UHGV-1544614 (vOTU-075781)

Viral Genome: UHGV-1544614

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1544614
vOTU ID	vOTU-075781
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0264343
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.23 (High-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.39
Jumbo phage	No

Genome content
Genome length (bp)	31,107
GC content	41.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	95%
Average CDS length (bps)	600.31
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.23)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1544614_1	K08309	54.7	0.000000000000002	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-1544614_1	phrog_19890	100.1	2.1e-29	N/A	unknown function
UniRef90	UHGV-1544614_1	UniRef90_A0A4Q7PUD7	105.0	3.83e-25	Transglycosylase-like protein with SLT domain	N/A
eggNOG-mapper	UHGV-1544614_1	411468.CLOSCI_01470	91.7	2.68e-20	Transglycosylase SLT domain	N/A
Pfam	UHGV-1544614_1	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1544614_1	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1544614_1	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_4	phrog_7566	68.2	9.4e-20	N/A	unknown function
KOfam	UHGV-1544614_5	K03111	97.1	2.8e-28	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1544614_5	phrog_44	99.8	3.3e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1544614_5	UniRef90_W2BYN3	130.0	1.34e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1544614_5	1161902.HMPREF0378_1713	130.0	2.24e-37	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1544614_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1544614_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1544614_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1544614_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1544614_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1544614_7	K00558	221.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1544614_7	phrog_116	249.9	0	DNA methyltransferase	other
UniRef90	UHGV-1544614_7	UniRef90_A0A1C5MBD4	569.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1544614_7	1499683.CCFF01000017_gene2594	415.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1544614_7	MTase_II_00072	164.7	0	Type II methyltransferase	RM
Pfam	UHGV-1544614_7	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1544614_7	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1544614_7	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1544614_7	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_9	phrog_25754	62.2	4.9e-18	N/A	unknown function
structural_annotation	UHGV-1544614_9	PF18195,MF_00257,NF041655,COG1923	N/A	N/A	N/A	N/A
KOfam	UHGV-1544614_10	K06223	97.8	1.6e-28	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1544614_10	phrog_56	86.7	4.2e-25	DNA methyltransferase	other
UniRef90	UHGV-1544614_10	UniRef90_A0A381I6J7	87.4	1.14e-20	D12 class N6 adenine-specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1544614_10	1321814.HMPREF9089_00914	132.0	1.63e-37	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1544614_10	MTase_II_00030	89.0	9.7e-26	Type II methyltransferase	RM
Pfam	UHGV-1544614_10	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1544614_10	COG0338	N/A	N/A	DNA-adenine methylase	N/A
KOfam	UHGV-1544614_11	K06223	57.8	2.2e-16	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1544614_11	phrog_1996	83.2	2.9e-24	DNA methyltransferase	other
UniRef90	UHGV-1544614_11	UniRef90_A0A1I0K783	104.0	1.71e-26	D12 class N6 adenine-specific DNA methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-1544614_11	1321814.HMPREF9089_00914	123.0	2.33e-33	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1544614_11	MTase_II_00030	77.2	3.6e-22	Type II methyltransferase	RM
Pfam	UHGV-1544614_11	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1544614_11	COG0338	N/A	N/A	DNA-adenine methylase	N/A
PHROG	UHGV-1544614_12	phrog_98	96.2	2.7e-28	N/A	unknown function
UniRef90	UHGV-1544614_12	UniRef90_UPI001AA1AFE8	95.5	1.79e-22	YopX family protein	N/A
eggNOG-mapper	UHGV-1544614_12	945021.TEH_08480	77.0	4.13e-16	YopX protein	N/A
Pfam	UHGV-1544614_12	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1544614_12	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1544614_12	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_13	phrog_3782	113.8	3.3e-34	N/A	unknown function
UniRef90	UHGV-1544614_13	UniRef90_C0CKU0	109.0	1.01e-29	N/A	N/A
eggNOG-mapper	UHGV-1544614_13	476272.RUMHYD_01460	109.0	1.69e-30	N/A	N/A
Pfam	UHGV-1544614_13	PF14192	N/A	N/A	N/A	DUF4314
COG	UHGV-1544614_13	COG2105	N/A	N/A	Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family	N/A
structural_annotation	UHGV-1544614_13	PF14192,MF_00754,NF003018	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_15	phrog_5781	68.1	1.2e-19	N/A	unknown function
