-1538051_58	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1538051_58	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-1538051_58	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1538051_58	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1538051_58	PF01183,COG3757	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1538051_59	445971.ANASTE_00732	60.8	0.000000000172	N/A	N/A
PHROG	UHGV-1538051_60	phrog_33625	76.7	1.6e-22	holin	lysis
UniRef90	UHGV-1538051_60	UniRef90_UPI00137381C3	138.0	4.86993e-41	phage holin	N/A
eggNOG-mapper	UHGV-1538051_60	1385512.N784_12970	117.0	2.36e-33	Bacteriophage holin	N/A
Pfam	UHGV-1538051_60	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1538051_60	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1538051_60	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538051_60	COG5546	N/A	N/A	N/A	N/A