UHGV-1540632 (vOTU-104523)

Viral Genome: UHGV-1540632

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1540632
vOTU ID	vOTU-104523
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0222410
Associated BioSample	SAMEA2737899
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	73.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	30
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	63.94
Jumbo phage	No

Genome content
Genome length (bp)	27,203
GC content	41.91%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	95%
Average CDS length (bps)	548.17
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1540632_1	phrog_6900	240.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1540632_1	UniRef90_UPI001F130692	416.0	0	tail tape measure protein	N/A
eggNOG-mapper	UHGV-1540632_1	1277892.M1HNU8_9CAUD	475.0	0	N/A	N/A
structural_annotation	UHGV-1540632_1	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_2	phrog_706	179.3	0	N/A	unknown function
UniRef90	UHGV-1540632_2	UniRef90_A0A3R9KJ49	375.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1540632_2	646413.C5IUK2_9CAUD	204.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1540632_2	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1540632_2	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_3	phrog_1061	70.1	3.9e-20	N/A	unknown function
UniRef90	UHGV-1540632_3	UniRef90_A0A150NRZ7	100.0	4.82e-25	N/A	N/A
eggNOG-mapper	UHGV-1540632_3	1035189.HMPREF9954_0315	100.0	8.08e-26	N/A	N/A
structural_annotation	UHGV-1540632_3	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_4	phrog_820	141.7	2.90069e-42	major tail protein	tail
UniRef90	UHGV-1540632_4	UniRef90_A0A380K6S6	204.0	0	Tail shaft protein	N/A
eggNOG-mapper	UHGV-1540632_4	646413.C5IUK0_9CAUD	200.0	0	N/A	N/A
structural_annotation	UHGV-1540632_4	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_5	phrog_913	140.6	5.09933e-42	minor head protein	head and packaging
UniRef90	UHGV-1540632_5	UniRef90_A0A428GXJ9	256.0	0	Minor capsid protein from bacteriophage	N/A
eggNOG-mapper	UHGV-1540632_5	646413.C5IUJ9_9CAUD	163.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1540632_5	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1540632_5	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_6	phrog_556	78.7	6.2e-23	minor head protein	head and packaging
UniRef90	UHGV-1540632_6	UniRef90_A0A3R9KT47	228.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1540632_6	537874.B3GW08_9CAUD	121.0	8.32e-34	Minor capsid protein	N/A
Pfam	UHGV-1540632_6	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1540632_6	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_7	phrog_793	99.3	2.6e-29	head-tail adaptor	connector
UniRef90	UHGV-1540632_7	UniRef90_A0A428GY50	221.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1540632_7	537874.B3GW07_9CAUD	119.0	1.41e-33	Minor capsid protein	N/A
Pfam	UHGV-1540632_7	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1540632_7	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_8	phrog_541	109.4	2.2e-32	head-tail adaptor	connector
UniRef90	UHGV-1540632_8	UniRef90_A0A150NS05	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540632_8	646413.C5IUJ7_9CAUD	151.0	1.4013e-45	N/A	N/A
PHROG	UHGV-1540632_10	phrog_19159	40.3	0.000000000052	N/A	unknown function
UniRef90	UHGV-1540632_10	UniRef90_A0A3G8F7I1	58.2	0.00000000226	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1540632_10	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_11	phrog_422	342.6	0	major head protein	head and packaging
UniRef90	UHGV-1540632_11	UniRef90_A0A4D6ASP8	511.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-1540632_11	537874.B3GW03_9CAUD	531.0	0	N/A	N/A
structural_annotation	UHGV-1540632_11	PF20911	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_12	phrog_2303	172.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1540632_12	UniRef90_A0A150NS01	290.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540632_12	537874.B3GW02_9CAUD	205.0	0	N/A	N/A
PHROG	UHGV-1540632_13	phrog_774	73.5	3.5e-21	N/A	unknown function
UniRef90	UHGV-1540632_13	UniRef90_A0A0B7LQN3	125.0	2.27e-36	N/A	N/A
eggNOG-mapper	UHGV-1540632_13	397290.C810_05225	59.3	0.000000000141	N/A	N/A
PHROG	UHGV-1540632_14	phrog_581	396.4	0	minor head protein	head and packaging
UniRef90	UHGV-1540632_14	UniRef90_A0A4D6A8A0	956.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1540632_14	537874.B3GW01_9CAUD	518.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1540632_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1540632_14	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
structural_annotation	UHGV-1540632_14	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_16	phrog_533	600.0	0	portal protein	head and packaging