UniRef90	UHGV-1544614_15	UniRef90_A0A1C5VVJ6	77.4	4.27e-16	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-1544614_15	573061.Clocel_3558	75.9	3.45e-16	N/A	N/A
Pfam	UHGV-1544614_15	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1544614_15	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1544614_15	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_16	phrog_25385	58.8	8.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-1544614_16	411468.CLOSCI_00565	61.6	0.0000000000874	N/A	N/A
PHROG	UHGV-1544614_17	phrog_3584	162.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1544614_17	936375.HMPREF1152_0670	226.0	0	N/A	N/A
structural_annotation	UHGV-1544614_17	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_18	phrog_11237	85.4	6.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1544614_18	875454.BAEW01000017_gene1604	117.0	3.06e-32	N/A	N/A
structural_annotation	UHGV-1544614_18	TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1544614_19	K03497	59.9	6.6e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1544614_19	phrog_498	280.2	0	DNA methyltransferase	other
UniRef90	UHGV-1544614_19	UniRef90_UPI000421E477	263.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1544614_19	1216932.CM240_0613	262.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1544614_19	MTase_II_00015	252.4	0	Type II methyltransferase	RM
Pfam	UHGV-1544614_19	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1544614_19	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1544614_19	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1544614_19	PF02195,PF10354,MF_02015,TIGR04285,NF010253,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1544614_20	K00571	82.4	7.1e-24	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1544614_20	phrog_498	121.0	1.5e-35	DNA methyltransferase	other
UniRef90	UHGV-1544614_20	UniRef90_UPI000AB7E165	119.0	5.28e-33	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1544614_20	1437824.BN940_02906	111.0	4.49e-28	DNA methylase	N/A
PADLOC	UHGV-1544614_20	MTase_II_00015	120.7	2.3e-35	Type II methyltransferase	RM
Pfam	UHGV-1544614_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1544614_20	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1544614_20	TIGR02469,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_21	phrog_309	191.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-1544614_21	UniRef90_A0A6N9QIP1	185.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1544614_21	742740.HMPREF9474_02359	171.0	0	transposase activity	N/A
COG	UHGV-1544614_21	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1544614_21	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-1544614_22	K06909	87.9	1.5e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1544614_22	phrog_2	76.0	7.4e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1544614_22	UniRef90_A0A139R8G3	660.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1544614_22	1282664.H354_06621	660.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1544614_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1544614_22	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_23	phrog_533	271.8	0	portal protein	head and packaging
UniRef90	UHGV-1544614_23	UniRef90_A0A6I3IQZ0	662.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1544614_23	1282664.H354_06626	618.0	0	N/A	N/A
structural_annotation	UHGV-1544614_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_24	phrog_25639	69.5	3e-20	N/A	unknown function
eggNOG-mapper	UHGV-1544614_24	1282664.H354_06631	79.3	1.47e-18	N/A	N/A
PHROG	UHGV-1544614_25	phrog_581	235.1	0	minor head protein	head and packaging
UniRef90	UHGV-1544614_25	UniRef90_A0A414EGE0	405.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1544614_25	33035.JPJF01000093_gene2255	357.0	0	N/A	N/A
Pfam	UHGV-1544614_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1544614_25	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1544614_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_27	phrog_774	63.5	3.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1544614_27	397290.C810_05225	70.5	0.0000000000000358	N/A	N/A
PHROG	UHGV-1544614_28	phrog_918	95.6	2.7e-28	N/A	unknown function
UniRef90	UHGV-1544614_28	UniRef90_UPI001C1095C9	132.0	1.7e-38	N/A	N/A
eggNOG-mapper	UHGV-1544614_28	1140001.I571_01827	83.6	6.75e-20	N/A	N/A
Pfam	UHGV-1544614_28	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1544614_28	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_29	phrog_2303	124.5	9.7e-37	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1544614_29	1282664.H354_06656	154.0	1.26117e-44	N/A	N/A
PHROG	UHGV-1544614_30	phrog_422	348.3	0	major head protein	head and packaging
UniRef90	UHGV-1544614_30	UniRef90_UPI00115A6E07	435.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1544614_30	394503.Ccel_3291	433.0	0	N/A	N/A
structural_annotation	UHGV-1544614_30	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_31	phrog_1378	54.5	0.0000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-1544614_31	1391647.AVSV01000003_gene1809	50.1	0.000000721	N/A	N/A
