UHGV-1539386 (vOTU-027623)

Viral Genome: UHGV-1539386

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1539386
vOTU ID	vOTU-027623
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0197485
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.86 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.39
Jumbo phage	No

Genome content
Genome length (bp)	20,944
GC content	39.57%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	27
CDS density	90%
Average CDS length (bps)	701.22
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1539386_2	UniRef90_A0A6M0R6D7	86.7	1.47e-17	Alginate lyase	N/A
eggNOG-mapper	UHGV-1539386_2	1121334.KB911073_gene1922	123.0	6.53e-33	N/A	N/A
KOfam	UHGV-1539386_3	K01449	97.6	1.6e-28	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
UniRef90	UHGV-1539386_3	UniRef90_R6N972	308.0	0	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1539386_3	428125.CLOLEP_03843	210.0	0	cell wall hydrolase	N/A
Pfam	UHGV-1539386_3	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-1539386_3	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
PHROG	UHGV-1539386_4	phrog_199	74.7	1.1e-21	holin	lysis
UniRef90	UHGV-1539386_4	UniRef90_UPI00164BAF69	202.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1539386_4	1160721.RBI_I01565	158.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1539386_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1539386_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1539386_4	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1539386_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_5	phrog_774	62.7	7.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1539386_5	397290.C810_05225	117.0	2.81e-33	N/A	N/A
PHROG	UHGV-1539386_6	phrog_918	114.5	3.5e-34	N/A	unknown function
UniRef90	UHGV-1539386_6	UniRef90_UPI00164AB9AF	124.0	3.1e-35	N/A	N/A
eggNOG-mapper	UHGV-1539386_6	1504823.CCMM01000008_gene1021	116.0	4.47e-33	N/A	N/A
Pfam	UHGV-1539386_6	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1539386_6	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-1539386_7	K01447	118.2	9.3e-35	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1539386_7	phrog_833	188.2	0	endolysin	lysis
UniRef90	UHGV-1539386_7	UniRef90_R6MSP5	635.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1539386_7	428125.CLOLEP_01782	187.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1539386_7	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1539386_7	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1539386_7	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-1539386_9	UniRef90_A0A1C6HHE5	111.0	5.37e-25	BppU_N domain-containing protein	N/A
structural_annotation	UHGV-1539386_9	PF01664	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_10	phrog_18190	92.0	1.7e-30	N/A	unknown function
structural_annotation	UHGV-1539386_10	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_11	phrog_1194	61.8	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1539386_11	397290.C810_05238	95.1	3.61e-23	N/A	N/A
Pfam	UHGV-1539386_11	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1539386_11	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_12	phrog_1535	434.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1539386_12	UniRef90_A0A2N0ULX3	1167.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1539386_12	33035.JPJF01000093_gene2243	359.0	0	phage tail tape measure protein	N/A
COG	UHGV-1539386_12	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1539386_12	PF20155,COG3941	N/A	N/A	N/A	N/A
KOfam	UHGV-1539386_13	K07741	86.5	7.4e-25	antB; anti-repressor protein	N/A
PHROG	UHGV-1539386_13	phrog_130	241.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1539386_13	UniRef90_UPI00085BF623	349.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1539386_13	1289596.M1PKL6_9CAUD	335.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1539386_13	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1539386_13	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-1539386_13	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1539386_16	UniRef90_A0A174ZSI5	87.8	7.71e-18	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1539386_16	411902.CLOBOL_02557	89.0	5.27e-18	N/A	N/A
PHROG	UHGV-1539386_17	phrog_706	129.5	2.3e-38	N/A	unknown function
UniRef90	UHGV-1539386_17	UniRef90_UPI001B3C82AE	253.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1539386_17	1160721.RBI_II00530	191.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1539386_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1539386_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_18	phrog_11299	101.0	1.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1539386_18	1449050.JNLE01000003_gene3883	66.6	0.00000000000591	N/A	N/A
structural_annotation	UHGV-1539386_18	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_19	phrog_3099	145.7	2.10195e-43	N/A	unknown function
eggNOG-mapper	UHGV-1539386_19	1160721.RBI_II00532	231.0	0	N/A	N/A
structural_annotation	UHGV-1539386_19	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_20	phrog_3266	96.3	2.3e-28	tail completion	connector
eggNOG-mapper	UHGV-1539386_20	1449050.JNLE01000003_gene3885	143.0	4.60046e-42	N/A	N/A
structural_annotation	UHGV-1539386_20	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_21	phrog_556	110.5	5.7e-33	minor head protein	head and packaging
UniRef90	UHGV-1539386_21	UniRef90_UPI00189BC4F9	326.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1539386_21	1449050.JNLE01000003_gene3886	150.0	1.82169e-44	N/A	N/A
Pfam	UHGV-1539386_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1539386_21	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_22	phrog_3366	64.6	1.1e-18	N/A	unknown function
Pfam	UHGV-1539386_22	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1539386_22	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_23	phrog_541	77.2	1.8e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-1539386_23	1449050.JNLE01000003_gene3888	83.2	5.8e-19	N/A	N/A
PHROG	UHGV-1539386_24	phrog_422	235.0	0	major head protein	head and packaging
eggNOG-mapper	UHGV-1539386_24	693746.OBV_18090	385.0	0	N/A	N/A
structural_annotation	UHGV-1539386_24	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_25	phrog_194	102.6	4.4e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-1539386_25	UniRef90_UPI0018995066	342.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1539386_25	742765.HMPREF9457_02126	163.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1539386_25	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1539386_25	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1539386_27	phrog_581	251.4	0	minor head protein	head and packaging
UniRef90	UHGV-1539386_27	UniRef90_UPI001897AC3D	833.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1539386_27	658655.HMPREF0988_02563	324.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1539386_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1539386_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1539386_27	PF06152,TIGR01641	N/A	N/A	N/A	N/A