UniRef90	UHGV-1540632_16	UniRef90_A0A150NRY8	932.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1540632_16	537874.B3GW00_9CAUD	688.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1540632_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1540632_16	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1540632_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1540632_17	K06909	64.4	1.7e-18	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1540632_17	phrog_29775	386.5	0	N/A	unknown function
UniRef90	UHGV-1540632_17	UniRef90_A0A150NNE4	867.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1540632_17	1214217.ALNF01000014_gene1382	785.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1540632_17	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1540632_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1540632_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1540632_17	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1540632_18	K07474	45.4	0.0000000000019	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1540632_18	phrog_1595	216.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1540632_18	UniRef90_A0A1X1H871	300.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1540632_18	764291.STRUR_2109	233.0	0	N/A	N/A
Pfam	UHGV-1540632_18	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-1540632_18	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_19	phrog_36	83.9	2.2e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1540632_19	UniRef90_A0A0Z8CIW7	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540632_19	1321372.AQQB01000060_gene55	125.0	7.64e-35	N/A	N/A
Pfam	UHGV-1540632_19	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1540632_19	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_20	phrog_2275	141.4	1.90016e-42	N/A	unknown function
UniRef90	UHGV-1540632_20	UniRef90_A0A060QNB6	173.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540632_20	1225805.J7KIX3_9CAUD	99.8	6.5e-26	N/A	N/A
PHROG	UHGV-1540632_21	phrog_121	124.0	9.9e-38	N/A	unknown function
UniRef90	UHGV-1540632_21	UniRef90_UPI000660C114	472.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540632_21	1282664.H354_07590	205.0	0	N/A	N/A
Pfam	UHGV-1540632_21	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1540632_21	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_23	phrog_1313	454.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_23	UniRef90_A0A1X0WN29	875.0	0	Helicase	N/A
eggNOG-mapper	UHGV-1540632_23	1282664.H354_06576	881.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1540632_23	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1540632_23	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1540632_23	PF05272,MF_04000,NF011296,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_24	phrog_695	213.0	0	DNA polymerase/primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_24	UniRef90_UPI000DD9FD64	521.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-1540632_24	1282664.H354_06571	509.0	0	Bifunctional DNA primase/polymerase, N-terminal	N/A
Pfam	UHGV-1540632_24	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-1540632_24	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-1540632_24	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1540632_24	PF09250,PF08708,NF040561,COG4983	N/A	N/A	N/A	N/A
KOfam	UHGV-1540632_25	K03111	160.9	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1540632_25	phrog_44	178.6	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_25	UniRef90_A0A3R9LFK5	249.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1540632_25	1282664.H354_06566	233.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1540632_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1540632_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1540632_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1540632_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1540632_25	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_26	phrog_23177	187.8	0	N/A	unknown function
PHROG	UHGV-1540632_27	phrog_155	148.2	4.48416e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_27	UniRef90_A0A3R9LUG7	393.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-1540632_27	1289595.M1Q0X6_9VIRU	322.0	0	ERF superfamily	N/A
Pfam	UHGV-1540632_27	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1540632_27	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_28	phrog_2486	127.7	4e-38	N/A	unknown function
UniRef90	UHGV-1540632_28	UniRef90_A0A139QHN0	92.0	4.25e-22	N/A	N/A
PHROG	UHGV-1540632_29	phrog_62	84.7	2.5e-25	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_29	UniRef90_A0A2I1YZ54	722.0	0	ResIII domain-containing protein	N/A
