UHGV-1542337 (vOTU-069473)

Viral Genome: UHGV-1542337

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1542337
vOTU ID	vOTU-069473
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0248866
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.83 (High-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	3.17
Jumbo phage	No

Genome content
Genome length (bp)	35,044
GC content	58.55%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	94%
Average CDS length (bps)	684.69
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1542337_2	phrog_38832	49.2	0.000000000000023	N/A	unknown function
eggNOG-mapper	UHGV-1542337_2	665956.HMPREF1032_00143	57.0	0.0000000891	N/A	N/A
structural_annotation	UHGV-1542337_2	PF10781	N/A	N/A	N/A	N/A
UniRef90	UHGV-1542337_3	UniRef90_R6QWY1	104.0	1.71e-26	28	N/A
KOfam	UHGV-1542337_9	K02647	43.9	0.0000000000027	cdaR; carbohydrate diacid regulator	N/A
UniRef90	UHGV-1542337_9	UniRef90_K1SN71	117.0	3.93e-33	HTH_30 domain-containing protein	N/A
Pfam	UHGV-1542337_9	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-1542337_9	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-1542337_9	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-1542337_10	UniRef90_UPI001C037734	68.9	0.0000000000000553	LuxR C-terminal-related transcriptional regulator	N/A
structural_annotation	UHGV-1542337_10	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-1542337_14	UniRef90_A0A810QFN4	1084.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1542337_14	693746.OBV_01590	702.0	0	N/A	N/A
Pfam	UHGV-1542337_14	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
eggNOG-mapper	UHGV-1542337_15	693746.OBV_01600	170.0	9.80909e-44	N/A	N/A
KOfam	UHGV-1542337_16	K08640	95.0	1.3e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1542337_16	phrog_18955	154.8	0	N/A	unknown function
UniRef90	UHGV-1542337_16	UniRef90_UPI001C035E39	630.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-1542337_16	1235797.C816_04171	334.0	0	Peptidase M15	N/A
Pfam	UHGV-1542337_16	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-1542337_16	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1542337_16	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1542337_16	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_17	phrog_199	90.3	2e-26	holin	lysis
UniRef90	UHGV-1542337_17	UniRef90_K1UL76	298.0	0	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-1542337_17	411467.BACCAP_00280	143.0	6.61973e-42	Bacteriophage holin family	N/A
Pfam	UHGV-1542337_17	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1542337_17	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1542337_17	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1542337_17	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_19	phrog_13256	71.9	5e-21	N/A	unknown function
eggNOG-mapper	UHGV-1542337_19	1226322.HMPREF1545_00132	71.2	0.00000000000000135	N/A	N/A
PHROG	UHGV-1542337_20	phrog_1863	63.6	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1542337_20	748224.HMPREF9436_01412	99.0	1.99e-26	N/A	N/A
eggNOG-mapper	UHGV-1542337_22	657322.FPR_21910	55.5	0.000000124	N/A	N/A
PHROG	UHGV-1542337_24	phrog_18725	90.2	1.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1542337_24	693746.OBV_18220	97.1	7.78e-23	N/A	N/A
structural_annotation	UHGV-1542337_24	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-1542337_25	K01361	56.6	1.6e-16	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-1542337_25	phrog_11157	234.8	0	N/A	unknown function
UniRef90	UHGV-1542337_25	UniRef90_UPI001C10C6DC	385.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1542337_25	1232446.BAIE02000011_gene1582	286.0	0	N/A	N/A
Pfam	UHGV-1542337_25	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-1542337_25	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-1542337_25	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1542337_25	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_27	phrog_13879	511.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1542337_27	1235797.C816_02659	730.0	0	N/A	N/A
structural_annotation	UHGV-1542337_27	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1542337_28	1235797.C816_02660	103.0	7.73e-27	N/A	N/A
structural_annotation	UHGV-1542337_28	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1542337_29	K10398	43.4	0.0000000000022	KIF11, EG5; kinesin family member 11	N/A
PHROG	UHGV-1542337_29	phrog_6900	258.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1542337_29	UniRef90_A0A1E3BXP9	325.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1542337_29	1216932.CM240_0625	330.0	0	tape measure	N/A
COG	UHGV-1542337_29	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1542337_29	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_31	phrog_2115	40.4	0.000000000057	tail protein	tail
eggNOG-mapper	UHGV-1542337_31	665950.HMPREF1025_02659	62.8	0.0000000000696	N/A	N/A
structural_annotation	UHGV-1542337_31	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_32	phrog_88	122.1	3e-36	major tail protein	tail
UniRef90	UHGV-1542337_32	UniRef90_UPI0018771F27	288.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1542337_32	33035.JPJF01000039_gene278	136.0	1.02e-37	N/A	N/A
