UHGV-1590515 (vOTU-107347)

Viral Genome: UHGV-1590515

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1590515
vOTU ID	vOTU-107347
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0128807
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.77 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.76
Jumbo phage	No

Genome content
Genome length (bp)	18,083
GC content	45.12%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	23
CDS density	96%
Average CDS length (bps)	753.13
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1590515_1	K01358	126.3	3.3e-37	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1590515_1	phrog_94	198.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1590515_1	UniRef90_A0A0Z8MKB7	211.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1590515_1	1123315.AUIP01000014_gene1950	213.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1590515_1	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1590515_1	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1590515_1	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1590515_2	phrog_10	109.1	4.8e-32	major head protein	head and packaging
UniRef90	UHGV-1590515_2	UniRef90_A0A1X1IFB8	575.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1590515_2	1123315.AUIP01000014_gene1951	508.0	0	Phage capsid family	N/A
Pfam	UHGV-1590515_2	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1590515_2	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1590515_2	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1590515_2	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-1590515_3	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
PHROG	UHGV-1590515_4	phrog_749	72.3	5.7e-21	N/A	unknown function
UniRef90	UHGV-1590515_4	UniRef90_A0A0M9FH44	95.1	1.38e-23	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1590515_4	1123315.AUIP01000014_gene1953	94.0	6.6e-24	N/A	N/A
Pfam	UHGV-1590515_4	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1590515_4	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1590515_4	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1590515_5	phrog_5635	99.7	2.3e-29	head-tail adaptor	connector
UniRef90	UHGV-1590515_5	UniRef90_UPI0013DE67E4	105.0	8.84e-27	phage head closure protein	N/A
eggNOG-mapper	UHGV-1590515_5	936140.AEOT01000014_gene1359	80.1	9.22e-18	N/A	N/A
Pfam	UHGV-1590515_5	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1590515_5	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1590515_6	1423775.BAMN01000009_gene392	85.5	9.19e-20	N/A	N/A
PHROG	UHGV-1590515_7	phrog_5509	144.0	4.69435e-43	neck protein	connector
UniRef90	UHGV-1590515_7	UniRef90_W7CX35	91.3	6.1e-21	Gp9 protein	N/A
eggNOG-mapper	UHGV-1590515_7	1123315.AUIP01000014_gene1956	160.0	0	N/A	N/A
structural_annotation	UHGV-1590515_7	TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1590515_8	UniRef90_A0A4D6A254	248.0	0	Structural component	N/A
eggNOG-mapper	UHGV-1590515_8	1123315.AUIP01000014_gene1957	239.0	0	N/A	N/A
structural_annotation	UHGV-1590515_8	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1590515_9	phrog_5802	47.5	0.00000000000027	N/A	unknown function
eggNOG-mapper	UHGV-1590515_9	1423775.BAMN01000009_gene389	53.9	0.000000208	N/A	N/A
KOfam	UHGV-1590515_10	K10421	40.3	0.00000000002	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1590515_10	phrog_58	303.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1590515_10	UniRef90_A0A4D6B1B7	506.0	0	Tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1590515_10	644007.C5J971_9CAUD	493.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1590515_10	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1590515_10	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1590515_10	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1590515_11	phrog_33	79.8	6.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-1590515_11	UniRef90_UPI0004091B89	244.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1590515_11	543734.LCABL_09950	93.6	2.48e-20	phage tail	N/A
COG	UHGV-1590515_11	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1590515_11	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1590515_12	phrog_1067	307.8	0	minor head protein	head and packaging
UniRef90	UHGV-1590515_12	UniRef90_A0A4D6A7D7	465.0	0	Endopeptidase	N/A
eggNOG-mapper	UHGV-1590515_12	1139219.I569_00242	275.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1590515_12	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1590515_12	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1590515_12	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1590515_12	PF14594,PF13620,TIGR01665,TIGR04183,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1590515_14	phrog_1210	149.7	5.60519e-45	PblB-type receptor binding	other
UniRef90	UHGV-1590515_14	UniRef90_A0A4J1ZTG7	164.0	2.23998e-41	PblB	N/A
eggNOG-mapper	UHGV-1590515_14	1035189.HMPREF9954_1922	155.0	1.24e-37	Chaperone of endosialidase	N/A
Pfam	UHGV-1590515_14	PF07902	N/A	N/A	gp58-like protein	Gp58
Pfam	UHGV-1590515_14	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1590515_14	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1590515_18	phrog_1296	80.4	1.3e-23	holin	lysis
PHROG	UHGV-1590515_19	phrog_33625	81.3	6.3e-24	holin	lysis
UniRef90	UHGV-1590515_19	UniRef90_W1Q2L7	174.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1590515_19	592010.GCWU000182_001503	174.0	0	Bacteriophage holin	N/A
Pfam	UHGV-1590515_19	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1590515_19	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1590515_19	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1590515_19	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1590515_20	K02395	92.7	6e-27	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1590515_20	phrog_12727	186.0	0	endolysin	lysis
UniRef90	UHGV-1590515_20	UniRef90_A0A4Y9IW50	211.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1590515_20	1462527.CCDM010000010_gene543	197.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1590515_20	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-1590515_20	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1590515_20	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1590515_20	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A