PHROG	UHGV-1544614_32	phrog_541	91.0	1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-1544614_32	483218.BACPEC_01153	150.0	2.8026e-45	N/A	N/A
PHROG	UHGV-1544614_33	phrog_8710	128.0	3.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-1544614_33	33035.JPJF01000093_gene2249	138.0	5.24996e-41	N/A	N/A
structural_annotation	UHGV-1544614_33	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_34	phrog_556	48.7	0.00000000000013	minor head protein	head and packaging
eggNOG-mapper	UHGV-1544614_34	742740.HMPREF9474_03509	144.0	6.53005e-43	N/A	N/A
PHROG	UHGV-1544614_35	phrog_2595	80.4	1.9e-23	head-tail connector protein	connector
UniRef90	UHGV-1544614_35	UniRef90_UPI001D0627B3	121.0	6.74e-33	minor capsid protein	N/A
eggNOG-mapper	UHGV-1544614_35	1282664.H354_06686	179.0	0	N/A	N/A
Pfam	UHGV-1544614_35	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1544614_35	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_36	phrog_820	118.0	5.3e-35	major tail protein	tail
eggNOG-mapper	UHGV-1544614_36	1282664.H354_06691	236.0	0	N/A	N/A
structural_annotation	UHGV-1544614_36	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_38	phrog_8300	98.1	5.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1544614_38	33035.JPJF01000093_gene2245	98.6	1.12e-25	N/A	N/A
structural_annotation	UHGV-1544614_38	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_39	phrog_8355	105.1	2.1e-31	N/A	unknown function
UniRef90	UHGV-1544614_39	UniRef90_UPI001924D062	140.0	1.79002e-41	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1544614_39	1282664.H354_06706	117.0	1.34e-33	N/A	N/A
Pfam	UHGV-1544614_39	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-1544614_40	phrog_1535	438.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1544614_40	UniRef90_A0A139R8H3	642.0	0	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1544614_40	1282664.H354_06711	635.0	0	Phage-related minor tail protein	N/A
COG	UHGV-1544614_40	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1544614_40	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_41	phrog_1194	69.6	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1544614_41	1282664.H354_06716	134.0	2.39e-39	N/A	N/A
structural_annotation	UHGV-1544614_41	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_42	phrog_9680	164.9	0	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1544614_42	UniRef90_UPI0018E9B800	499.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1544614_42	1282664.H354_06721	499.0	0	outer membrane autotransporter barrel domain protein	N/A
COG	UHGV-1544614_42	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
PHROG	UHGV-1544614_43	phrog_372	231.2	0	tail protein	tail
UniRef90	UHGV-1544614_43	UniRef90_UPI001EE154D9	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-1544614_43	658659.HMPREF0983_03294	154.0	1.42e-38	N/A	N/A
Pfam	UHGV-1544614_43	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1544614_43	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1544614_43	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
Pfam	UHGV-1544614_44	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1544614_44	PF11314,PF14600,PF02839	N/A	N/A	N/A	N/A
PHROG	UHGV-1544614_45	phrog_4105	88.4	5.9e-26	N/A	unknown function
UniRef90	UHGV-1544614_45	UniRef90_A0A8D9UHA9	92.4	2.35e-22	Holin protein	N/A
eggNOG-mapper	UHGV-1544614_45	1321782.HMPREF1986_02281	62.8	0.0000000000333	N/A	N/A
PHROG	UHGV-1544614_46	phrog_881	74.7	7.7e-22	holin	lysis
UniRef90	UHGV-1544614_46	UniRef90_A0A4Q7P349	88.2	1.36e-21	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-1544614_46	742740.HMPREF9474_02251	89.0	1.22e-22	Putative phage holin Dp-1	N/A
Pfam	UHGV-1544614_46	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1544614_46	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-1544614_47	K07273	161.5	0	acm; lysozyme	N/A
PHROG	UHGV-1544614_47	phrog_291	144.6	7.80523e-43	endolysin	lysis
UniRef90	UHGV-1544614_47	UniRef90_A0A8D9UIP9	214.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1544614_47	938289.CAJN020000007_gene311	182.0	0	Pfam:Cpl-7	N/A
Pfam	UHGV-1544614_47	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1544614_47	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1544614_47	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1544614_49	K07726	44.7	0.0000000000024	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-1544614_49	phrog_8898	44.4	0.0000000000019	N/A	unknown function
UniRef90	UHGV-1544614_49	UniRef90_X8K760	83.2	1.48e-19	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1544614_49	888727.HMPREF9092_1413	83.2	2.48e-20	Helix-turn-helix	N/A
Pfam	UHGV-1544614_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1544614_49	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1544614_49	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A