UHGV-1555160 (vOTU-069929)

Viral Genome: UHGV-1555160

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1555160
vOTU ID	vOTU-069929
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0241172
Associated BioSample	SAMEA4431968
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	91.1 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9774
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.71
Jumbo phage	No

Genome content
Genome length (bp)	32,300
GC content	57.19%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	90%
Average CDS length (bps)	545.94
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1555160_1	phrog_1129	62.6	5e-18	holin	lysis
UniRef90	UHGV-1555160_1	UniRef90_A0A367FT42	166.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1555160_1	1007096.BAGW01000036_gene2663	110.0	1.03e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1555160_1	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1555160_1	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_2	phrog_4105	96.7	1.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-1555160_2	657322.FPR_27220	150.0	0	N/A	N/A
PHROG	UHGV-1555160_3	phrog_355	59.2	6.4e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1555160_3	UniRef90_UPI00156F0E9C	131.0	1.22e-37	N/A	N/A
eggNOG-mapper	UHGV-1555160_3	411473.RUMCAL_00360	125.0	2.33e-36	N/A	N/A
structural_annotation	UHGV-1555160_3	PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-1555160_4	K07273	185.5	0	acm; lysozyme	N/A
PHROG	UHGV-1555160_4	phrog_291	157.2	0	endolysin	lysis
UniRef90	UHGV-1555160_4	UniRef90_A0A367G061	541.0	0	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1555160_4	411471.SUBVAR_06927	321.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1555160_4	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-1555160_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1555160_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1555160_4	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_5	phrog_24267	58.0	2.2e-16	N/A	unknown function
UniRef90	UHGV-1555160_5	UniRef90_G4Q8U0	65.1	0.00000000576	Side tail fiber protein from lambdoid prophage Rac	N/A
eggNOG-mapper	UHGV-1555160_5	508419.F8J176_9CAUD	113.0	1.34e-25	peptidoglycan catabolic process	N/A
Pfam	UHGV-1555160_5	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
Pfam	UHGV-1555160_5	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
PHROG	UHGV-1555160_6	phrog_19111	50.8	0.000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-1555160_6	1232443.BAIA02000078_gene14	80.1	0.0000000000000164	nuclear chromosome segregation	N/A
COG	UHGV-1555160_6	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1555160_8	phrog_13589	174.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1555160_8	428125.CLOLEP_01434	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-1555160_9	428125.CLOLEP_01433	53.5	0.0000000341	N/A	N/A
structural_annotation	UHGV-1555160_10	PF12245	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_12	phrog_18444	82.0	4.3e-24	N/A	unknown function
UniRef90	UHGV-1555160_12	UniRef90_UPI00156E9A45	59.7	0.000000000177	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-1555160_12	1294142.CINTURNW_1707	61.2	0.00000000000729	N/A	N/A
PHROG	UHGV-1555160_13	phrog_18190	72.6	1.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-1555160_13	411471.SUBVAR_06932	304.0	0	N/A	N/A
structural_annotation	UHGV-1555160_13	PF05954,PF00629,PF03424,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_14	phrog_1194	41.8	0.000000000015	N/A	unknown function
eggNOG-mapper	UHGV-1555160_14	411471.SUBVAR_06933	103.0	7.69e-27	N/A	N/A
structural_annotation	UHGV-1555160_14	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_15	phrog_6900	255.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1555160_15	UniRef90_A0A1C5MMN2	387.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1555160_15	1280698.AUJS01000007_gene1047	377.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1555160_15	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1555160_15	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_16	phrog_1633	71.1	7.9e-21	N/A	unknown function
UniRef90	UHGV-1555160_16	UniRef90_UPI000986795C	73.6	0.0000000000000179	N/A	N/A
eggNOG-mapper	UHGV-1555160_16	883110.HMPREF9260_00651	67.8	0.000000000000538	N/A	N/A
structural_annotation	UHGV-1555160_16	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_17	phrog_1526	82.2	4.6e-24	N/A	unknown function
UniRef90	UHGV-1555160_17	UniRef90_D2BQF7	67.8	0.000000000000607	N/A	N/A
eggNOG-mapper	UHGV-1555160_17	879308.HMPREF9130_1240	80.5	1.24e-18	N/A	N/A
PHROG	UHGV-1555160_18	phrog_117	178.5	0	major tail protein	tail
UniRef90	UHGV-1555160_18	UniRef90_A0A1Q6T308	234.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1555160_18	748224.HMPREF9436_00696	217.0	0	domain, Protein	N/A
COG	UHGV-1555160_18	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1555160_18	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_19	phrog_123	62.8	6.3e-18	tail terminator	connector
UniRef90	UHGV-1555160_19	UniRef90_A0A2A5RIK6	85.1	3.81e-19	N/A	N/A
eggNOG-mapper	UHGV-1555160_19	938278.CAJO01000051_gene783	87.8	5.58e-21	N/A	N/A
structural_annotation	UHGV-1555160_19	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_20	phrog_387	60.3	2.7e-17	neck protein	connector
eggNOG-mapper	UHGV-1555160_20	748224.HMPREF9436_00694	94.0	4.44e-24	N/A	N/A
PHROG	UHGV-1555160_21	phrog_501	70.9	1.9e-20	head closure Hc1	connector
eggNOG-mapper	UHGV-1555160_21	748224.HMPREF9436_00693	169.0	0	N/A	N/A