NCBIFam	UHGV-1542337_32	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1542337_32	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1542337_33	UniRef90_R6UNR2	129.0	4.78e-35	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1542337_33	908340.HMPREF9406_2573	129.0	8.01e-36	N/A	N/A
structural_annotation	UHGV-1542337_33	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1542337_34	999413.HMPREF1094_02005	85.1	4.04e-20	N/A	N/A
structural_annotation	UHGV-1542337_34	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_35	phrog_19734	147.1	5.04467e-44	N/A	unknown function
UniRef90	UHGV-1542337_35	UniRef90_A0A6I7GNS7	169.0	0	Phage head closure protein	N/A
eggNOG-mapper	UHGV-1542337_35	349161.Dred_2602	103.0	7.76e-27	N/A	N/A
structural_annotation	UHGV-1542337_35	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_36	phrog_749	71.4	9.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-1542337_36	86416.Clopa_0342	82.8	3.46e-19	N/A	N/A
PHROG	UHGV-1542337_37	phrog_10	145.1	5.80138e-43	major head protein	head and packaging
UniRef90	UHGV-1542337_37	UniRef90_G9YSC0	723.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1542337_37	1235792.C808_00086	443.0	0	Phage capsid family	N/A
Pfam	UHGV-1542337_37	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1542337_37	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1542337_37	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1542337_37	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1542337_37	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1542337_38	K01358	141.1	9.99967e-42	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1542337_38	phrog_94	253.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1542337_38	UniRef90_A0A1Y4BT12	363.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1542337_38	349161.Dred_2605	275.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1542337_38	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1542337_38	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1542337_38	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_39	phrog_12	111.8	4.2e-33	portal protein	head and packaging
UniRef90	UHGV-1542337_39	UniRef90_G9YSB8	535.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1542337_39	610130.Closa_0742	300.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1542337_39	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1542337_39	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1542337_39	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1542337_39	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_40	phrog_9	244.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1542337_40	UniRef90_UPI0018737C02	929.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1542337_40	1235792.C808_00083	618.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1542337_40	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1542337_40	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1542337_40	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_41	phrog_5110	56.3	4.1e-16	terminase small subunit	head and packaging
UniRef90	UHGV-1542337_41	UniRef90_UPI00195E8788	132.0	8.59e-38	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1542337_41	202752.JL53_00755	50.4	0.00000214	Phage terminase, small subunit	N/A
Pfam	UHGV-1542337_41	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1542337_41	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1542337_42	phrog_119	80.4	2.3e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1542337_42	UniRef90_G9YSB5	162.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1542337_42	574375.BAGA_00230	86.7	1.75e-20	HNH endonuclease	N/A
Pfam	UHGV-1542337_42	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1542337_42	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1542337_43	phrog_3584	73.8	2.3e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1542337_43	693746.OBV_19950	315.0	0	N/A	N/A
structural_annotation	UHGV-1542337_43	PF05840	N/A	N/A	N/A	N/A
KOfam	UHGV-1542337_46	K03111	140.8	1.49995e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1542337_46	phrog_44	135.5	3.5e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1542337_46	UniRef90_UPI001C02B0E9	241.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1542337_46	693746.OBV_12860	200.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1542337_46	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1542337_46	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1542337_46	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1542337_46	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1542337_46	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1542337_48	K03497	64.8	5.5e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1542337_48	phrog_27290	453.6	0	N/A	unknown function
UniRef90	UHGV-1542337_48	UniRef90_UPI001C029D7C	843.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1542337_48	742738.HMPREF9460_00856	331.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1542337_48	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1542337_48	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1542337_48	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A