Pfam	UHGV-1540632_29	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
structural_annotation	UHGV-1540632_29	PF04851,PF16203,MF_01821,TIGR04095,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_30	phrog_1981	103.1	1.1e-30	N/A	unknown function
UniRef90	UHGV-1540632_30	UniRef90_A0A0U0KQN9	290.0	0	N/A	N/A
structural_annotation	UHGV-1540632_30	PF02075,MF_00034,NF000711,COG0816	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_31	phrog_253	156.9	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_31	UniRef90_A0A0E7DV90	286.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540632_31	1282664.H354_06531	287.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-1540632_31	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1540632_31	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_32	phrog_1891	261.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_32	UniRef90_A0A428GXX7	467.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1540632_32	1282664.H354_06526	409.0	0	HNH endonuclease	N/A
Pfam	UHGV-1540632_32	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1540632_32	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_33	phrog_2044	100.2	9.6e-30	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_33	UniRef90_A0A0T5PNV5	60.8	0.000000000139	Phage-like protein	N/A
eggNOG-mapper	UHGV-1540632_33	1461246.X2KU06_9VIRU	135.0	6.24993e-41	N/A	N/A
structural_annotation	UHGV-1540632_33	NF010673	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_34	phrog_633	133.8	6e-40	transcriptional regulator	transcription regulation
UniRef90	UHGV-1540632_34	UniRef90_A0A139NBC1	183.0	0	Putative phage protein	N/A
structural_annotation	UHGV-1540632_34	PF21715,MF_00732,TIGR04176,COG1510	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_38	phrog_2273	136.4	4.49999e-41	N/A	unknown function
UniRef90	UHGV-1540632_38	UniRef90_U4KJ92	130.0	6.36e-38	N/A	N/A
PHROG	UHGV-1540632_39	phrog_33411	114.4	3.1e-34	N/A	unknown function
PHROG	UHGV-1540632_40	phrog_8019	97.4	6.9e-29	N/A	unknown function
KOfam	UHGV-1540632_41	K07729	45.9	0.0000000000011	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1540632_41	phrog_8	40.3	0.000000000063	transcriptional regulator	transcription regulation
UniRef90	UHGV-1540632_41	UniRef90_A0A0E2P3U1	127.0	2.54e-37	Cro/Cl family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1540632_41	1403946.Q615_SPAC00127G0164	115.0	3.08e-33	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1540632_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1540632_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1540632_41	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_42	phrog_1305	172.2	0	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1540632_42	UniRef90_A0A0E2PJW3	429.0	0	N/A	N/A
eggNOG-mapper	UHGV-1540632_42	1123302.KB904182_gene105	238.0	0	N/A	N/A
Pfam	UHGV-1540632_42	PF13643	N/A	N/A	N/A	DUF4145
structural_annotation	UHGV-1540632_42	PF13643	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_43	phrog_14088	110.1	5.9e-33	N/A	unknown function
UniRef90	UHGV-1540632_43	UniRef90_Q7Y4L8	127.0	3.92e-37	Gp6	N/A
eggNOG-mapper	UHGV-1540632_43	1235802.C823_04730	55.8	0.00000000106	N/A	N/A
PHROG	UHGV-1540632_44	phrog_20440	192.6	0	N/A	unknown function
UniRef90	UHGV-1540632_44	UniRef90_F5VXX3	162.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1540632_44	1005705.HMPREF9967_0945	162.0	0	N/A	N/A
KOfam	UHGV-1540632_45	K01356	89.6	5.5e-26	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1540632_45	phrog_4	163.2	0	transcriptional repressor	transcription regulation
UniRef90	UHGV-1540632_45	UniRef90_E9FJV5	454.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-1540632_45	563038.HMPREF0851_00561	454.0	0	Peptidase S24-like	N/A
Pfam	UHGV-1540632_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-1540632_45	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1540632_45	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-1540632_45	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-1540632_46	phrog_9320	150.6	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1540632_46	UniRef90_A0A150NL19	75.9	7.3e-17	N/A	N/A
KOfam	UHGV-1540632_47	K14059	180.6	0	int; integrase	N/A
PHROG	UHGV-1540632_47	phrog_1	199.8	0	integrase	integration and excision
UniRef90	UHGV-1540632_47	UniRef90_UPI0011F3E466	731.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1540632_47	1282664.H354_06481	570.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1540632_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1540632_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1540632_47	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A