structural_annotation	UHGV-1555160_21	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_22	phrog_137	56.5	3.6e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-1555160_22	UniRef90_E2ZGA8	158.0	0	Phage protein Gp19/Gp15/Gp42	N/A
structural_annotation	UHGV-1555160_22	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_24	phrog_10	140.9	1.19993e-41	major head protein	head and packaging
UniRef90	UHGV-1555160_24	UniRef90_A0A1Y4TJU9	517.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1555160_24	748224.HMPREF9436_00690	449.0	0	Phage capsid family	N/A
Pfam	UHGV-1555160_24	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1555160_24	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1555160_24	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1555160_24	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_25	phrog_194	84.4	1.8e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-1555160_25	UniRef90_D4K444	162.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1555160_25	748224.HMPREF9436_03336	163.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1555160_25	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1555160_25	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_28	phrog_193	124.5	7e-37	head maturation protease	head and packaging
UniRef90	UHGV-1555160_28	UniRef90_A0A6N8H118	341.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1555160_28	748224.HMPREF9436_01469	389.0	0	N/A	N/A
COG	UHGV-1555160_28	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-1555160_29	phrog_104	214.3	0	portal protein	head and packaging
UniRef90	UHGV-1555160_29	UniRef90_A0A3E2U200	741.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1555160_29	748224.HMPREF9436_01468	756.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1555160_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1555160_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_30	phrog_9	138.8	4.30002e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1555160_30	UniRef90_UPI001D0087E2	460.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1555160_30	1410630.JNKP01000001_gene1822	629.0	0	phage terminase, large subunit	N/A
COG	UHGV-1555160_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1555160_30	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1555160_31	phrog_1066	57.7	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1555160_31	445975.COLSTE_02166	77.0	3.98e-16	N/A	N/A
AcrCatalog	UHGV-1555160_31	cluster_154855	71.2	2.68e-18	NA	N/A
PHROG	UHGV-1555160_32	phrog_338	60.7	3.1e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1555160_32	UniRef90_UPI0015F33F36	174.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1555160_32	748224.HMPREF9436_01465	175.0	0	N/A	N/A
eggNOG-mapper	UHGV-1555160_34	693746.OBV_18010	75.9	0.00000000000000354	N/A	N/A
structural_annotation	UHGV-1555160_34	TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1555160_35	K07319	50.5	0.000000000000028	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1555160_35	phrog_23224	65.5	1.2e-20	DNA methyltransferase	other
UniRef90	UHGV-1555160_35	UniRef90_A0A8D9PDC5	207.0	0	Adenine specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1555160_35	1268240.ATFI01000007_gene431	143.0	1.72e-40	DNA methylase	N/A
PADLOC	UHGV-1555160_35	MTase_II_00172	118.7	7.3e-35	Type II methyltransferase	RM
Pfam	UHGV-1555160_35	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1555160_35	COG0863	N/A	N/A	DNA modification methylase	N/A
PHROG	UHGV-1555160_36	phrog_3584	207.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1555160_36	UniRef90_UPI001C02C5E0	158.0	2.42425e-43	N/A	N/A
eggNOG-mapper	UHGV-1555160_36	318464.IO99_13830	141.0	7.59e-38	N/A	N/A
structural_annotation	UHGV-1555160_36	PF01446	N/A	N/A	N/A	N/A
KOfam	UHGV-1555160_50	K22300	58.9	1.2e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1555160_50	phrog_8	50.4	0.000000000000046	transcriptional regulator	transcription regulation
UniRef90	UHGV-1555160_50	UniRef90_E2ZI88	101.0	1.13e-24	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1555160_50	748224.HMPREF9436_01379	101.0	1.89e-25	N/A	N/A
Pfam	UHGV-1555160_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1555160_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1555160_51	phrog_22683	148.5	8.40779e-45	N/A	unknown function
UniRef90	UHGV-1555160_51	UniRef90_A0A3E2U205	146.0	4.62428e-44	N/A	N/A
eggNOG-mapper	UHGV-1555160_51	482234.SCAZ3_03515	133.0	8.42e-40	N/A	N/A
AcrCatalog	UHGV-1555160_51	cluster_3962	123.0	3.21e-40	NA	N/A
Pfam	UHGV-1555160_51	PF13783	N/A	N/A	N/A	DUF4177
structural_annotation	UHGV-1555160_51	PF13783,NF008362,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1555160_52	K06400	386.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1555160_52	phrog_95	369.0	0	integrase	integration and excision
UniRef90	UHGV-1555160_52	UniRef90_A0A2V2F5B5	673.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1555160_52	1121468.AUBR01000008_gene2069	299.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1555160_52	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1555160_52	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1555160_52	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1555160_52	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1555160_52	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1555160_53	UniRef90_A0A3D2AGD2	182.0	0	N-acetyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-1555160_53	1392491.JIAE01000001_gene1284	114.0	5.53e-31	Acetyltransferase (GNAT) domain	N/A
Pfam	UHGV-1555160_53	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
COG	UHGV-1555160_53	COG1247	N/A	N/A	L-amino acid N-acyltransferase MnaT	N/A